Branchiostoma floridae (Florida lancelet): 118430895
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Entry
118430895 CDS
T01074
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118430895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118430895
03012 Translation factors [BR:
bfo03012
]
118430895
Enzymes [BR:
bfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118430895
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118430895
Translation factors [BR:
bfo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
118430895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
nSTAND3
AAA_22
ATPase
AAA_14
AAA_23
NPHP3_N
NACHT
AAA_19
ABC_tran
ATPase_2
Sigma54_activat
PhoH
TsaE
NB-ARC
T2SSE
AAA_7
Myosin_head
Adeno_IVa2
AAA_16
Motif
Other DBs
NCBI-GeneID:
118430895
NCBI-ProteinID:
XP_035697821
UniProt:
A0A9J7NB53
LinkDB
All DBs
Position
14:3213420..3224257
Genome browser
AA seq
730 aa
AA seq
DB search
MAEGYGGYGGQRGGHGRRGRGGHRGWRGQGQSRSHWSGGGEDQRSFSSGSGGYGGRGRGG
GRGGRRGHPSGLRGKDIGLFYARKSKDREKRERSVVQMDQSQEQHLSQLLTHLRRDDTPA
DRWRDDTPADRWRDDNAPRPQPAGTGQDWFEQDDADSSGSGSSSQRLDSSSQNSSSVPPA
GRNTSGGEKESWAEPETSWADSETSWNDPKELCAGPAAVLPVQTRDEALDSRLKSELDQI
RSSNNQYRRMQEFREKLPSYNMRQELLELIHKNQVVVISGETGCGKTTQVSQFILDDMID
RGQGSLCHVICTQPRRISAVGVADRVASERGERCGEGGSTGYSIRLENKLPRPKGSILYC
TTGIILKRLLSDPYLGGVSHLILDEVHERDLLSDFLTIIVRDLLQNRPDLKLVLMSATLN
ADQFSAYFGNSPMANIPGFTFPVEDLYLEDVLELTRYDPPEAQTKPQRRVYGRKRREEME
ERMEREEEEKQELREYLQTISKRYSWSTLDSLERMDHQNLDLNLTMELIKYIAYNKPDGA
ILVFLPGWDQISKVNDMLGSQGMAKSGKFRIIPLHSMMPTVNQTQVFERPPQGVRKIVLA
TNIAETSITIDDVVYVVDCGQVKEKSFDITNNLATLQPVWISKASAKQRRGRAGRVQPGV
CFHLFSQLKESKMQEYQLPEILRTPLEELCLQIKVCLFVCLFVCLFVESKMQEYQLPEIL
RTPGGALSAD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggatacggaggttacgggggtcaaaggggaggtcacggtcgccgaggtcgg
ggcggccatcgcggctggagaggtcaagggcagtccaggtcacactggtcaggcggtggg
gaagatcagaggagcttttcatcaggttcaggagggtatggaggccggggcaggggaggg
gggcgtggcgggaggagggggcatccctccggtctgagggggaaggacatcgggctgttc
tacgccaggaaaagcaaggacagggagaagagagagcggtcagtggttcagatggaccag
agtcaggaacagcacctgtcccagctgttaactcacctgcgccgggacgacacacctgcg
gacaggtggagggatgacacacctgccgataggtggagggatgacaatgcgccacgccca
cagccggctggaaccggtcaggactggtttgaacaggatgatgcagacagctcaggttca
gggtcctcttcacaaagacttgacagcagcagtcagaactcttcaagtgtcccaccagct
ggtaggaacacctccggtggtgagaaggagtcttgggctgaacccgagacgtcttgggct
gactctgagacgtcttggaatgaccctaaggagctgtgtgcgggtcctgctgctgttctg
ccggtacagaccagggatgaggcgctggactcacggctgaagtcagagctagaccagatc
aggagcagcaacaaccagtacaggaggatgcaggaattccgtgaaaagctgccatcctac
aacatgagacaggaacttctggagctgatccacaagaaccaggtggtggtcatcagtggg
gagacgggatgtgggaaaactactcaggtgtctcagttcatcttggatgacatgattgac
agaggtcaggggtcactgtgtcatgtgatctgtacccagcccaggagaataagtgctgtt
ggggtggcagacagagtagcatctgagagaggagagagatgtggggaggggggcagcaca
gggtactccatacggctggaaaacaaactgccacgccccaaaggctccatcctctactgc
accacgggcatcatcctcaagagactgctgtctgatccgtacctcggaggagtgtcccac
ctgatcctagatgaggtccatgagagagacctgctgtcagacttcctcaccatcatagtc
agggatctgttgcaaaacagacctgacttaaagctggtcttgatgagtgccaccctgaat
gcagaccagttctcagcttactttggaaactccccaatggccaacatccctggcttcacc
ttccctgtggaggacttatacttggaagatgtcttagaactcaccagatatgacccgcct
gaagcccagaccaagccccagcgcagagtctacggcaggaagagacgggaggagatggaa
gaaaggatggagagagaggaggaggaaaaacaggagctgagggaatatctacaaaccata
tccaaaagatattcctggagtacccttgattctctggagagaatggatcatcagaacctg
gacctgaacttgaccatggagctcatcaagtacattgcctacaacaaacctgatggagct
atcctggtgttcctgcctggctgggaccagatcagtaaggtcaacgacatgctggggtca
caaggcatggccaaatcaggaaagttcaggatcattccccttcactccatgatgccgact
gtcaatcaaactcaggtatttgaaaggcccccacagggagtgaggaaaattgttttagcc
acaaacattgctgaaacaagtataaccatagatgatgtagtgtatgttgtggactgtgga
caagtgaaggagaagagttttgacatcaccaacaacctggccaccttacagccagtctgg
atcagtaaggcttcagctaaacagagaaggggcagagctggcagggtgcaaccaggtgtg
tgtttccacctgttctctcagctgaaggagtctaagatgcaggagtaccagctacctgag
attctcaggactcctctggaggagctctgtctgcagattaaggtgtgtttgtttgtttgt
ttgtttgtttgtttgtttgtggagtctaagatgcaggagtaccagctacctgagatcctc
aggacacctggaggagctctgtctgcagattaa
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