Branchiostoma floridae (Florida lancelet): 118430961
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Entry
118430961 CDS
T01074
Name
(RefSeq) ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04120
Ubiquitin mediated proteolysis
bfo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118430961
04120 Ubiquitin mediated proteolysis
118430961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118430961
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118430961
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
U-box type E3
118430961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
FXMRP1_C_core
Motif
Other DBs
NCBI-GeneID:
118430961
NCBI-ProteinID:
XP_035697885
UniProt:
A0A9J7MET4
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All DBs
Position
14:complement(17289516..17315666)
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AA seq
1172 aa
AA seq
DB search
MSELSQDEMRRRRLARLAAGGLSTSPPQGSGTTPTPSPSSSTPTSPTQAASSQLTSPSQS
PSSQLTSPAQGAQSPLQSGFLTPGDRSPRTPSSPTTPVTPTGARPRQRAGASATLDYGSQ
SSQSQSMDTDSEKGTLSQIDVDSGIENMEVEEVDRKDGAVSQREPSCSSELNEEQLLAIV
CRILRVSWKKPEQDVVFLPGLAAEFKQDPKQVYNSLQDLVSQILVEVLTMPQAQSHNPFA
SLTATPSQSLSSITSKKFGTSPFHGLPSPGAEGATASASSSSSTSDRFHIPACRETEILN
YLLECFDRVGMEERTAPKRCSQPPVCSLLNDLRTQCCTHAILVLRGAFTEPRAPGKQSYL
VPYLLCRNLPRGFLHELVMMACQDPEDFQGVIGVVLQDLQQTMSEFSMENDNYKYPLMAL
TELCELRKGTSSHRPVCNLIALQTTWLPETLTQAGGREIQKLSFLGQFLSLSAFAEDDPK
IAERFFAGPMLTQDSTRLINSSLQQALDFARGEMFKIIHSLLVNSETRDAMMSYLQAVIA
RNHKRAQMQADERMVAQDGFMLNIMTVLQQLSVKVKMDKVDALYPHHPKSRIDLSEETRL
RCSSEECKTWTEELNKEPSNWVDPKFPTECFFLTLHCHHLALLPACRNYMRRARAIRDLQ
RALEELQAQEPLWRNLPTANRHRETLKRWKAQQKKLTRSKACAEAVLHDESMLRRCLHFY
GMEVMLLFKILDPKNPRPTLPLVEDVPMAFAALPEFYVEDLADFLMFVLQHAPQVLEDPC
TQDIVLFLLLMVATPKYMRNPYLTSKLIEVMFVANPAVQPRTERIHEMIVSHPLAAPYLA
PALIRFYSDVETTGASSEFYDKFSIRYHISIILKTLWKIPAHQRTIIEESNTGKDFVRFV
NMLMNDTTFLLDESLDSLKRIHETQEAMKDVATWESQPRDMQESRRRQLNIDERQCRSYL
TLATETVDMFHYLTVQIKEPFLRPELADRLAAMLNFNLQQLCGPKCKDLKVQNPEKFGFE
PKRLLGQLIDIYLHLDCEKFADAIANDERSYRKGVFEDACGVMMRAMIKTQSEIEHFANL
AERVEKILVQKLKSEADFSDAPDEFKDPLMDTLMEDPVILPSGTVMDRAIITRHLLNSQT
DPFNRQSLREDELIPADELKQRIADWKREKMQ
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagctttctcaggacgagatgcgccggagacggctggcacgtttagctgctggg
ggtctctccacatcccctccccagggctcaggaaccacccccaccccctccccctcgagt
agcacccccacctcccccacccaagctgccagtagccaactcacttctccttcccagagt
cccagcagccagctgacatctcctgcccagggtgctcagtcacccctgcagtctgggttt
ctgaccccgggggatcgctccccacggacccccagttcccccacaactccggtcaccccg
acaggcgccaggccgagacagagggctggggctagtgccactctagactatggttctcag
tcgtctcagagtcagagtatggatacagatagtgaaaaagggactctgtcccagatagat
gtggactcaggtatagagaacatggaagtggaggaggtagatagaaaggatggtgctgtg
tcccagagggagcccagctgtagttctgagctgaatgaagagcagctgctagcaatagtg
tgtcggatcctgcgggtctcatggaagaaacctgaacaggacgttgtcttccttcctggg
ctggctgctgagttcaaacaggacccaaaacaagtatacaacagtctacaggacctggtt
agtcagatcttagtggaagtgctgaccatgccacaggcgcaatcccacaatccctttgcc
agtctgacggccacgccctcccagtccctgtctagtatcaccagtaagaagtttggtacc
agtcccttccatggtttgcccagccccggtgcagaaggtgctacagcctctgctagttcg
tcctcctccaccagtgacaggttccatatcccagcctgtagggagacagagatcctcaac
tatctactggagtgctttgacagggtgggcatggaagagaggacagctccaaagcggtgt
agccagccgcccgtgtgctctctcctgaacgacctgaggacccagtgctgtacccacgcc
atcctggtgttgcggggggccttcacggaaccgcgggctccgggcaagcagtcgtacctg
gtgccgtacctgctgtgtcgtaacctgccgcgggggtttctgcacgagctggtcatgatg
gcatgtcaggatcctgaggacttccagggggttattggtgtcgttctgcaagacttacaa
cagaccatgtctgagttttcaatggagaacgacaactacaagtaccctctcatggccctg
acagaactatgtgaactacggaaggggacttcctcccacagacctgtctgtaacctgatt
gccctgcagaccacctggctccctgagaccctgacccaggctggagggagggagatacag
aagctgtccttcctgggccagttcctcagtctttcagcttttgctgaggatgatcccaag
attgcagagaggttctttgctggcccaatgctgactcaagacagtacacgactcatcaac
agttccttacaacaagcgctggactttgccaggggcgagatgttcaagatcatccacagt
cttctggtgaacagcgagaccagggacgccatgatgtcgtacctgcaggccgtgatcgcc
cgtaaccacaagcgagcacagatgcaggctgacgaacggatggtcgcccaggacgggttc
atgctcaacatcatgactgtcctgcagcaactcagtgttaaggtcaaaatggacaaggtg
gatgccctgtacccccaccatcccaagtcccgtattgacctgtcggaagagacaaggctt
agatgttcttctgaggagtgcaagacatggacggaagaactaaataaggagccttccaac
tgggtggaccccaagttcccgacagagtgtttcttcctgacgctccactgccaccacctg
gccctgttaccggcctgcaggaactacatgcgccgggcacgtgccatcagagacctccag
cgggccctggaggaactgcaggcccaggagcccctgtggaggaacctgcccactgccaac
agacacagagagacgttaaagagatggaaagcacagcaaaagaaactgaccagaagcaag
gcatgtgcagaagcagtgttacacgatgagtccatgttgcgaaggtgcttgcacttctac
gggatggaagtcatgctgctcttcaagattcttgaccccaagaaccccagaccaacccta
cccctggtagaagatgtacccatggcgtttgctgctctgccagaattctatgtggaagac
ctggctgacttcctcatgtttgtgctacaacatgccccccaggtcctggaagacccctgt
acccaggatatagttctcttcctgctgctgatggtggccacgcccaagtacatgcggaac
ccctacctcacctccaaactcatagaggtgatgtttgtggccaatcccgccgtacagcca
cgtacggaaaggatccacgagatgatcgtgtcccaccctctggcagcgccgtacctggca
cccgcactcatcaggttctactcagatgttgagacaacgggagccagcagtgagttctat
gacaagttcagcatccgctaccacatcagtatcatcctgaagacactctggaagatccca
gctcaccagagaactatcatagaggagagcaacactgggaaggactttgtccgttttgtg
aacatgttgatgaatgacaccaccttcctgctggacgagagtttggactcgctaaagaga
atccacgagacacaagaagccatgaaggatgtggccacatgggagtcacagccgagggat
atgcaggagagccgtcgacgccagctgaatattgatgagcgccagtgccggtcgtaccta
acactagccacagagacagtggacatgttccactacctcactgtgcagatcaaagagcca
ttccttagacctgagctagcggacagattggcggccatgttgaactttaaccttcagcag
ctgtgcggacccaagtgtaaggacctgaaagtgcagaacccagagaagttcggcttcgaa
cccaagagacttctgggacagctgattgacatctacctgcacctggactgtgagaagttc
gcagatgccatagcaaatgatgagcgctcctacagaaaaggtgtgtttgaggatgcctgt
ggggtgatgatgcgggccatgattaagacacagtcggagatcgaacacttcgctaacctt
gcagagagggtggagaagattctggtccagaaactcaagagtgaagctgacttcagcgat
gctcctgatgagttcaaagatcccttgatggacaccctgatggaggaccccgtgatcctc
ccctctggaacggtaatggaccgtgccatcatcactcgccacctcctgaactcacagaca
gaccccttcaacaggcagagtctcagggaggacgaactcattcctgccgatgagctgaaa
caaaggatagcagattggaagagggagaagatgcagtga
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