Branchiostoma floridae (Florida lancelet): 118431261
Help
Entry
118431261 CDS
T01074
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118431261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfo03400
]
118431261
DNA repair and recombination proteins [BR:
bfo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
118431261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
118431261
NCBI-ProteinID:
XP_035698266
UniProt:
A0A9J7NCV4
LinkDB
All DBs
Position
15:6162222..6175718
Genome browser
AA seq
748 aa
AA seq
DB search
MRRSQAPSQLAAAKRKPGEDADEDWRPNKVAKRNKAKSDIDDSPSSQFMSPYRRPLTPIT
NQSRFPDSSSHEAFIRSILSKPFKIPIPNYKGPTLKGSLGIRRQGTRRALHDPEEEGALV
LYHPPQLSAQEALKVDLEKHPVHVVVDPVLCCVLRPHQREGVKFMWDCVTGERIPGSQGC
IMADEMGLGKTLQCITLLWTLLKQSPDAKPTIDKAIVVTPSSLVKNWYNEINKWLGTRVN
ALAIDSGSKDQIDRNLDSFMSQQGRRVSSPILIISYETFRLHAAVLHRGPIGLVICDEGH
RLKNCENLTYQALSGLKCRRRVLLSGTPIQNDLLEYFSLVHFVNTGILGTAQEFKKRFET
PILRGRDASASDKDQKRGEEKLKELLDIVDRCIIRRTASILSKYLPVKIEQVVCCRLTPL
QTALYKHMVQSKLVQAQLDKSKSGKVTGSAFTAITQLKKLCNHPSLIYEKCLEGDEGLDG
ALDLFPEKYSPKHIQPELSGKMLVLDYILAMTKSKTSDKVVLVSNYTQTLDLFEKLCRSR
GYLYVRLDGSMTIKKRAKVVERFNNPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN
PANDEQAMARVWRDGQKKQCYIYRLLATGTIEEKIFQRQAHKKALSSCVVDQEEDVDRHF
SLDELRDLFPLNEDTISDTHDKFKCRRCVNRIQVRPPPDDSDCNSDLSQWHHAADKRGLQ
DLMLKACWDAAVTFTFHHRSHEEQRGVV
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtagccaggctccaagccagctggctgcagccaaacgtaagcctggggaggat
gctgatgaagactggagaccaaacaaggttgctaagaggaacaaagccaagtctgatatc
gatgattctccatccagtcagtttatgtcgccgtaccgacgaccactgacccctatcacc
aaccagtctcgtttcccagactcttcatcgcatgaggcctttatcagatcaatcctgtcc
aaacccttcaagattcctatccctaattacaaaggtcccacattaaaaggatcactaggc
atccgcagacagggaactcggcgggcgcttcatgaccctgaagaggagggagctcttgtt
ctgtaccaccctccacagctgtcagctcaggaggctctgaaagtagacctagaaaagcat
cctgttcatgttgttgtagaccctgtcctgtgctgtgtgctgcggcctcaccagagggag
ggggtgaagttcatgtgggactgtgtgacgggagagaggatccccggcagccaggggtgc
atcatggctgatgaaatgggtttaggcaagactcttcaatgtatcactctcctctggaca
ttactaaaacaaagccctgatgccaagccaacaatagacaaagccatagttgtgacacca
tccagtttagtcaagaattggtacaatgagatcaacaagtggctgggcaccagggtcaat
gccctcgctattgactctggctccaaggaccagatagacaggaatcttgacagtttcatg
tcccagcagggcaggcgtgtttcctcccctatcctcatcatctcgtacgagacattccgg
ctccacgctgctgttctacacaggggcccgatcggactggttatatgtgacgagggccac
cggctaaagaactgtgagaacctgacgtaccaggcgctgagtgggctgaagtgcaggaga
cgggtgttgctatcgggcacacccatccagaacgatctcctggaatacttcagtctggtg
cactttgtcaacactggtatcctgggcacagcacaagagtttaagaagcgatttgagacg
ccaatcttacgcggtcgagatgcaagcgcctcggataaggaccagaagaggggagaagaa
aaactcaaggagctgttggacattgttgaccgctgcatcatcaggagaacggcctccatc
ctgtccaagtacctgccagttaagattgagcaggtggtttgttgtcgactgacaccccta
cagactgctctttacaagcacatggtacagtctaaactggtgcaggctcaactggacaag
tccaagtcagggaaggtgacggggtccgccttcactgccatcacccagctgaagaaactc
tgcaatcatccttcattgatttatgagaaatgtctggagggtgatgaagggttagatgga
gctctggatctgttcccagagaagtatagtcccaaacacatccagccagagctgtcaggt
aagatgctggtgttggattacatcctggccatgacgaagagtaaaacctcagacaaggtc
gtcctggtctccaactacacacagacgctggacctgtttgagaagttgtgccgatccaga
ggctacctgtatgtgcgtctggatggatctatgaccatcaagaaaagggcaaaggttgtg
gagaggtttaacaaccccagtagccctgagttcatcttcatgttgagcagtaaggcagga
ggctgtgggctgaatctgattggtgctaaccgactggtgatgttcgaccctgactggaac
ccagctaatgatgagcaggccatggcacgggtgtggcgtgacggccagaagaaacagtgt
tatatctacagattactagcaactggtacgatagaggagaagatattccagcggcaggcg
cacaagaaggcgctgagcagctgtgtggtggatcaggaggaagacgtggatcgccacttc
tcattggacgagctgcgggacctcttcccgttaaacgaggacaccatcagcgacacgcac
gacaagttcaaatgtcgtcgctgtgtgaacagaatccaggtgcggccgccgcccgacgac
tcggactgcaacagcgacctctcgcagtggcatcacgcggcagataaacgggggcttcag
gacctcatgctcaaggcatgctgggatgcagctgtgaccttcaccttccatcacaggtca
cacgaagaacagaggggtgtggtgtga
DBGET
integrated database retrieval system
