Branchiostoma floridae (Florida lancelet): 118431332
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Entry
118431332 CDS
T01074
Name
(RefSeq) very low-density lipoprotein receptor-like
KO
K20053
very low-density lipoprotein receptor
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118431332
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118431332
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
SGL
EGF_CA
Vgb_lyase
DUF4690
EGF
EGF_3
SteA-like_C
Synapsin_N
Motif
Other DBs
NCBI-GeneID:
118431332
NCBI-ProteinID:
XP_035698345
UniProt:
A0A9J7NCN6
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Position
15:6067929..6092123
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AA seq
854 aa
AA seq
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MRLGDLFAIAVCCGLLVLSRIPGSRADAHCGSSQFTCHNGRCIPSSWKCDEDDDCGDNSD
ETDCPVRTCSDSEFTCDDSKCIPSRWQCDGDNDCADGSDEKPDICNQRTCRSDHFSCEEN
GGGICIPRTWVCDRDADCENGRDEEGCDQLTCDPTEHTCDNGKCITVRWVCDQDNDCGDN
SDEKNCPTPTCSTNEFMCNNSYCIPRRWLCDGDFDCLDLSDEKDCPSVPPGTECSSREFT
CSNRDCVHISWKCDGDEDCADGSDEVDCIRQCSEDEFQCDNGLCIAGPLQCDGKRDCDDG
SDERNDCQPIISCDPTKEFECINSQTGVREQCIPFSKVCDGNDDCSDGSDEPGQHVCNVD
ECAVNNGSCMEGCVNTPHSYYCTCNDGFDLQDDGRTCKDKDECAIFGTCSQLCENTHGGY
KCECVDGYTLDPRNGYCKADGEEAKLIFANRRDLRMIDMATGEYTELVSDLRSAIATDVD
VPNKRVYWTDVAREQIYSAPIEADSNGERSKVRLVSEGIHTPDGVAIDWIHAKMYWTDTG
TDTISVATLDGNMRKTLFATDLDEPRALALDPTEGFMYWSDWGQPAKIERAGMNGFFREV
LVQSNIEWPNGLTLDLLGKRIYWVDAKLHTISSVTTTGADRRTIIQDDVLLAHPFSITVF
QDTLFYTDWESESIHSLNKFTGGDHKVVGSDLYSPMDITVYQSKRQVSGTNFCENNGYCS
DLCLPAPQINEHSAKYTCLCEDGRELMDDHRTCTGRDQIPMPTGESPAGQTGGSMQPGHV
AAIVIAVLVALVVLVALIGFFAWRFFRSTNMKSMNFDNPVYRKTTEDQFSLQKHAQPTGH
SYPPITALSTVEEP
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagactaggggacttgttcgcgatagctgtgtgctgtggactgttggtgttgtcgaga
ataccgggatcgagagcggacgctcactgcggttcatcccaattcacatgccacaacgga
cggtgtattccctcatcatggaaatgcgacgaagatgacgactgtggagacaattctgac
gagaccgactgccctgtgagaacatgctcagacagcgagtttacctgtgacgactccaag
tgcatcccatcgcggtggcagtgtgacggggacaacgactgtgccgatggctcagacgaa
aagccagacatttgcaaccagcggacctgccggtcagaccacttcagctgcgaggagaat
ggaggcggaatctgcatcccgcggacgtgggtgtgcgatcgggacgccgactgcgagaac
ggccgtgacgaggagggctgcgaccagctgacctgtgaccccaccgagcacacgtgcgac
aacgggaagtgcatcacggtgcgctgggtgtgcgaccaggacaacgactgcggcgacaac
tccgacgagaagaactgcccgaccccgacctgctcaaccaatgagttcatgtgtaacaac
tcctactgcatccccagacgctggctgtgcgatggcgacttcgactgtttggatctctcc
gacgagaaggactgtccctctgttccccctggtacggagtgttcttcccgcgagttcacc
tgcagtaaccgcgactgtgtccacatctcctggaagtgtgacggtgatgaagactgcgct
gatggttctgatgaagttgactgcattcgccagtgttcggaagacgaattccagtgtgac
aacggcctctgtatcgccggcccgcttcagtgcgacggaaagagagattgtgatgacggc
agcgacgagcgaaacgactgccagccaatcatcagctgcgatccaacaaaagagttcgag
tgcatcaactcgcagactggcgtgcgggaacagtgcatcccgttcagcaaggtctgcgac
ggtaacgacgactgttcggacggctcggacgagcctggccagcatgtttgcaacgtggat
gagtgtgcagtgaacaacggcagctgtatggaaggctgcgttaacacacctcactcctac
tactgcacctgtaatgatggttttgacctgcaggatgatggaaggacgtgcaaggacaaa
gacgagtgtgccatctttgggacctgcagccagctttgcgagaacacccatggcgggtac
aagtgcgagtgcgtcgatggatacacactggacccacgcaacggatactgcaaggctgac
ggagaagaggcaaaactgatctttgcaaaccgccgtgacctgcgaatgattgacatggcg
actggcgagtacacggagctggtcagcgacctacggagtgccatcgccaccgatgttgat
gttccgaacaagcgcgtttactggactgacgtcgcaagagaacagatctacagcgcccca
attgaagctgactctaacggagagcggtccaaggttcgcctggtgtccgagggaatccac
acccctgacggcgtggccattgactggatccatgccaaaatgtactggaccgacactggc
accgacaccatctctgtggccaccctggatgggaacatgcgcaagactctgttcgcaaca
gacctggatgaaccaagagcactggccctggatccaactgaagggtttatgtactggtca
gactggggccagccagccaagatcgagcgtgcggggatgaacggcttcttccgtgaagtc
ctggtccagtccaacatcgagtggccaaacggactgacccttgacctcctgggcaagcgt
atctactgggtggatgccaaactgcacacgatcagctctgtgacgaccaccggcgctgac
cgcaggaccatcatccaggatgacgtcctgctggcccatcccttctccatcactgtgttc
caggacaccttgttctacaccgactgggagtctgagtccatccacagtttgaacaagttc
accggaggcgaccacaaagttgtcggcagtgacctgtactcccccatggacattacagtg
taccagtccaagagacaagtatcaggaacaaacttttgcgagaacaacggatactgctcg
gacttgtgtctgcctgcccctcagatcaacgagcactcagctaaatacacctgcctgtgt
gaggatgggcgcgagttgatggatgaccaccgtacatgcacaggacgagaccagatcccc
atgcccacaggagaaagcccggcgggccagaccggcggcagcatgcagcccggccacgtg
gccgccattgttatcgccgtgctcgtcgctctcgtcgtcctggtggccctcatcggcttc
ttcgcctggcggttcttccggagtacgaacatgaagtcaatgaactttgataaccccgtg
taccgcaagacaacagaggaccagttcagtctacagaagcatgctcagccaacaggacac
tcctatccccccataaccgccctctccacagtagaagaaccataa
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