Branchiostoma floridae (Florida lancelet): 118431360
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Entry
118431360 CDS
T01074
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo02010
ABC transporters
bfo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118431360
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118431360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bfo02000
]
118431360
Transporters [BR:
bfo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118431360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
118431360
NCBI-ProteinID:
XP_035698376
UniProt:
A0A9J7NBK8
LinkDB
All DBs
Position
15:8130526..8180839
Genome browser
AA seq
2346 aa
AA seq
DB search
MGFWVQLKLLLWKNFTLRKRQKVRLLIEIIWPLILFMILVWIRTSRPPYSQHECHYPSKA
LPSAGLIPFMQTLICNFDNKCYDQPLAGEAPGRVFEFKDSPLSQLYFDIDELLSNDTELL
GLENLVEDYQALQELVEFFNNRSAVVHHGLKFADMLVDVDRMERFLRHNLSLAPDIVTDL
ITAELNPQQAVQMIFTDRVPLRRIVCNETLLGRLIIFTNPSITSNVTTAMCGLSAQNLTA
LAREFQRDVDWSKFLEEIFNFVQDNTSLDPAEAQARWNATFQQLRRLSEDIGALGSFQSI
INDIQNITSLLREENGTIPSLGLLVCGREDALNVGSFADNMRIFTQESMQSTQFRDYFDK
DDSNDAGDFAKDNRTTPFCQKLFHQLDSQRLTKFLWSYLKPLLAGKIPYSPNTPAVRKIL
QEANSTFQEIGRLEDFADTWLTVLSPEINDTLTNSDTVNFIRDYLSNPLFAEQFDAAMEE
RLGPDPWLTADWLVGFLGGNTTSGTNYTWVNAIEETNSAFQTLLNYLQCLELNKFEPMET
EEDVTIRGHELIADNTLWAGIVFSNMNDDPGSEEVIPPHVEYKIRMDIDVVTHTNRIFDR
YWRPGARDRPFNDMAYIRGGFVYLQDMIDQGIIRALTGKDEEPITGVYLQQFPYPCYTKD
SFVWALSRSIPMFMTLSWIYPVAMIIKSIVYEKEERLKEVMKMMGLTNGVHWTAWFFTSI
IVMFLTICLLTATLKYGAVMQNSNPLVLIVFLLCFAIATIMQCFLISTFFSRANLAAACG
GIIYFVLYLPYTLIIVWEDRMTNGSKGFASLLSSVAFGFGCTYIARFEEQGVGIQWDNIW
TNPSPQDSFTFGFSLLMMLFDAFLYGLMTWYIEAVFPGQYGVPRPWYFPIMKSYWCSSDS
NLSGLTHGMADMPRIEESEDFEKEPSHLPLGVGIQNMTKVYNDGNKLAVDGLSLNFYEGQ
ITSFLGHNGAGKTTTMSILTGLFPPTSGTAYVDGKDIRYEMDKIRKSLGMCPQHNVLFDN
LTVSEHLWFYGRLKGMTEAEVQDEMERMVKDVGLPNKKHEISKNLSGGMKRKLSVAIAFV
ANSHTVILDEPTAGVDPYSRRGIWDLLIKYKKGRTIILTTHHMDEADLLGDRIGIISQGK
LRCCGSSLFLKGRYGNGYYLTLVKKSTGSFASSRCGSSFSSVASIAKNGHNGQSVGDEGL
GSEVSSDTSDDGASAMSSVLDMPPGEMTGIFNENVVNSLVLSHIADAKLLENIGKEVIFL
LPNGRSNGAALEKLFSDLDANLDRLHISSYGISDTTLEEIFLKVAEETGVDMDVEQAIEE
ITEGGQLPKPILPGLRRTMSKEGRTSKKKMNAISIDVPDNLVLVDEETVPNMDDDPIEDK
KGGQGSYQIKGRDLIKQQFWALFVKRWHHTRRNRKGFVASIILPAVFVCIAMIFAMIVPP
LQDYPALKIDPSLYKGPENPLYTFFSNDAPEAPDTDALLNALLNQPGMGTSCMDSGGKGA
PVCKKTRSSCVVPKPRALSDRMKRMFAAQNANFTPTAARPSPDCSCEAGSSVCPAEAGGP
FPPCDIGETGDYLMNMTGRNITDYLVKTMDRYRRNRYGGLSLGEVNDLVGEVNYTLLARV
IDRLEKRINFTLVESHDNLVEAITDFIINLETRDNAKVWYNNKGYHAMVAYINVISNAIL
RANLPPGSDPRQHGITAFNHPMNFTKEQLSEETLLKGGADVVIAICVIFALSFVPASFVV
FLIGERVSKSKHLQFVSGVNPTVYWCANFTWDMCSYLVSAMLCVFIFVAFQKAAYVSAAN
FPCLLALLLLYGWAVTPLMYPAAYVFDVSSTAYVVLTSINLFIGINGTVATFILELFEDD
QEIITINNYLRQVFLIFPHFCLGRGLMDMARNQLYADAFSRFGENTFKNPFAWDLVGRNL
FSMVMQGIIFFAFTLLVEYRFFIKPRKVDSDAPALEDEDEDVAEERERVIRGDTQGDLLV
LEELTKVYQSRGRKNRAVDRISVAVPAGECFGLLGVNGAGKTTTFKMLTGDSSVTSGQAW
LNSYSILSEMRDVHQSMGYCPQFDALDPLMTAREHLQFYAKLRGVPKSEIDRVARWGVRT
LGLSQYSDKCAGTFSGGNKRKLSTAISLIGNPPVVFLDEPTTGMDPGARRFLWQCITRLV
KEGRSVVLTSHSMEECEALCNRMAIMVNGRFKCLGSVQHLKSRFGDGYTVMIKVGGDLPS
VQPACDFMAATFSGAVLKEKHHNMLQYQLPSQWTSLAQLFGELDRKRQELNIEDYSVSQT
TLDQVFINFAKLQTDGIDDIVIPEMADLIKEPQNGSAPYGMYFSDIRSSSEMALFTDTAS
VSSVEA
NT seq
7041 nt
NT seq
+upstream
nt +downstream
nt
atgggattctgggtacagttgaaactgctgctatggaaaaacttcacactcaggaagaga
cagaaggtgcggctgctgatcgagataatctggccgctgatcctgttcatgatcctggtg
tggatcaggaccagccgccccccctacagtcaacatgaatgccattaccccagcaaggca
ctcccctcagccggcctgatacccttcatgcagaccctgatctgtaactttgacaacaag
tgttacgaccagcctctggcaggggaggcacctgggagggtgtttgagttcaaggactca
ccgttatcgcagctgtattttgacattgatgagctgctctccaatgacacggagctgttg
ggactggagaatcttgtggaagactatcaggcactgcaggaattagtggagttcttcaac
aacaggagtgcagtggtgcaccatggtctgaagtttgccgacatgttggtggatgtagac
aggatggagcgtttcctgagacacaacctgtccctggcacctgacatcgttaccgacctc
atcacggcagagttaaacccacaacaggctgtccagatgatcttcactgatcgcgtcccc
ctccgccggattgtgtgcaatgagactcttctcggccggctcatcatattcaccaacccc
tccatcacttctaacgtaaccacggcgatgtgcgggctgtctgcgcagaacctgacagct
ctggccagggagttccaacgagacgtggactggtccaagttcttggaggagatctttaac
tttgtgcaagacaacacctccttggaccccgcagaagcccaggccaggtggaatgctacg
ttccagcaacttcgccgtctgtcagaagatatcggtgctctgggtagcttccagtcaatc
atcaacgacatccaaaacatcacgtctcttcttcgcgaggaaaacgggaccatcccatcc
ctgggactcctggtctgcgggagagaggacgccctgaatgtcggctccttcgcagacaat
atgcgcatctttacccaggagtccatgcagtccacacagttccgtgattacttcgataag
gatgactcgaatgatgctggagactttgccaaagacaacaggacaactccgttttgtcag
aagctgttccatcagctggacagccagaggctgaccaagttcctgtggagttacctgaaa
cctttgctggcaggcaagatcccgtacagcccaaacacacccgctgtcaggaaaatacta
caagaggctaactccacattccaagagattggtcgtctggaggacttcgctgacacctgg
ctgactgttctgtctcctgagatcaatgataccttaactaacagtgacactgtcaacttc
atcagggattatctgtcaaacccactgtttgctgaacagtttgacgcagccatggaggag
aggctgggaccggacccatggctgaccgctgactggctggtcggcttcctgggtggcaat
accaccagcggcaccaactacacctgggtgaacgcaattgaggagacaaactcagcattt
caaacactgctcaactatttacagtgcttggagctgaacaagtttgagccgatggaaacc
gaggaagatgttacaatccgaggacacgaacttatcgctgacaacaccttgtgggcaggt
attgtattctccaacatgaatgatgaccctgggtctgaggaagtgatccccccacatgtg
gagtacaagatcaggatggacatcgatgtggtcacccacaccaacagaatatttgacagg
tactggaggcctggagcccgtgatcgaccctttaacgacatggcgtacatccggggaggg
ttcgtgtacctgcaggatatgatcgaccagggcatcattcgtgctctgacgggaaaggac
gaggaaccaatcaccggagtttatcttcagcagttcccatacccgtgttacactaaagac
tcgtttgtgtgggcgctatcccgctccatccccatgttcatgaccctgagttggatctac
ccggtggccatgatcatcaagagcatcgtctacgagaaggaggagcgtctcaaggaagtg
atgaagatgatgggcctgactaacggggtccactggaccgcctggtttttcaccagtatc
atcgtcatgtttctcaccatctgtctgctgactgcaacgctgaagtatggagcagtgatg
cagaacagcaatcctctggtcctcatcgtgttcctgctctgtttcgccatcgcgaccatc
atgcaatgcttcctgatctccacgttcttctcgcgagcgaacctggcggcggcgtgcggc
gggatcatctacttcgttctgtacctgccgtatacgctcattatcgtgtgggaggacagg
atgaccaacggatccaagggctttgctagcctgctgtcgtcggtggcgttcggtttcggc
tgtacgtacatcgcgcggtttgaggagcagggggtggggatccagtgggacaacatctgg
accaacccctccccccaggactccttcaccttcggcttctccctcctcatgatgctgttc
gatgccttcctgtacggcctcatgacctggtacatcgaggctgtcttcccaggacagtac
ggagtgccccgtccctggtacttccccatcatgaagtcttactggtgcagctctgactcc
aaccttagtggactcactcatggcatggctgacatgccacggatagaagagtcagaagac
tttgagaaggagccctcccaccttcccctgggggtggggatacagaacatgacaaaggtg
tacaacgatgggaacaagctggctgtggacggacttagcctcaacttctacgaaggacaa
atcacgtccttcctggggcataacggtgccggcaaaaccaccaccatgtcaatcctgact
ggtctgttcccgcccacctcgggcacggcgtacgttgatgggaaggacatccggtatgag
atggacaagatcaggaagagcctggggatgtgtccacagcacaacgtgctcttcgacaat
ttgacagtgtcagaacacttgtggttctatggccgactgaagggtatgacagaggcagag
gtacaggatgagatggagaggatggtgaaggatgtcgggctgcccaacaagaagcatgag
atatccaagaacctctcaggaggcatgaagagaaagttgtccgttgccatagcgtttgtg
gccaactcccacacggttatcctggatgagccaacagcaggagtggacccgtactcacgt
aggggcatctgggacctgctgattaagtacaagaaaggccgcaccatcatcctgaccacc
catcacatggacgaggcagacctgctgggtgatcgtatcggcatcatctctcagggcaaa
ctgcgctgctgcgggtcctccctcttcctaaagggtcgctatggcaacggctactacctg
acgctcgtcaagaagtcgacaggaagctttgcctcctcccgctgtgggagctcgttcagt
agtgtggcctccatcgcgaagaatggacacaatggacagtccgttggtgatgaaggcctt
ggttctgaagtgtcctcagacaccagcgatgacggagcctcagccatgtcaagtgtactg
gacatgcctcctggggagatgacaggcatcttcaatgaaaatgtggtgaactccctggtc
ctgtcccacattgctgatgccaagttgctggagaacatcgggaaggaggtgatcttcctg
ctgcccaacggtcgcagtaacggagccgcgctggagaaactgttctctgatctggacgca
aacctggacaggctgcacatctccagctacggcatctctgacaccaccctggaagagatc
ttcctgaaagtcgcagaggagactggagtggacatggatgtggagcaggcgatagaagag
atcacagaaggtggccagctgcccaaacccatcctgccaggcctgcgcaggactatgtct
aaggaaggcagaaccagcaagaagaagatgaacgctatctctattgatgtgccagacaac
ctggtactggtggatgaagaaacagttcccaatatggatgatgacccaatagaggacaag
aaaggaggtcaggggtcgtaccagatcaaaggtcgtgacctgatcaagcagcagttctgg
gctctgtttgtgaagaggtggcaccacacccgcaggaacaggaagggctttgtcgcttcg
atcatcctgccagcagtgtttgtgtgcatcgccatgatcttcgccatgatcgtccctccc
ctccaagactaccccgccctgaagatagacccgtctctctacaagggacctgagaaccca
ctctacaccttcttcagtaacgatgccccagaggcaccggacaccgacgccttgctgaac
gctctgctcaaccaaccaggaatgggcaccagctgtatggattctggtgggaagggtgct
ccagtgtgtaagaagaccagatcctcctgtgtggtacccaaacccagggccctgtcagac
agaatgaagaggatgtttgctgctcagaatgccaacttcacacccactgctgctcgtccc
tcccctgactgttcgtgtgaggcgggtagctccgtgtgtcccgctgaagcgggtggaccg
ttcccgccgtgtgacatcggagagacaggagactacctcatgaacatgacgggccgcaac
atcaccgactacctggtcaaaaccatggacaggtacaggagaaacagatatggtggcttg
tcccttggtgaggtcaacgaccttgtgggagaggtgaactacactctgttggccagggtg
attgacaggctggagaagaggatcaacttcaccttggtggagagtcatgacaaccttgtg
gaagctatcactgacttcatcatcaatctggaaaccagggataatgctaaggtgtggtac
aacaacaaaggttaccatgcaatggttgcttacatcaacgtcatcagtaacgccatcctg
cgcgccaacctgccgcccggtagcgatccccgacaacacggtatcactgccttcaaccat
ccaatgaacttcaccaaagaacagctgtccgaggaaacattgctgaagggtggggctgat
gttgtcatcgccatctgtgtcatctttgcgctgtccttcgtgccggcgagtttcgtggtg
ttcctgatcggggagcgagtcagcaagtccaaacatctgcagtttgtgagcggggtcaac
cctaccgtctactggtgtgccaacttcacctgggatatgtgttcgtacctggtgtctgcc
atgctgtgtgtgttcatcttcgtggccttccagaaggctgcctacgtgtcagctgctaac
ttcccctgtctgctggcactactgctactctatggctgggcggtgacccctctgatgtac
ccagctgcatatgtgtttgatgtctccagtactgcctacgtggtgctgaccagtatcaac
ctcttcatcggcatcaacggcactgttgccaccttcatcctggagctgtttgaggatgac
caggagatcatcaccatcaataactacctgcggcaggtgttcctcatcttcccgcacttc
tgtctggggcggggtctcatggacatggccaggaaccagctgtatgctgatgccttctca
cgattcggtgagaacacgtttaagaacccgtttgcctgggacctggtgggcaggaacctg
ttctcgatggtgatgcaggggatcatcttctttgcctttactctactggtggagtacagg
ttcttcatcaagccaaggaaagtggacagtgatgcccctgccctggaggatgaggatgag
gatgtggctgaggaaagggagagagtgatcaggggagatactcagggggacctgctggtg
ctggaggagctcaccaaagtgtaccagtcccgtggcaggaagaaccgtgcagtggacagg
atctctgtggcagtgccggcaggagagtgttttggtctgttgggagtgaacggtgcaggg
aagaccacgaccttcaagatgctgacaggagactcctctgtgacgagtgggcaagcctgg
ctcaactcctacagtatcctgtccgagatgcgtgacgtgcaccagtccatggggtactgc
ccacagttcgatgccctggaccccctgatgacagccagggaacacctgcagttctacgcc
aaactgagaggggtccccaaatctgagattgacagggttgctcgctggggagtgcggacc
ctgggtctgtcccagtactctgacaagtgtgctggaactttcagtggaggcaacaagagg
aagctatccacagccatctctctcatcgggaaccctcctgtagttttcctggatgagccg
accaccggtatggacccgggagctcggcggttcctgtggcagtgcatcacccggctggtg
aaggaggggcgctcggtggtgctcacctcccacagcatggaggagtgtgaggcgctgtgc
aacaggatggccatcatggtcaacggcaggttcaagtgtctgggcagcgtccagcacctc
aagagcaggtttggtgatggctacactgtcatgatcaaggtaggaggagacctgcccagc
gttcagcctgcctgtgacttcatggcagcgaccttcagtggggcagtcctgaaggagaag
caccacaacatgctgcagtaccaactgccctcccagtggacctcgctggcacagctgttt
ggggagctggacaggaagcgacaggagctgaacattgaagactattcagtcagccagact
acactggatcaggtcttcatcaactttgccaagctgcagacagacggaatcgatgacatc
gtcattcctgaaatggcggatctgatcaaggaacctcagaatgggagcgccccttatggc
atgtacttctcagacatccgctccagtagtgagatggcattgtttacagacacggcttct
gtcagttccgttgaggcatag
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integrated database retrieval system
