Branchiostoma floridae (Florida lancelet): 118431377
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Entry
118431377 CDS
T01074
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118431377
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bfo04515
]
118431377
Cell adhesion molecules [BR:
bfo04515
]
Immunoglobulin superfamily
NGL family
118431377
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
Ig_2
V-set
VEGFR1-3_N_Ig-like
LRR_LRWD1
LRRNT
LRR_EndoS
LRR_NXF1-5
LRR_NXF2
DHU1_N
Izumo-Ig
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
118431377
NCBI-ProteinID:
XP_035698419
UniProt:
A0A9J7NC79
LinkDB
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Position
2:complement(11850105..11863003)
Genome browser
AA seq
608 aa
AA seq
DB search
MVSTLSLQSYSTVRVVLLAVLWRSVDLLPCPKSCSCGGTYNNPDHTVSCNNNGLASIPDG
VPVGANTLNLRGNLLGRLHPGPFRRLHDLKTLDLSANKIRNIADDTFVGLLRLETLNLSA
NMLTSVSSSLFTGLRNLRTLLLSKNPIVCIGKEAFSPIPFLRSLDLERLTHLRALSRKTF
AGLHRLINLNMVGSNLMAVPYMQYLYGLEKLNLSQNNLTFITASDFRGLTHLRILVLSSN
RLTQIEQNSFDDLTALSELNLSNNSLKILPFGLFSVMTSLTKVNLRDNQWHCTCEITWLA
RWARENVREKERDLCGMCTYPVSMQYTSLCEAPLDKLKCLPPKIIDQRVSVNVTTGQTAT
LRCRASREANVGWITPNGTKVKRGSFRVRIKLTHDNTLNITNTSSADAGRYRCVAKNQAG
VTTLDTILNVTGSILPIASATEMPVEEDSLDDRLDPRICTVDSKFFSTLDDIDLQSDQKS
IPLPSPTRDSSDNRRTEPTAINVKNASVSGSRGSIINYYRKYIIASVASVLSLGVIVFIT
FCLTKKCSKWRRKRKIVRERWDRARKTCARGPTCLKGTEKDEPNELPDVYSACNGGGVLA
FPIEETIV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccacgctatccttacagtcgtatagcacggtacgtgtggtgttgttagccgtc
ttgtggcgatctgttgaccttctgccgtgtccaaagtcgtgctcttgtggcgggacctat
aacaacccggaccacaccgtctcctgtaacaacaacggcctcgcctccattcctgacggg
gttcctgtgggtgcaaacaccctcaacttacgtggaaatctgttaggaaggctccacccg
ggccccttccggcggctacatgatttaaagaccttggatctgagcgcgaacaagataagg
aatatcgcagatgatacatttgtaggactcctgaggcttgagacgctaaatctatctgcg
aatatgttgacttctgtgtcctcatcgctattcacgggcttgaggaatctgagaactctt
ctgctgagtaaaaacccaattgtctgcatcggaaaggaagcattctctccgattccattt
ctgagatctcttgacttggagaggcttacgcatctcagagcgctctcaaggaaaacgttt
gcgggattacacagactgatcaatctgaacatggtcggctccaacctcatggctgtgcct
tacatgcaatatctgtacggactagaaaagctgaatctttctcaaaacaacttaaccttc
attactgcaagcgacttccggggacttacgcatcttaggatactggttttgtcttcaaac
agattaacccagattgaacagaattctttcgacgatttaacagctttatcggaactgaat
ctttccaataattcgctgaaaatcctaccgtttggtttattttctgtaatgacatccctc
accaaggtcaacttgagagacaaccaatggcattgtacgtgcgagatcacgtggctagct
cgctgggcacgcgagaacgtccgagagaaggaacgagatttgtgcgggatgtgtacatat
cccgtgtccatgcaatacacttcgctgtgtgaagcccccctcgacaaactgaagtgtctt
ccgccgaaaataatcgaccagagagtcagtgtaaatgtgaccactggtcagactgccacg
ttacggtgtagggccagtcgcgaggcgaatgtcggttggatcactcccaatggcaccaaa
gtcaaacgtggctccttcagggtcagaatcaagttgacacacgacaacacgctgaatatc
accaacacatcctcggccgatgccggaaggtaccgctgtgtggccaaaaatcaggccggg
gttaccacactggacaccatactgaacgtcacagggagtattctcccaatcgcttctgct
acggaaatgccagtcgaagaggactcgctagatgatcgccttgacccgaggatatgtacc
gtcgattctaagttcttctccacactggacgacatcgatcttcagagtgaccaaaaatcg
atcccgcttccgtctcccacacgagacagttcagacaacaggaggaccgagccaacagcg
ataaacgtcaaaaacgcttcagtgtcaggaagcagaggtagcatcatcaactattacaga
aaatacatcatagcgtcagtcgcctcagtcttgtcgctcggagtaatagtttttataacg
ttctgtttgacaaaaaagtgctctaagtggcgaaggaaaagaaagatagttagagagaga
tgggaccgggccagaaagacatgcgcacgaggtcccacgtgcttgaaaggaaccgaaaaa
gacgaaccaaatgaactcccagatgtgtactcagcttgtaacggtggtggcgtcttggcg
ttccctatagaagaaactattgtctga
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