Branchiostoma floridae (Florida lancelet): 118431463
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Entry
118431463 CDS
T01074
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118431463
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
bfo04091
]
118431463
Lectins [BR:
bfo04091
]
C-Type lectins
Lecticans
118431463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Calx-beta
Lectin_C
Motif
Other DBs
NCBI-GeneID:
118431463
NCBI-ProteinID:
XP_035698593
UniProt:
A0A9J7MCA5
LinkDB
All DBs
Position
15:212975..251219
Genome browser
AA seq
2104 aa
AA seq
DB search
MFDSCAWQAADITRWWEPGGHCFRVCRGQEAGRMGLFVLWIFLLVQTCASGNLIQSLKPM
NVAIGKTASLSDEHVVFNLPSDTDNSTCKVEVVHNEPMFQRVGVLRPQVFDCQYPPGTVH
YIHHGSSLLHQDQVKLRVHLFTQTKTVSEVFILTIRTRDQQYRAVQVKRNLTVSEFFGLS
DPLDANILEFVYTRSNNAKCEAHISVPVTALPEFGQLVIGENRRQVQNLREQCDKLLTLG
LRYEHLLPPSPDVDFIAITIDVYDPKGDEERYTERLHLPIIIIPGMPNTPPKGSFGAMYI
LDVDQFILSTITPSTLSAEDMESQSSKLVFNISKPLTEEQGYIVHLDDHTKPIMSFSQAD
INSLMIGYKPPNTSYQERKVFEVEFTIYDSHFTWSDPVMVFLAVRTSDTNAPRVSINTGL
TLLEGQSRPVESHNFQVVDNDNLETVQIIVVGGLRQGRLLVNGLPAIMFTPYHVADGTVV
YQHDDSDSDKDNIQLRITDGAHSVRASFPISILPKDDSPPFLINNVIFHLKEGETIPIDG
DMLTASDMDSSDDYILFSIIHPPVSGHILKKYSWQTLGHPIKSFLQRDLFEGCIYYQHTG
DEMFADSFEFVLRDSNEPPNESEPQSVVIQVIPIDDLPPAPLPEMTNSLVVKETEVGIFT
KAHLSYHDEESEDDDLMFTITTMCLFVDSLSLDDAGTVVSTENMPVMIKTDAVRPVRMFH
QSEIDHMKIAYVPPMHDIGPKSRTVQFIYSVSDPSGNTVTGQRFDITILPVDNVSPEVQV
SVLTVKEGQSVIITVENMMVTDIDTPVNEVVFIVSRQPNHGSLQVKGVELALNGMFTFED
LLHYKISYSHDGSEIPRDKFSLKVSDGVNSVTMEVPVEVHAVNDESPVMLDGLHQHLTVP
EGETVLLTPEVLAATDTDTDDFQLTFIVVQPPHRGMLYRDGVMVTQFRQQDVHAGAVSYS
HTGGEVGMTALQDSFTLVVSDDPFPRNALPVHDVNITITPVDNQPPDVILGSPFIVDEGL
STSIQDRMLNAYDVDTDEDNIGFIVTLQPAWGYVENIAPMPGHEKGNVGIPVSSFQLRNI
KDGHIRYVQSVHIGTEPTQDQLVVCATDGRHQSNNVTIPIAIRPRNDEVPNLTARDIDIV
EGAAMELNLSMLDVTDLDLPPDDIIFSVTKLPKHGQLFDSSHRASGSSQHSNVPQHFTLE
ELKTRMRLVYRHDGSESKEDVFSIAVTDGKHIVKKTVKVSIKAVNDEKPEVIRNTGLIVG
RLESKILSSVVLQSQDKDDNAKDLVYVPLTVPKRGVLQLRQKPSESWKDIKKDRNFTQWQ
VDMNMVRYLHTGLMGSKGMDVFNFYVTDGVNVSPMQDFIITIKKMKKTGIQVLSRDVHIN
EGSRVVLSSDVLSATDGTNEVEKLIFTVQNPPSQGNIEDINEPGVPLYTFSQLELLGRRV
VYVHTSKADVSSDLITFTVTNGVKEQNVSLTVSIMAVDDTPPTLSKNLGIKPHVGEVVTI
TSQDLLLTDPDSSMDNLVVNIIQGPRYGQILIGGVPVADRFTQADIDAKRISYRHSGGKA
SIDRFSFTATDGRNKGFFLMGKLLDEPVFFEIEVDLTKRQPLQVRKAVPSPLLKMSGGRV
GFQLTDEVLKVGDSVMKSVQFVFTVTRLPLHGYLERRRSGSIITTSFTQEDISDGDIVYI
LNKDVYVTSDSFLFDVSDSDGNILKNQRFHLKWSTVEMVHPQYSVCEDVGSVSILLRRRG
NLDQSVFVGVHVKGLTGEEGQDFTTGRAQQIQFDPGVSERQWTIGITKDNLQENKEKFRV
QLRNPDNTLLGQQNKSLVIIHDFQNGKCSISAQETVNMEQARQRPRSSGSVIMPSSFFSN
GTLRQWMYHGLLPVKTRTGLITSAQVSLQKMSPAQDERSNPRRPSTAIVKGNKKRSGVNQ
RPCDSSTKGLLQYESKQLYQCNGRRWQLWKPQEQPLTGGCQTGWTKYGSLCYRKGDSQET
WNDAQLICRERHSAELPTILSSETSDWISTFVNREPVWIDNYQVLQCMGKHLKYRTGLND
KGQQRRWKWPAGQSLSYTNWKPGQPDSDSDIQRNCVVMNQLQKWNVRKCHRGRNVYICAK
EVGS
NT seq
6315 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagctgcgcctggcaggcagcagacatcacacggtggtgggagccgggcggc
cattgttttcgggtttgccggggccaagaagcaggaaggatggggctctttgtcctgtgg
atatttctgctggtgcagacttgtgcttctggtaacctcatccagtcactcaaacctatg
aatgtagccattgggaaaacagcatcattatcagacgaacatgtggtcttcaaccttcca
tctgacacagataacagcacctgcaaagttgaggtggtccacaatgagccgatgtttcag
cgggttggggtgttgcggcctcaggtatttgactgccagtacccaccagggaccgtgcac
tatatccatcatggatcatcactactgcaccaagatcaggtcaagctacgtgtgcatctc
ttcacccaaacaaaaactgtctctgaggtttttattcttaccatacgtacacgtgaccag
cagtatagagctgtacaggtaaaacggaatttgacagtatctgaattttttggcctctct
gatcctttagatgccaatattttggaatttgtgtacacgagatcaaataatgccaaatgt
gaagcacacatctccgtgcctgtgactgccctgcctgaattcggtcagcttgtcattggg
gaaaacaggaggcaagtgcagaacctgagagagcaatgtgacaagttgctgacattaggt
ctacgttatgaacacttgttgcccccttccccagatgtggattttattgctattactatt
gacgtatatgatcctaaaggtgatgaagaaaggtacactgagagattgcatttacctata
attatcatcccaggcatgcccaatactccaccaaaaggctcttttggtgcgatgtacatc
ttggatgttgaccaattcattctaagtacaataacaccctcaacattgtcagcagaagac
atggagagtcagtccagcaaacttgttttcaacataagcaagccccttactgaggaacaa
ggctacattgtccacctggatgaccacactaagccaatcatgtctttctcacaggcagat
atcaacagcctgatgattggctacaaaccaccaaacacaagctatcaagaaagaaaggtg
tttgaagtagaatttaccatctatgacagtcacttcacttggagtgacccagtcatggtt
ttcctggctgtgcgtacatcagacactaatgcaccacgtgtctccatcaacactgggctg
accctcctagaggggcagtctagaccagtagagagtcacaattttcaggtagttgataat
gacaacttggagacggtacagatcattgttgtaggtggtttgagacagggaaggctgttg
gttaatggcctccctgccattatgttcaccccataccatgtagcggatggtactgttgtt
taccagcatgatgacagtgattctgacaaggataacatacaactgagaatcactgacgga
gcccacagtgtgagagccagcttcccaatcagcatccttcccaaagatgacagtcctcct
ttcttaatcaataatgtcatcttccatctcaaggaaggagagacaattccaattgatggt
gacatgctgacagcatctgacatggactccagtgatgactacattttgttcagcattatc
catccaccagtgtcagggcacatcctgaaaaaatattcatggcaaacacttggtcatcct
atcaagtctttcttacaaagggatctgtttgaaggttgtatatactaccagcacacaggt
gatgaaatgtttgctgactctttcgagtttgttcttcgtgacagtaacgaaccacccaat
gagtcggaaccacagtcagttgtgattcaagtcatcccaattgatgacctgcctcctgct
ccattgccagaaatgactaattcactggttgtcaaggaaacagaagttgggatttttact
aaagcacatctatcttaccatgatgaggagtcagaggatgacgaccttatgttcaccatc
actaccatgtgtctgttcgtggactccctaagcttggatgatgcaggtactgttgtgtcc
acagaaaatatgcctgtgatgataaagaccgatgcagtccgcccagtccgaatgttccat
cagagtgagattgatcacatgaaaattgcttatgtaccaccgatgcatgacattggacca
aaatctcgaacggtgcagtttatctattcagtaagtgatccttctggaaacacagtgaca
ggccagaggtttgacatcaccatcttgcctgtggataatgtctccccagaagtgcaggtc
agtgtgctgactgtgaaggaagggcagtctgttatcatcactgtggaaaacatgatggtc
acagacatcgacactccagtaaatgaagttgtttttattgtgagtcgccaaccaaatcat
ggaagtctgcaagtgaaaggtgttgagctggcactgaatggcatgtttacatttgaagac
ctcctccattacaaaatcagttattctcacgatggctctgagataccaagggacaagttt
tctcttaaggtcagtgatggagtgaactctgtcaccatggaagtaccagtagaggttcat
gctgtaaatgatgaatcccctgtgatgttggatggtctccatcaacatttaactgttcct
gaaggggaaacagtacttctcacacctgaagtgctggcagcaactgacacagatacagat
gacttccagttgacattcattgtggtgcagccaccacacagaggtatgctgtacagggat
ggtgtcatggtcacacagttcagacaacaggacgtacatgctggtgctgttagctactcc
cacacgggaggagaggttgggatgacagctctgcaggattctttcacacttgttgtctcg
gatgaccctttcccccgcaatgcgctaccagtgcatgatgtaaatattacgatcactcca
gtggataatcagccaccagatgttatcttgggcagcccttttattgttgatgaaggcctg
tcaacctctatccaggacagaatgctgaatgcctatgatgttgataccgatgaagacaat
attgggttcattgtcacactgcagccagcatggggatatgtggagaacattgcacccatg
cctggtcatgaaaaaggcaacgttggaattccagtttcatcctttcagttgaggaatatc
aaagatggacatatcagatatgttcagtctgtccatatcggaacagaaccaacccaggac
cagctggttgtgtgtgctacagatggaagacatcagtccaacaatgtcaccattcccata
gccatacgaccacggaatgatgaggttccaaacttgactgctcgtgatattgacattgta
gagggagctgctatggaactgaatttgtctatgctagatgttactgacttagatctacca
cctgacgatattatattttctgtgacaaagcttcccaagcatggacaactgtttgacagc
agtcacagggccagtggtagcagtcagcacagtaatgtcccacagcattttactttggag
gagctgaagactaggatgagactggtctatcgccatgatggatctgaaagtaaagaagat
gtattctctattgctgttactgatggaaaacatattgtgaaaaagactgtcaaagttagc
atcaaggcagtcaatgatgaaaaaccagaagtgatcagaaatactggcctcattgttggt
cggttagaaagcaaaattttgtctagtgttgttttacagtcccaagataaagatgacaat
gccaaggatcttgtgtatgttccacttaccgtccctaaaaggggtgtgctgcagctgaga
caaaagccttctgaaagttggaaggacataaaaaaagacagaaactttacacagtggcaa
gtggacatgaacatggtgaggtatctacacaccggactcatgggatctaagggaatggat
gtgtttaacttctatgtgactgatggagtgaatgtgtctcctatgcaggactttattata
accatcaagaaaatgaagaagacgggaatacaggtactcagtagggatgttcacatcaat
gagggaagtagggttgtcttgagttcagatgtcttgtctgccacagatggaactaatgag
gtagaaaaattgatcttcaccgttcaaaacccacccagccaagggaacatagaagatatc
aatgaaccaggagtgcccctgtacacattctctcagttggagttgcttggtcgcagggtt
gtttatgtccacacaagtaaggctgatgtttcttcagacttaattacgtttacagttact
aatggagtgaaggagcagaatgtttctctcactgtcagcatcatggcagtggatgacaca
ccacctacattgtctaagaatttgggaatcaagccccatgttggagaagtcgtaaccata
acttcacaggatctgctgctgacagacccagattcatcaatggataatctagtggtcaac
atcatccagggtcccagatacgggcagatcctgatcggtggagttcctgtagctgataga
tttactcaagctgacatagatgccaaacggatatcttacagacatagtgggggaaaggca
agcattgacagattttctttcactgcaactgatgggagaaataagggcttctttttgatg
ggaaagctgttggatgagccagtattttttgaaattgaagtggatttgacaaagaggcaa
ccactgcaagtaagaaaggctgttccctctccattgctgaaaatgagtggtgggcgtgtg
ggatttcagctgacagacgaagtgcttaaagttggagactcagtaatgaagtcagtgcag
tttgtttttacagtcacacgtcttccccttcatggctaccttgagaggagaagaagtggt
tcgatcatcacaacatcatttacacaagaggatatcagtgatggagacattgtgtacatt
ctcaataaggatgtgtatgtgaccagtgacagctttttatttgatgtgtcagactcagat
ggaaatatactgaagaatcaaaggttccatctgaaatggtctacagttgaaatggtccat
cctcagtattcagtgtgtgaagatgtggggtcagtttccattcttctgagaagacgaggc
aacttggaccagtccgtgtttgtaggtgtccatgtgaaaggtttgacaggagaggagggg
caggacttcaccacaggtcgagcccagcagattcaatttgaccctggtgtcagtgaaaga
caatggaccatagggattacaaaagacaatctgcaagagaataaggaaaagtttcgagta
cagctacgaaacccagacaacactttacttggacagcagaacaagtctcttgttatcata
cacgacttccagaatggtaagtgcagcattagtgcacaagagacagtcaacatggaacag
gctaggcaacgtcctaggtcttctggcagcgtgatcatgccatcgtcattcttctcaaat
gggacccttcgtcagtggatgtaccatggacttcttccagtgaagacaaggactggtctg
atcacttcagcgcaggtcagtctacagaaaatgtctcctgcacaagatgaaaggagcaat
ccaagaagacccagcactgctatagtgaagggcaacaagaagaggtcaggagttaaccag
agaccatgtgacagctccactaaaggccttttgcagtacgaatccaagcaactttatcag
tgtaatggcaggagatggcagttgtggaaaccacaggagcagcccttgactggtggttgc
caaacaggatggacaaagtatggaagtttatgctaccgcaaaggagacagtcaagaaaca
tggaatgatgctcagctgatctgcagagaaaggcatagtgcagaattgcccaccatttta
tcatcagaaacatcagattggatctctacatttgtgaacagggagccagtttggattgat
aactaccaagtactgcaatgcatgggaaaacatctcaagtataggactggactgaatgat
aagggccagcaaagacgatggaagtggccagcagggcagtctctttcgtataccaactgg
aagccaggtcagcctgattctgactcggacatacagcgcaactgtgtggtcatgaaccag
ctacagaaatggaatgtcaggaagtgccaccgtgggaggaatgtctatatatgtgcaaaa
gaagttgggagttga
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integrated database retrieval system
