Branchiostoma floridae (Florida lancelet): 118431481
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Entry
118431481 CDS
T01074
Name
(RefSeq) very low-density lipoprotein receptor-like
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfo04131
]
118431481
Membrane trafficking [BR:
bfo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118431481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_LRP2
EGF_CA
Motif
Other DBs
NCBI-GeneID:
118431481
NCBI-ProteinID:
XP_035698615
UniProt:
A0A9J7NCW3
LinkDB
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Position
15:complement(11991141..12010615)
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AA seq
1333 aa
AA seq
DB search
MNCLQLFFLLGTALAKADFISSVLQGFLFLPEDSLDDTCPEGDFKCHSHAVCIREGWRCD
GENDCYDGSDELDCPETFCAKSEFQCRDPPSCIPARWACDGERDCADSSDEADTACVWFR
RRSKPCEGGSFRCSNSRCIPLKFMCDGEDDCKDNSDESSCPVCRLGKFLCKSGSCIPDKY
RCDGVDDCKDNSDEEGCEPENSTTPVQHRTTTKTSTISPSTTTTSRTTSTASTTTRSETS
PKTTGTCSSDQTMCRDGSKCIPNSWLCDKAEDCADGSDEDNCAAECRKDQFRCNGSGICL
PAAWRCDSQPDCTDGSDEAGCGQECLPEEWRCDIGRCIKEKWRCDGDKDCPDGSDEKDCE
TPTCSETQFRCPDGRCLPSKWRCDGQDDCKDGPPGSDEAGCDASSAPQPCATFEFHCGDG
ECIHETWVCDGDGDCSNIADEMDCAAEPPTQKEKDCSAGYFRCEPNGCISEERICDGQVD
CEDASDEQDCAAGVNECLDNNGGCDQLCQNLRVGHTCRCKDGFRLQDNTTCADLDECGVP
GYCSQLCENGFGVYSCSCLGGYELQTGGKCVASGQEPYLIVSNRREIVRLNVRTMSKTVI
LTKDLRSVIAVDVDVARGRLFWTDVGTQKINSAALPPVDAKEAAADDVQTIFSSDVSIPD
GIAVDWVYGHVYWTDTGLDTISVGTMDGAWRKTLVDTGLKEPRAIVVDPEQGLMYWTDWG
SDPKIERAWMDGQQREVIVGDNITWPNGLAIDYVSRRLFWLDGKKGTLESSNLLGGDRMV
ITQHPASHLFGLEVFEDTVYFSDWEMFSLYGASKFNGSDKHVLSDDFFMPMDVSIVHTLK
QTKATNYCLDQSGRSYCTHLCLPVPPKEGHKNYTCACADGHMDEHGESCTGVEQELDFEM
KTPSELVDKITPTAVPTTKTVPVSSQTETPTSITTPESSMETVETTTVHSNGEVDSNKLL
ESQFNTTDFNIIRKHGVLSDSTAGESCGGPGRFLCSAGNCVEGQAVCDGKTDCADWGDEG
PVVCNEDEFLLIPSSSKVRAVSIKTGGHNVVVPPEEGRNIHHGGQRPSRRKPNTGIYSHK
VGSEEPPTGIFTGKNSTFDGLAVDWIHQNLYWTETMGEAICVMNLQNGRWRTLIKEDVKR
PFAIALDPIDGWVYFADWAYPASIERVGMDGWERRAIITEQIIWPSGLAIDFHSRKLFWS
DAKIDSIWSSDMDGKNRRIIVGSRRLSRPLALDILQDTLFWMDWDVDSVKRVDKKTGTQK
SLLIVQTLDNPLHMLVHAGWKQPKGRNRCGENNGGCSDLCLPTPKPFNSRRDFTCACGEG
FILAEDGVTCNSQ
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtcttcaactgttcttcttacttggcacagctcttgccaaagcagatttcatc
agttctgttctccaagggttcctgtttttgccagaagacagccttgacgacacctgtccc
gagggagacttcaagtgccactctcacgccgtgtgtatccgggaggggtggcgctgtgac
ggagagaacgattgttacgacggcagtgatgagctggactgccctgaaaccttctgtgcg
aagtcggagttccagtgccgggaccctcccagctgtatcccggcacgatgggcgtgtgac
ggggagcgtgactgcgcagactcgtctgacgaggccgacaccgcctgcgtctggttcaga
cgacggtccaagccgtgcgagggcggcagtttccggtgctccaactcccgctgcatcccg
ctgaagttcatgtgtgatggagaggatgactgtaaggacaactccgacgagtcctcgtgc
ccagtctgtcggctcggcaagtttctgtgcaagagcggaagctgcattcctgataagtat
cgttgcgacggtgtcgacgactgtaaggacaactcagacgaagagggatgcgaacccgaa
aacagcaccactccagtacaacacagaaccaccaccaaaacttctaccatttcaccctcc
accactaccacctcaaggaccacgtctacagcatctacgacgacaagaagcgagacttcg
ccaaagaccacaggaacctgcagcagtgaccagaccatgtgccgggacggaagcaaatgc
attcctaactcctggctctgtgacaaagccgaggactgcgctgacggaagcgatgaggat
aactgcgcagcggaatgcaggaaagaccagttcaggtgtaacgggagcgggatctgcctg
cctgcagcctggcgatgtgactcccagccagactgtactgatggctctgacgaggctggc
tgtggacaggagtgccttccagaggaatggaggtgtgacatcggaaggtgcatcaaggaa
aaatggcgctgtgatggcgacaaggactgtcctgatgggtcggacgagaaggactgtgaa
acccccacgtgcagtgagacgcagttccggtgccctgacggccgctgcctgcccagtaag
tggcggtgtgacggacaggacgactgtaaagacgggccccccgggtctgatgaagccggc
tgtgatgccagcagtgcgccgcagccgtgcgcaacgttcgaattccattgcggagacggg
gaatgcatacatgagacttgggtttgcgacggtgacggagactgtagcaacattgctgat
gagatggattgtgcagcagagccccctacccaaaaggagaaggactgcagcgcagggtac
ttccgatgtgaaccaaatgggtgtatctcggaggagaggatctgcgatggacaagtcgac
tgtgaagatgcttcagatgagcaagactgcgctgcaggtgtaaacgagtgtcttgataac
aacggtggatgtgaccagctctgtcagaatcttcgtgtcggtcacacctgtcggtgcaaa
gacggtttccgtctccaggacaacacaacgtgtgcagatcttgacgagtgcggagttccc
ggctactgcagccagctgtgtgagaacggcttcggcgtttacagctgcagctgtctgggc
gggtacgaactgcagacaggtggcaaatgtgtggcttcaggacaagagccgtacctgatt
gtttccaacagaagggagatcgtgaggttgaatgtcaggacaatgtccaaaacggtgatt
ctcaccaaggacctccgtagcgtcattgcagttgatgtggatgtcgccagggggaggcta
ttttggacggacgtcgggacacaaaaaattaacagcgcggctcttccgcctgtcgatgct
aaagaagcggctgccgacgacgtccaaaccatcttctcttccgacgtttctatccctgac
ggaatcgccgtggactgggtgtacgggcacgtgtactggacggacacggggctggacacg
atctccgtgggaacgatggacggagcctggcgcaaaactctggtggataccggcctgaag
gaaccgagagcgattgttgtggatcctgaacagggtctgatgtactggacggactgggga
tccgaccctaagatcgagcgggcctggatggacggtcagcagcgggaggtcatcgtggga
gacaacatcacctggcccaacggtctggcgatagattacgtcagcagaaggttgttttgg
ctggatgggaagaaaggcactctagaaagtagcaaccttctgggcggagacagaatggtc
atcacccaacacccggcttctcacctgttcggtttggaagtgttcgaggacaccgtgtac
ttctcggactgggagatgttcagtctgtacggcgccagcaagttcaacggcagcgacaag
cacgtgctgagcgacgacttcttcatgcctatggacgtcagtattgtacataccctaaaa
cagacgaaagccacgaactactgtctcgaccaatcagggaggtcgtactgcacacatctt
tgtctccctgtgcctccgaaagaaggacacaaaaactacacgtgcgcatgcgcagatggc
cacatggatgaacatggagaatcgtgtacaggtgttgaacaagaattagacttcgagatg
aaaacaccatctgaacttgtggacaaaataacaccaaccgcggtgcctacaacaaagaca
gtcccagtatcatcccaaacagaaacaccgacatcaataactacgccagaatcgtccatg
gagacggttgaaactacgacggttcactcgaacggggaggtcgactcgaacaagttactg
gaaagccagttcaacaccacagacttcaacatcatccgcaagcacggggttttgtctgac
tccacggcgggagagtcctgtggaggcccgggaaggtttctgtgttcagccggcaactgt
gtggaagggcaggccgtctgtgacgggaaaacggactgtgctgactggggtgacgaggga
ccggttgtctgcaatgaagatgaattcctgctgatccccagcagctcgaaagtccgggca
gtcagcatcaaaacgggcgggcacaacgtcgtggtgccgcccgaagaaggccggaatatc
catcacggtggacagcgaccgtccagacggaaacccaatactggcatttacagtcataag
gtgggttcggaagaaccgcccacagggatcttcacgggaaagaactccacgtttgacggt
ctggccgtggactggatccaccagaacctgtactggacggagaccatgggtgaggccatc
tgtgtcatgaacctacagaacgggcgctggaggactctcatcaaggaagacgtcaagagg
cccttcgctattgccttggaccccatcgatgggtgggtgtactttgcggactgggcctac
cccgccagtattgagcgggtcggaatggacggatgggaacgacgggctatcatcactgag
cagatcatctggcctagtgggcttgccattgacttccactccagaaagctgttctggtcc
gatgctaagatcgacagtatctggtccagtgatatggacgggaagaaccgccgcatcatc
gtgggcagtcggcgtctgtccagacctctggcactggacatcctacaggacacactgttc
tggatggactgggacgtggactcagtgaagagggtggataagaaaacgggcacgcagaaa
tcattactgatagtacagacgctggacaacccgctacacatgctggtacacgcagggtgg
aaacaacctaaaggacgaaaccgttgcggtgagaataatggtggttgttccgacctctgt
ctgcccacccctaaacccttcaacagccggagagacttcacctgcgcatgcggggaaggg
ttcattctcgcagaggacggagtcacctgcaattctcagtaa
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