Branchiostoma floridae (Florida lancelet): 118431499
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Entry
118431499 CDS
T01074
Name
(RefSeq) pumilio homolog 3-like
KO
K14844
pumilio homology domain family member 6
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118431499
03009 Ribosome biogenesis [BR:
bfo03009
]
118431499
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
118431499
Ribosome biogenesis [BR:
bfo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
118431499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
LepB_GAP_N
PUF_NOP9
Sulfotransfer_4
DUF2818
Motif
Other DBs
NCBI-GeneID:
118431499
NCBI-ProteinID:
XP_035698633
UniProt:
A0A9J7MCZ9
LinkDB
All DBs
Position
15:13084494..13094583
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AA seq
653 aa
AA seq
DB search
MTVTMEDTEPEKKLKLKRTKGTATGPPTKKVKSFNDQSQELAGGKLFKKTDQKAKGKKIK
KDGKVKKSSDGEEKTGQKKKVPMKKGKKRKSEGDGESGESPEKKQKLVEMKKKERKEVRR
QLKNNYPLLKRTKEIWEVVRRHDCKKETRAKLMTELYGLIQGRVKELANAHDSVRVMQCC
IQFGTLEQRATLFEELKDELVNMSKSKYAKFSVRKLLKYGTKEQKAEIMKSFHGHIKKLV
RHTEASSVLEYAYNEWANQKQRKAMLQELYGNTYVVFKAPGTTTLQELFTLHPDKKELVM
KEFKESLTPLLEKTVVKHTLVHKALLEFFTHAEGRLRAEMIEAIRESLIHILHTHDGSRV
TMHCLWHGTAKDRKVIIKTMKTFMQKICQEEFAHHTLLALFDVVDDTKLVSKAILQVWSL
YTMLNLLIPCFKIARRSSFASMDKDRYSIALCLFIFVAMISFLFVYNHANSKKDPTMRRQ
ELLEFVSVPLLKFFSEHTKDLVFDKAQSQVALATLEYAQGDKTAAYEALSVLAAEDFMPQ
GRDGDESQMHLVEHPAGHLFLKRLLTWDKNQREAGQTQGFFALALLSDLEPGAMASWAKV
NRGAFVIVSLLDTGIPEVVKRVQKELEPQKTMLKNIKVAGTDILVKKLEAASA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacaatggaggacaccgaaccagagaagaagctcaaactcaaacgcaccaag
ggaacagcgactggtccacccaccaagaaagtcaagtccttcaatgaccagtctcaagaa
ctcgcaggagggaaacttttcaagaaaacagaccagaaggcaaagggcaagaagattaag
aaggacggcaaggtgaagaaatcttcagatggagaagaaaagacaggacaaaagaaaaag
gtacccatgaagaaagggaagaagagaaagagtgaaggagatggtgaaagtggggaaagc
ccagaaaaaaagcagaagctcgtggagatgaagaagaaagagcggaaggaagtccgcaga
cagcttaagaacaactacccacttctcaagaggaccaaggagatctgggaagttgtcaga
agacatgactgtaagaaggagaccagagccaaactgatgacggaactctacggtctcatc
cagggcagggtcaaggagcttgccaatgcccatgactcagtgcgagtgatgcagtgttgt
atccagtttggtactctggagcagagggcaacattgtttgaagaactcaaagatgagttg
gtgaatatgtccaagtccaagtacgcaaagtttagtgtcaggaagttactgaagtatggg
accaaagaacagaaagctgagatcatgaagagttttcatggtcacataaagaagcttgtc
agacatacggaagcctccagtgtgctggagtatgcttacaacgagtgggccaatcagaag
cagaggaaagccatgctgcaggagctgtacgggaacacctatgtggtcttcaaggctcct
ggcaccacaactttgcaggaactcttcacccttcacccagacaagaaagaactggtcatg
aaagagtttaaggaatctctcaccccactgttggagaagactgtggtgaaacatactctg
gtacacaaggctttactggagttcttcactcatgctgagggcaggcttagagcagaaatg
attgaagccatcagagagtccctcatccacatcctgcacacccatgatgggtcaagggtc
accatgcactgcctatggcatgggacagccaaggacagaaaagtcatcatcaagacaatg
aagacctttatgcagaagatttgccaggaagagtttgcccaccataccctgctggcactg
tttgatgtagttgatgacaccaagttggtctctaaggccatcttacaggtatggagtctt
tacactatgttgaatttgttgatcccttgtttcaaaatagccaggaggtcaagcttcgcc
agtatggacaaggatcgttactccatagccctttgcctcttcatatttgttgcaatgata
agtttcttgtttgtttacaatcatgctaacagcaagaaggaccccaccatgagaagacaa
gagttgctagagtttgtgtctgtaccgttgctgaagttcttctctgaacacaccaaggac
ttggtgttcgacaaggcacagagccaagtcgcactagctaccctagaatatgcacagggt
gataagactgcagcctatgaggccttgtcagtgttggcagctgaagacttcatgccacaa
ggaagagatggggatgaaagtcagatgcaccttgtagaacacccagcgggtcaccttttc
ctgaagaggctgctgacatgggataagaaccagagggaggctggacagactcaagggttc
tttgccttagcgctgctgtctgaccttgaaccaggtgccatggcttcatgggccaaggtc
aaccggggagccttcgtcattgtcagtctcctagatactggcatcccagaagtagtgaag
agagtacagaaggagttggagccacagaagacaatgcttaagaacattaaggttgctggt
acggacatcttggtcaagaaactagaagctgcatctgcatag
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