Branchiostoma floridae (Florida lancelet): 118431536
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Entry
118431536 CDS
T01074
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfo03036
]
118431536
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118431536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
118431536
NCBI-ProteinID:
XP_035698673
UniProt:
A0A9J7MD29
LinkDB
All DBs
Position
2:complement(33818903..33908978)
Genome browser
AA seq
2077 aa
AA seq
DB search
MFVCFKLSVIVSKSPEIRTPVSPGLYQVDQLTLPTTPCARHCGRKKQIWRLNAGKISQFR
TNRVPEIHDSSHAESTSTGAHEGRPPSPLQQVMEQFGSLSYGAGVERVGGRTQSHIPAAS
PSLTTVEGLPEAEFDGNFLPPDISTTFQDPDTGSNKVSQPQNIPPYTLENGDNSREQPSS
AESGDSRKMTKGSDESNSGSEDSNDEDQSKSGSSSSSQSGSSSDSGSQSESESKSGSGSG
SSSQSGSGNESTKGDNQEEEEEDGDESNDQATDNKDQAGKMPKKDRLADLKQMWDEYPDM
YGVRRSSRARKEPSRYNESDEDNEDEDDDEDHRKRRKNISAKSRRKRKSSENWEANSDSD
GDDDDDDDDDNDSGSSDDYTVKRRAKPAARPAARPQARVRGKAPIKGKSAANNQGRKRAG
SLSEREQKRLSRRKAAANVSYKEESPDATDSDDLMEIAAKEEENDDAEAIERVLNHRTGK
KGSTGAITTMYAADAAVANKPPDPEADETETQYLIKWKDWSHLHNTWESEATLAEQKVKG
IKKLENYMKKKNDLQQWKDQASPEDLEYLECQSEMNEDLLSAYQQVERIIGMAYPAAPPA
YPAAPQPLEHGTQSHRSKTSGGRVSRNEGAPAQQPAKNSASGFPDYLVKWQGLPYSECSW
EDGELISMYFPDAVDGYNVRNKSQKIPGKMTAKVLKQRPRFVALKKQPLYLGGTERLELR
DYQLDGLNWLAHSWCKYALFLLADVMSRNKVSLFVCLFVCQCSVRPLVLLSTMAAWQREF
SNWAPDMNVIVYLGDVMSRNKIREYEWCHPGNKKLKFNCLLTTYEILLKDKSFLGGVEWA
CLVVDEAHRLKNDDSLLYKTLKGFDSNHRLLITGTPLQNSLKELWALLFFIMPARFLKWE
EFEEEHQNADKNGYAGLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQFYRWI
LTKNYKALTKGMKGNTSSFLNIMMELKKCCNHSFLVRPPEDPPPGQSLVTQLLRSSGKLF
LLDKLLVRLRDTGHRVLIFSQMVRMLDILAEYLTMRHFPFQRLDGSIKGEIRRQALDHFN
AEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDIQAQSRAHRIGQRKQVNIYR
LVTKGSVEEDIIERAKKKMVLDHLVIQRMDTSGRTVLSKSSAPGSTSTPFNKEELSAILK
FGAEELFKENEGEEEEMPEMDIDDILRRAETAEMVDDAGAGHELLSQFKVANFSTMEEEL
PEAAGKTWEDIIPAADRQKVDDEEKQRELIEMHLPPRQRKFVTKLQYGSESEGSTRRGRK
RKRASSSSESDSDSDADAKPRKRGRPRTVPRDTIKGFSDPEVRRFVKSYKKFGMPLTRLE
AIAGDAELQEKSYADLKRLGDLLHDGCVKAIEEYEKQMKENPEFDGKKRGPTLKLSTVTV
NAPSILRHEEEMLPLAKAIPDDPEDRKKFRLPCRAKLAHWDVDWAVEEDSALLVGIYEYG
MGSWDTVQMDPELNLSDKILLDEDKKPQAKHLQSRAEYLIRLLNKDQLKKEALAEGKVIK
KERRPRMPKQPKDPTTVKRPKAKVKFVERKENEAPLDEPNLDSEEHREPLEEGEVEDSND
KTDIKEPVVKKVKRAKKPKTPKIVKEPSSKTTPAKPKDKNKKDPLNADLDPDASHSVLED
MDDLDKETFNMCKERMRPVKKALKQLDKPEEGLTEEEQLNHTRQCLLKIGDRIMECLKEW
TEAEEVKKWRNNLWIFVSKFTEFDARKLFKLYKHAVKKREEEKEKQTKEKPKPAASSNSS
VVKKEGSDSQHAHGAGKRPQGSSERTSGWGSDSASRDSFTSNGPWPGTSASSSYGHTAGR
SGAGGGADRWGHDRYQPGRDPFRERHRGEVSSAYNRTGSRDYDSHRTRDSRYNAEHRWDR
DRDRDRERDHRDRDRGDRDYRSSRDHRDSRDSSRGDSSSRHHRAGNKEDGGSSHRSARPD
SSGERDQRLHHSQSDHKRRKRDDSWSSADDKKKRKDGGHGGGGVHRSSTQEHRSREDTKD
HRALIEHRSPLEHRSPLEHRSPLDHGDRSNERTDSRH
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtttgttttaaattgtccgttattgttagtaaatcacctgaaatccgcacacct
gtctcacctggcctgtatcaggtggatcaattaactctacccacaaccccctgcgcgcga
cactgtgggaggaagaagcaaatatggcgactgaacgcgggcaaaatttctcagtttagg
accaacagggtgccggaaattcacgattcttcgcacgcagagtcgacctctacaggcgca
catgaggggcggccaccatcgcctctccaacaagtgatggaacagtttggttcgttatct
tacggggccggtgttgagcgagtcggcgggcgcactcagtcccacatcccggctgcctcg
ccctctcttaccacagtcgagggcctgccagaggccgagttcgacggcaactttctccct
cccgacatttcgacgactttccaggaccccgacactgggtccaacaaggtgtcccaaccc
cagaacatccctccttacacgctagaaaacggcgacaactccagagaacagccgtcttcg
gccgagagtggagactcaagaaagatgactaaaggctcagatgagagtaactctgggtca
gaggacagcaacgatgaggaccaatcaaaatccggctccagctccagcagccaatcagga
agcagctccgactccggcagccaatcagaatcagagtccaagtccgggtcagggtccggg
tccagttctcagagcgggtctggaaatgagagtaccaagggggataatcaggaggaggag
gaggaggatggagatgaatcgaatgatcaagccactgataataaggaccaagctggcaag
atgcccaagaaggacagacttgccgatctcaaacagatgtgggatgagtatccggacatg
tacggtgtgcgccggtccagccgcgcccggaaggaacccagcagatataatgagtctgat
gaagataacgaggatgaagacgatgatgaagatcaccgcaaaagaagaaaaaacatatca
gcaaaatccagaagaaaaagaaaatcgagtgaaaactgggaggcaaacagtgacagtgat
ggtgatgacgatgatgatgatgatgatgataacgactccggcagcagtgatgactacaca
gtgaagagacgagccaaacccgcggccaggcccgcagcacgcccgcaggccagggtcaga
gggaaagcccccatcaaggggaagtcggctgccaacaatcaggggcggaagcgcgccggc
agtctgagcgagcgggagcagaaaagactctccaggagaaaagctgctgctaatgtcagt
tacaaagaggagagtccggatgcgaccgactcggatgatctgatggagatcgctgcaaag
gaggaggagaatgatgatgctgaggccatcgagcgggttctgaaccacaggaccggcaag
aaagggagcactggtgcaataacgacgatgtacgctgctgacgcggccgtggcgaacaag
cctcccgacccggaagcagacgagacggagacccagtacctgatcaagtggaaggactgg
tctcacctgcacaacacctgggagtcagaggccaccctggcagagcagaaggtcaagggc
atcaagaagctggagaactacatgaagaagaagaacgaccttcaacagtggaaggaccag
gcatccccagaggacctggagtaccttgagtgccagtcggagatgaacgaagacctcctg
agtgcctaccagcaggtggagagaatcataggtatggcgtatcccgccgccccgccggcg
tatcccgccgccccacagccgcttgagcatggcacgcaatcccacaggagcaagacctca
ggtgggagagtgtcacgtaacgagggggctcctgctcaacagccagcgaagaactctgcg
tcggggtttcccgactatctagtgaagtggcaggggctcccgtactccgagtgctcgtgg
gaggatggagagctcatctccatgtatttccccgacgccgtcgacggctacaacgtcagg
aacaagtcccagaaaatcccgggcaagatgaccgcaaaggtccttaagcagagacccaga
tttgttgcccttaagaagcagcccctgtaccttggaggaacggagaggctggagctgaga
gactaccagctggatgggctgaactggctggcgcactcctggtgcaagtacgcactattt
ctcctggcggacgtcatgagcaggaacaaggtgagtttgtttgtttgtttgtttgtttgt
cagtgttctgttcggccccttgtgctgctatccaccatggcagcctggcagcgggagttc
agcaactgggcaccggacatgaacgtcatcgtctacctgggggacgtcatgagcaggaac
aagatcagagagtatgagtggtgccatcctggcaacaagaagctcaaattcaactgtctg
ctgaccacctatgagatccttctcaaggataagtcgttcctgggcggagtagagtgggcg
tgtctagtcgttgacgaggcccacagacttaagaacgatgactccctcctgtacaagact
ctgaagggcttcgactccaaccacagactcctcatcacaggcacacctctgcagaactcg
ctcaaggagctttgggctctgctcttcttcatcatgccagccagattcctgaagtgggag
gagtttgaggaggagcaccagaacgcggataagaacggttacgccggcctgcacaaggag
ctggagcctttcctcctcaggagggtcaagaaggacgtggagaagtctctacccgccaag
gtcgagcagatcctcagggtcgagatgtcagccatacagaaacagttctacaggtggatc
ctgacaaagaactacaaggctctgaccaaggggatgaaggggaacaccagcagcttcctt
aacatcatgatggagctcaagaagtgctgcaaccactccttcctggtcagaccacccgag
gacccgccgcctgggcagagtctcgtcacgcaactgctgaggagtagcgggaagctgttc
ctgttggacaagctgctggttcggctgagagacaccggccatcgggtgctgatcttctcc
cagatggttcgcatgctggacatcctggcagagtacctcaccatgagacacttccctttc
cagagactggacggttccatcaagggtgagataagaagacaggcgctggaccacttcaac
gctgaagggtcgcaggacttctgtttcctgttgtcgacgcgagctggcgggttggggatc
aaccttgccacggctgacaccgtcatcatcttcgactcagactggaacccacagaacgac
atccaggcgcagtccagggcacacaggataggacagaggaaacaggttaacatctaccgg
ctggtgaccaaaggcagtgttgaggaggacatcatcgagagagcgaagaagaagatggtg
cttgaccacctggtgatacagaggatggacacctcaggcaggaccgtcctctccaagtct
tccgctccgggcagcacctccaccccattcaacaaggaagagctgtctgctatcctcaag
tttggtgctgaggaacttttcaaggagaacgaaggggaggaggaggaaatgcctgagatg
gacattgacgacatcctgcggcgtgcggagacagcggagatggtggatgacgcaggggcg
gggcacgagctgctgtcacagttcaaggtcgcgaacttctcgactatggaggaggagctt
ccagaggctgctgggaagacgtgggaggacatcataccggcagccgataggcagaaggtc
gatgatgaggagaaacaacgggaactcattgagatgcacctgccgcccaggcagaggaag
tttgtcactaagctccagtacggcagcgaatcggaaggctcgacacgtcgcggcaggaag
agaaaacgcgcgtcctccagcagcgagagtgactcagactctgatgcagacgccaaacct
cgcaagcggggccggcctaggacggtgcccagggacaccatcaagggattctccgatcca
gaagtcaggagatttgtgaagagctacaagaagtttggtatgcctctgacaaggttagag
gctatagcaggcgatgctgagctacaggagaagtcgtacgcggacctgaagcggctggga
gacctgctgcatgatggctgcgtcaaggctatcgaggaatacgaaaaacagatgaaggag
aatcccgagttcgatggaaagaagcgcggcccaacactaaagctctccacggtgacggtg
aacgctccctccatcctccggcacgaggaggagatgctcccgctcgccaaggcgataccc
gacgacccagaggaccgcaagaagttccgcctgccgtgccgggcgaagctggcgcactgg
gacgtcgactgggccgtggaggaggattcggctctgctggtggggatatacgagtacggg
atgggcagctgggacactgtgcagatggatccagagctgaacctatcggataagattctc
ctggatgaggataagaagccccaggccaaacatctccagtcccgagccgagtacctcatc
aggctgctcaacaaggaccagctcaagaaggaggccttagcggaaggaaaggtcattaag
aaggaaagaagaccgaggatgcccaagcagcccaaagaccccaccaccgtgaaaagaccc
aaggccaaagtcaagttcgtggagaggaaagagaacgaggcgcccttggacgagcctaac
ttggactccgaggaacatcgggagcctctagaggaaggggaggtggaggacagcaacgac
aaaaccgacatcaaggaaccggtcgtcaaaaaagtcaagagggccaagaaacccaaaaca
cccaagattgttaaagagccttccagcaaaactactccagctaaacccaaggacaagaac
aagaaggaccccctcaacgctgaccttgatcctgacgcatcacattccgtgttagaggac
atggatgatctcgacaaagaaacattcaacatgtgcaaggagaggatgagacccgtaaaa
aaggcactgaaacagctggacaagcctgaagagggccttacagaggaggagcagctaaac
cacacccggcagtgcctcctgaaaataggcgaccgcatcatggagtgcctgaaggaatgg
acagaagccgaggaggtcaagaagtggagaaacaatctgtggatatttgtgtccaagttc
accgagttcgacgccagaaaactcttcaaactatacaaacatgctgtcaaaaagagggag
gaggagaaagagaagcagaccaaagaaaagccgaagccggcggcgagttccaactccagt
gtggtgaagaaggaagggtcggacagccagcacgcacacggggcggggaagagaccccag
gggagctccgaaaggacctcagggtggggcagcgactccgccagcagggacagtttcaca
agtaacggcccctggcccggcaccagcgccagctcgagttacggccacacagcgggcagg
agtggcgcagggggcggggcggacaggtgggggcacgacaggtaccagcccggcagggac
cccttcagggaaaggcaccgtggggaggtcagcagtgcgtacaaccggacgggttcccgt
gattacgattcccatcggacgcgagactcgcggtacaacgcggaacaccggtgggaccgc
gatcgggacagggacagagagagggaccatcgggacagggatcggggcgatcgggactac
cgatcatcgcgggaccatcgagattcgcgggattcgtcccggggtgactcctcttcgcgg
caccaccgcgcagggaacaaggaggacggcggtagctcccaccggagcgcgcgaccggat
tcctcgggggagcgtgatcagaggttgcaccattctcagtcggaccacaaacgcaggaaa
agggacgattcctggtcgtctgcggacgacaagaagaagcggaaagatggcggccacggc
gggggtggcgtgcacaggtccagcacacaggagcacagatccagggaggacacgaaggac
cacagggccttgatagaacaccgctcccctctggagcacaggtcgcccttagaacacagg
tctccgctcgaccacggggacagaagtaacgaaagaacagactccagacactga
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integrated database retrieval system
