Branchiostoma floridae (Florida lancelet): 118431598
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Entry
118431598 CDS
T01074
Name
(RefSeq) LOW QUALITY PROTEIN: multiple PDZ domain protein-like
KO
K06095
multiple PDZ domain protein
Organism
bfo
Branchiostoma floridae (Florida lancelet)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
Motif
Other DBs
NCBI-GeneID:
118431598
NCBI-ProteinID:
XP_035698733
UniProt:
A0A9J7MD70
LinkDB
All DBs
Position
15:17725967..17819521
Genome browser
AA seq
2587 aa
AA seq
DB search
MPVGQQEAEHAVDVLQKMQEQLRAGGDSSVDLASIIHMLDSPLFRQILNIQASVKQLKKQ
VNKQTNKHTGLRQTVENSPPSAVQDFEFSPTGHLVMAPKGKASNGTTVVEVNGQPAEAVA
VHGAPSLMSAAPQMGEEDFQRAIQAAAQGREVENIKLYKPETGGLGFSVVGLRSENRGEL
GIFVQDIQPGGVADRDGRLKESDQILAIDHQLLDASISHQEAISILQKAHGIVELVVARG
GIPEPDASDSRGPSNLSELAEKLGVTQWSHVEMIELVNDGRGLGFGIIGGQTRGIEVKTI
VPQGVADRDGRLKPADHILQIGDTPLKGMGSEQVANVLRQSGSHVRLLIARGKLNNTQAA
PAATSVKQAEEVESAPSAEIEQFEAELTKDSQGLGITIAGYVGEKSSEELSGIFVKSIAP
GSAADRDGRIRVNDQIVEVDGRSLQGFSNQQAVEVLRSTGQVVQLKLARYKDGPKFLQPS
ERGSTPSPSASPAITPSPAPDLSETPSLEQAPPPYPYLGEEMPSPIPRDESPALGYPKEG
QVNLEDIQLFTDASYDLTPEAEEGIKQYWQDQAGEDMEIVVAHISKFLSLTVIQMTVSVI
LLSVKILLQYMYLTPEAEEGIKQYWQDQAGEDMEIVVAHISKFLSLDLTPEAEEGIKQYW
QDQAGEDMEIVVAHISKFREGGGLGISLEGTVDVEDGQEVRPHHYIRSILPDGPVGVDGK
LKGGDELLEVNGHQLLGLDHREVVGILKDLPTNVRIVCGRRPEPVERPPDIPTIRPLDVE
ELNSKRMSFTGSPDVGMMARARSEGSIPPAVESESPSLDKSKSRSLEPLSQLAMWSPDIQ
TIELPKGEKGLGFSILDYQCELAMWSPDIQTIELPKGEKGLGFSILDYQDPLSPNQMVIV
IRSLVHGGVAQQDERLVPGLMSVNNAFNLEHANLETAVQALKGAPPGIVRIGVSKPLPVP
ESFQDEEPSFSRPPPVVPPPEPRSTPPQSPIMEETSSFASITMATATIATVTEDESDMME
AKELQVSQVEQVQAPGVEVRRRPPTPPPKPTLRKVEVVVKEAAPPPVPIEPPPVIIREKL
LGTNHRPQRGSYVILKRCEIGTQTNIEVTPMGARESSLKETQEVDISFGSTGSRSTSSET
LTSVGDLSLPGGEPRLLPSSLEQTVEINKGNSSLGLTVNPDKEGNGIIVKSITHGGAISK
DGRITVSDVITAVNGESTKGLNIYQAKALLRRQSLLGGDIRLNGESTKGLNIYQAKALLR
RQSLLGGDIRSTRPRLCSGGSLCWVGTSGETFVCLFVYVTVGDVITAVNGESTKGLNIYQ
AKALLRRQSLLGGDIRDNDNSRFILRNCHSITFIKAEDIATYKETAAAAQTSFTTSVVTR
TPEPSRPPPQLPTVPPPPTNQESPSQDKPFFSPYQSQKIQKMSPPAHLKPFTTISPAKSG
EPTKMVQIYREPNQSLGISIVGGKSMVVNRTEVQCQGIFIKHVLEESPAGKDGNLKPGDR
VLEVDGMDLREASHDQAVEVVRNAGNPVCFLIHSVDGMDLREASHDQAVEVVDGMDLREA
SHDQAVEVVDGMDLREASHDQAVEVVDGMDLREASHDQAVEVVDGMDLREASHDQAVEVV
RNAGNPVCFLIQRLAPSGQEALSDSMEISPGPVLEAGVEQQVAEGAPVMHFSSPTSEAPP
SNDGSIVTATAVMVNESSDSEEEDEFGYTYKTVQKRYGDLNGDLHIVELQKGERGLGLSL
AGNRDRTRTSVFVVGVAPDGAAAEDGRIQVGDELLEINGEVLYGRTHHSASQVIKSIPPG
VVKIVLLRNEEATESLSMSPIRFLTTSSGEFYGSPSDPGQDAVERRVSSFLSPDFSISLL
GQDENSHPGSPVPPSMEPTMVSTLHHSPWIPCSKTPTGLGFAIGEGRDISTGDPGIFVKN
ITDGGAAHEDGRLQMGDQILGVDDESLVGLSYDQAVGILKKTQGTVRLTVCSDNRRYIPT
DQPSFIQPTQVNHAPVTQTGLDQAPIVDEITGLFVNHAPVTQTGLDQAPIVDEITGQPRT
GHSDWTGPGSHSGRDHRSTTHRPLRLDWTRLPFWTRSQVYHAPVTQTGLDQAPIVDEITV
SGVPYEKVEEDVDQLEESSPPQEHPDHMDPRTCPIIPGRITVIDIEKGKTGLGLSIVGGS
DTLLGAIIIHEVYEEGAAAKDSRLWAGDQILEVNGEDLRNATHDHAINVLRQTPSRVRLI
VFRDENQYKEEDLYDVFSVELEKRIGKGLGLSIVGRRNDVGVFISDVVKGGVAEQDGRLM
QGDQILSVNGEDMRSATQDNAAAVLKTAQGTVVLTIGRLKASSQASRRTSMASSSSHTLD
KAGSTGSMDRAGIITGPRRVAAAADSADFPTEGVRMVEMYKGPQDSLGVSIAGGVGSPLG
DVPIFIAMVQANGVAAQTQKLRVGDRILSINGQALEGVTHAQAVNMLMQTTGRVVLEVSQ
GDELANMAGGDAAPSVASVMATSAESSSPLNFNDDLGGPTQYKTIELERGPDGLGFSIVG
GHGSPHGDLPIYVKTVFAKGAAAEDGRLKRGDQIVAVNNEPLEGVTHEEAVSILKKSKGK
IVLTVLT
NT seq
7764 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgggacaacaagaagcggagcatgctgttgacgtactgcagaagatgcaggaa
cagctgcgtgctggcggggacagcagtgttgaccttgcctccatcatccacatgctggac
agcccgctgttccgacagatcctcaacattcaggcttctgttaaacagctcaaaaaacag
gtaaataaacaaacaaacaaacatacaggcctccgtcaaacagtagagaactcccctccg
tctgctgtacaagactttgagttctccccgaccggtcacctggtgatggcccccaagggt
aaggccagcaacggcactacggtggtcgaagtcaacggacagccagcggaggcagtggct
gtccatggagccccctcccttatgtcagctgcaccccagatgggagaggaggacttccag
agggccatacaggcagcagctcagggcagagaagtggagaacatcaagctgtataagcct
gagactggaggtctgggcttcagtgtggtgggactgaggagtgagaacaggggagagctg
ggcatctttgtacaggacatccagcctggaggggtggcggacagggatggtcgactgaag
gaaagtgaccagatcctggccattgaccatcagctgctggatgccagcatctcccaccag
gaggccatctccatactgcagaaggcacatggcatcgttgagcttgtcgtggcgcgcggc
ggtattcccgaaccggacgcctccgacagcagggggccttccaacctgtccgaactcgct
gagaagctcggtgtgacacagtggtcgcacgtggagatgatcgagcttgtgaacgacggc
cgaggtctcggcttcgggattatcggcgggcagacgaggggcatcgaggtcaaaaccatt
gtacctcaaggggtggcagacagggatggccggttgaagccagccgaccacatcctgcag
atcggagacactccactgaaggggatggggagtgagcaggtcgctaatgtgctacggcag
tcaggcagtcatgtcagacttctcatagcgcgtggcaagctcaacaacacacaggccgca
cctgcagctacaagtgttaaacaggcagaagaggtggagagcgcaccgagtgcagagata
gaacagtttgaagcagaactcacgaaggacagccagggactgggcatcaccatagctgga
tatgtgggtgagaagtcctcggaagaactgtcgggaatctttgtgaagagcatcgcgccg
ggaagtgcagcagacagggacggcaggataagggttaatgaccagatcgtggaggttgat
ggccgtagcctgcagggtttctctaaccagcaggcagtggaagtcctacgcagcacaggg
caggtggttcagctcaagctggctcgctacaaggacgggcccaagttcctacagccttca
gaacggggctccaccccttcaccgtcggcctctccagccatcaccccctcccccgcgcct
gacctgtcggagaccccctccctggagcaggccccccctccctacccctaccttggggag
gagatgccctcccccatcccccgggacgagtcccctgccctggggtacccgaaggagggc
caggtcaacctggaggacattcagctcttcaccgatgctagttatgacctcacaccagag
gctgaagaaggcatcaagcagtactggcaggaccaggcaggagaagacatggagatcgtt
gtagcgcacatctccaagttcctatctctgactgtaatacagatgactgtttccgtaata
ttactgtcagttaaaatacttttacaatacatgtacctcacaccagaagctgaagaaggc
atcaagcagtactggcaggaccaggcaggagaagacatggagattgttgtggcacacatc
tccaagttcctctctctagacctcacaccagaagctgaagaaggcatcaaacagtactgg
caggaccaggcaggggaagacatggagatcgttgtggcgcacatctccaagttccgtgag
ggcggaggcctgggtatcagtctggagggtaccgtggatgtggaggatggacaagaggtc
cgtccgcatcattacatcaggtccatcctgcctgatggaccagtaggagtggatgggaaa
ctgaagggtggagatgaactgttagaggtaaatggtcaccagttgcttggtctggaccac
agagaagtggtcggcatcctgaaggacctcccgactaacgtgcgcatcgtctgcgggcgc
cgaccggagcccgtagagcgcccgccggacatccccaccatccgccctctggatgtggag
gagttgaacagcaagaggatgtctttcacagggtctcctgatgtggggatgatggctcgg
gccagatctgaggggtccattcctccagctgtggagtctgaatccccctccctggacaag
agcaagtcccgttcgctggagcccctgagtcagctggccatgtggagtcctgacatacag
actatagaactgcctaagggggagaagggactgggattcagcattctggactaccagtgt
gagctggccatgtggagtcctgacatacagactatagaactgcccaaaggggagaaggga
ctgggattcagcattctggattaccaggacccgttgagcccaaaccagatggtgatagtg
atccgaagccttgtccacggcggcgtggcgcaacaagatgagcgcctcgtgcctggactc
atgtccgtaaacaacgccttcaatctcgagcacgctaacctggaaacggccgtgcaggcg
ctgaagggagctccgcccggcattgtgcgcatcggcgtgtccaaaccactgccggttcct
gagtcattccaggacgaagaaccgtccttctcacgaccaccccccgtggtcccccctccc
gagccccgctccacacccccccagtcacccatcatggaggagacctcctccttcgcatct
atcaccatggcgaccgctaccatagcgacggtgacggaggatgagagcgacatgatggag
gctaaggagcttcaggtgtcgcaggtggaacaggtccaagccccaggagtggaggtccgt
cgcaggccccccaccccacctcccaaaccaaccctgcggaaggtggaggtggtagtgaag
gaggctgccccgccccctgtacccatcgaacctccacccgtcatcatcagggagaagttg
ctcggaacgaaccatcggccccagcgggggtcctacgtgatcctgaagcgctgcgagatc
ggaacccagaccaacatagaggtcacccctatgggagcacgagaaagctccctcaaggaa
acccaggaggttgacatcagctttggcagcaccggcagcaggtcaacgtcctctgagacg
ttgacctctgtgggtgacctgtcgttgccgggcggggaacccaggctgttgccgtcctct
ctggagcagacagtggagatcaacaaggggaactccagcttgggtttgaccgtgaacccc
gacaaagaggggaacgggatcatcgtaaagagcatcacgcatggcggcgccatcagtaag
gacgggcgtatcaccgtgagcgacgtgatcacggctgtgaacggagagagcaccaagggg
ctgaacatctaccaggccaaggctctgctgaggaggcagtctctgctgggtggggacatc
aggttgaacggagagagcaccaaggggctgaacatctaccaagccaaggctctgctcagg
aggcagtcactactgggtggggacattagatctaccaggccaaggctctgctcaggaggc
agtctctgctgggtggggacatcaggtgagacttttgtttgtttgtttgtttatgtaacc
gtgggcgacgtgatcacggccgtgaacggagagagcaccaaggggctgaacatctaccag
gccaaggctctactcaggaggcagtctctactgggtggggacatcagagataatgacaac
agcaggttcattctaaggaactgtcacagcatcaccttcatcaaggcagaagacattgcc
acctacaaggagaccgcagcagcggcacagaccagttttaccacatcggtggtcaccagg
actcctgaacccagccgccctcccccacaactccccactgtccctcccccacctaccaac
caggagagccccagccaggacaagcctttcttcagtccgtaccagtcccagaagatacag
aagatgtctcctccggcccacctgaagcccttcacgaccatctcacccgccaagtctggg
gaacccaccaagatggtacagatctacagggaacccaaccagtcactgggcatcagtatt
gtaggagggaagtcgatggtagtgaaccgtacagaggtgcagtgtcagggaatcttcatc
aaacatgttctggaggaaagtccagccggcaaggacggaaacctcaagcctggggacagg
gtgctggaggttgatggaatggacctgcgcgaggccagtcatgaccaggcggttgaggtg
gtgcgtaacgctgggaaccctgtctgcttcctcatacacagtgttgatggcatggacctg
cgagaggcgagtcatgaccaggcggttgaggtggttgatggaatggacctgcgcgaggcc
agtcatgaccaggcggttgaggtggttgatggaatggacctgcgcgaggccagtcatgac
caggcggttgaggtggttgatggaatggacctgcgagaggcgagtcatgaccaggcggtt
gaggtggttgatggcatggacctgcgagaggcgagtcatgaccaggcggttgaggtggtg
cgtaacgctgggaaccctgtctgcttcctcatacagaggctggcaccgtccggacaggag
gcgctatcagattccatggaaatatcgcccggcccagtgctagaagccggggtagagcaa
caagtcgctgagggtgcaccagtcatgcacttcagctcgccaacgtccgaagccccgcct
agcaacgacggctccatcgtcacggcaaccgctgtcatggtgaacgagtcgtccgacagt
gaggaagaggatgagtttggatacacctacaagacagtgcagaagcggtacggtgacctg
aacggtgacctccacatcgtagagctgcagaagggagagcgcgggctgggcctgagtctt
gccgggaaccgagaccgcacgcgcaccagcgtcttcgtggtgggggtggctccggacggg
gcggcagccgaggacggccggatacaagtgggggacgaactcttggagataaatggagag
gtgttgtacggcaggactcaccacagcgcctcacaggtcatcaagagtatccctcctggg
gtggtcaagatcgtcttactaaggaatgaagaggctactgagtccctgtccatgtctcct
atcaggttcctcactacatcatctggagagttctacggttccccctctgaccctgggcag
gacgccgtcgagcgccgcgtcagctctttcctttctccggacttttccatcagcctcctg
ggacaggatgagaattctcacccaggcagtcctgtgcctcccagtatggagcctaccatg
gtgagtaccttacaccatagtccatggattccatgttcaaaaactcctacaggcctgggt
tttgctataggcgagggtcgggacatcagtacaggagacccgggcatctttgtcaagaac
atcacggacgggggcgcagcacatgaggatggtcgtctgcagatgggagaccagatcctg
ggggtggatgacgagtcactggtggggctgtcatacgatcaggctgttggtatcctgaag
aagacccagggcacggttcgcctgacggtgtgctcggacaaccggcgctacatccccacg
gaccagccttcgttcatccaacccacacaggtcaaccatgcaccggtcactcagactgga
ctcgaccaggctcctatcgtggacgagatcacaggtttgtttgtcaaccacgcaccggtc
acacagactgggctggaccaggctcccatcgtggacgagatcacaggtcaaccacgcacc
ggccactcagactggactggaccaggctcccattctggacgagatcacaggtcaaccacg
caccggccactcagactggactggaccaggctcccattctggacgagatcacaggtctac
cacgcaccggtcacacagactgggctggaccaggctcccatcgtggacgagatcacagtg
tcgggagtaccctatgaaaaagttgaagaagacgttgaccagcttgaggagtcctcccca
ccccaggagcacccagatcacatggacccgcgcacctgtcccatcattcccggccgcatc
actgtcattgacatagagaaggggaagactggactgggactcagcatcgtgggggggtcg
gacacgctactgggtgccattataatccatgaggtttatgaggagggagcagcggcgaag
gacagcagactgtgggcaggggaccagatactggaggtgaatggagaagacttaaggaat
gccacccacgaccacgccatcaacgttctgcgccagacaccctcgcgcgtgagactgatc
gtgtttcgggatgagaaccagtataaagaggaggacctgtatgacgtgttctctgtcgaa
ctggagaaacgcatcggcaaggggctcggcctcagcattgtgggaaggaggaatgatgtc
ggcgtgttcatctcggatgtagtgaagggcggagtggcggaacaggatggccgcctgatg
cagggggaccagatcctgagtgtgaacggggaggacatgaggagcgccacacaggacaac
gctgctgctgtgctcaagactgcccaaggaacggtagtcctgaccatagggcggctgaag
gctagctcccaggcttcccgaaggacctccatggccagctccagtagccacacattagac
aaggctggatccacaggcagcatggacagggctggcatcatcacagggccacgcagggtg
gctgcggctgcggactctgccgacttccccacggagggggtgcgtatggtggagatgtac
aaggggccgcaggactccctgggggtgagcatcgctgggggggtggggagccccctgggg
gacgtccccatcttcatcgccatggtgcaggccaatggggtggcagcgcagacacagaaa
ctcagggttggtgaccgcatcctgagcattaatggacaggccctggagggggtgactcac
gcacaggcagtcaacatgcttatgcagaccacagggagggtcgtgctggaggtttcccag
ggtgatgagttggcaaacatggcgggaggagatgctgctccgagtgttgctagtgtcatg
gcaaccagtgccgagtcatcctcaccgctcaacttcaacgatgacctgggaggtccaacc
cagtacaagaccatagagttggagcgcggtcctgacggactgggcttcagcatcgtgggg
gggcacggcagtccgcacggagacctcccgatctacgtcaagaccgtgttcgccaaggga
gcggcggcggaagacgggcgtctcaaacgaggcgaccagatcgtggctgtaaataacgag
ccgctggaaggagttacccacgaggaagctgtgtccatcttaaagaagtccaagggcaag
attgtcttgactgttctgacttaa
DBGET
integrated database retrieval system
