Branchiostoma floridae (Florida lancelet): 118431776
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Entry
118431776 CDS
T01074
Name
(RefSeq) transcription activator BRG1-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118431776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfo03021
]
118431776
03036 Chromosome and associated proteins [BR:
bfo03036
]
118431776
Transcription machinery [BR:
bfo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118431776
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
118431776
Chromatin remodeling factors
BAF complex
118431776
PBAF complex
118431776
GBAF(ncBAF) complex
118431776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
BRK
HSA
ResIII
QLQ
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
118431776
NCBI-ProteinID:
XP_035698994
UniProt:
A0A9J7ME41
LinkDB
All DBs
Position
15:6008692..6036095
Genome browser
AA seq
1568 aa
AA seq
DB search
MAMPGPDDPMGTPPPQGPTTPQQQSLPPPPTPPQGPGPQQGQPGGYTPGGYTPENISLLH
KALDSMQEKGMTDDPRYAQLMAMAKRAQQGGGPPPPNMGPPPSGPGMDGPDHPGGYGPNQ
IEPPPSSGEGPPHPPSSQGVPPGPPRPSPFNSSQIQQLRAQIMAYKLLARNQSLPESLSL
AVQGKRYPMPGQFQRPQGMGSPNPMQGGMPPSGGPMQGGAPVPPPGGAVPNVGPWGPKGP
MTPQQQPMKMQPPPQQRQPVPGQGGAPQQPSPGSQASHVPTVMQLPPRQSRLAPMGKPQG
VDPVEILNEREHRIQQRISHRIQDLSNLPGNMSEDLQLQATIELKALRLLNFQKQLRTDV
VSCMRRDTTLETALNSKAYKRSKRQGLREARITEKLEKQQKMEQERKRRQKHQEYLNSVM
QHVKDFKEYHRTVSTKTSKLSKAIMTYHSNTEREQKKEQERIEKERMRRLMMEDEEGYRK
LIDKKKDKRLAYLLAQTDEYIKNLTQLVRQHKEELAKKKREKSKKKKKKEKKEGAEGEGD
VDESSQFSDLTINVIETATGRVLSGAEAPKASQLEAWLEMNPGYEVAPREDSDSSEDDDS
GDEKDDENEDSQSSSKDASEKDRNTDGLDEEDKNKDIITSFAQATLEVDDEYSKGDTEMD
YQTYYSMAHAQRENVREQPSLLVNGKLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTI
QTIALITYLMEKKRVNGPFLIIVPLSTLSNWMLEMDRWAPAIVKIAYKGSPQMRRQLMSQ
LRGGKFNVLLTTYEYIMKDKNILAKIRWKYMIIDEGHRMKNHHCKLTQILNTHYMAPHRL
MLTGTPLQNKLPELWALLNFLLPSIFKCCATFEQWFNAPFAATGDKVELNEEETILIIRR
LHKVLRPFLLRRLKKEVESQLPEKVEYVVKCEMSALQRLLYSHMQSKGVLLTDGSEKDKK
GRGGTKTLMNTIMQLRKICNHPFMFQHIEEAYAEHIGSSSSIIQGPDLYRSGGKFELLDR
ILPKLHATNHRVLLFCQMTSLMTILEDYMNYKGLRYLRLDGTTKSEDRSQLLHLFNEKDS
PYFLFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQKSEVRVLRLMTI
NSVEEKILAAARFKLNVDEKVIQAGMFDQKSTSSERRQFLQAILEHDNLGEDDEDEVPDD
ETINQMIARVEEEYELFQRMDLDRRRNEARDPNRKPRLMEEDELPAWLVKDEAEVERLTY
EEEEEKIFGRGSRTRKEVDYSDALTEREWLRAIEEGNLDEMEERKKHKKTRKRKVRVEEI
EEEGEKKKKKRGRPPAEKLTPNPPKLTKQMMKLYDTVMYHGDSAGRQLSEPFFRLPSRRD
LSDYYEMIKKPIDLKKIRDRIKNHKYRCLDDLEKDIIQMCKNAQLYNVEGSQIYEDSIVL
QSVFTNARELLEQSGDLPSPGQPDGEDSEEEEEEEGSESESRSSLKMKIRVGKGEGRGKS
KGKSPRRKPGRPKKAVVSDDDDSDTNEQQQAPSEEEQTEGEEDEGQSPSSSHASSRVSSP
APGHSRKR
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atggctatgccggggcctgatgaccccatgggcaccccaccccctcaaggtcccacaact
ccgcaacaacagagcctaccccctccaccgaccccccctcaggggccaggacctcagcag
ggccagccaggggggtacaccccaggagggtacaccccagaaaacatcagtctactgcat
aaggcattagactccatgcaggagaaagggatgacagatgaccctcgctatgcccagctc
atggccatggccaaacgtgcccaacaggggggtggaccccctccacccaacatgggcccc
cctccatccggaccaggtatggacggcccagatcatccaggggggtatggccccaatcag
attgaaccccctccgtcatcaggagaagggccaccacatcccccctccagccagggggta
ccccctgggcccccgcgtccctcccccttcaactcgtcccagatccagcagctgcgggca
cagatcatggcgtacaagctgctggctcgtaaccagtcgctgccagagtccctgagtctc
gccgtgcaggggaagcggtatcccatgccggggcagttccagaggccacaaggaatgggc
agtcccaaccccatgcaggggggtatgcccccctcgggtgggcctatgcaggggggagcg
cccgtcccccctccaggtggtgctgttccaaatgtgggtccctgggggccgaaggggccg
atgaccccacagcagcagccaatgaaaatgcaacctccccctcagcagcgacagccggtg
cctggtcagggcggcgccccccagcagccgtcgccgggatcgcaggcatcgcacgtgccc
acagtcatgcagctgccgccgcgccagtcccgcctggcacccatggggaaacctcagggc
gttgaccccgtggagattctgaatgaacgagagcacaggatccagcagcgtatttcccac
cgtatccaggacctgtccaacctgccagggaacatgtccgaggacttacagctgcaggct
accatcgaactcaaggcactgcggctgctcaacttccagaaacagttgcgtactgacgtt
gtgagctgcatgcgacgcgacaccacgctggaaacggcactgaactccaaggcttacaag
cgcagcaagcgacagggcctgcgggaggcccgtatcacggaaaaactggagaaacaacag
aagatggaacaggaaagaaaacggcggcagaaacaccaggaatacctgaactctgtaatg
cagcacgtgaaggactttaaggagtaccaccgcaccgtgtccaccaagacgtccaaactg
tccaaggccatcatgacctaccactccaacaccgagcgcgaacagaagaaagaacaggaa
cgcatcgagaaggagcgtatgcgccgcctcatgatggaagatgaagaggggtaccgtaag
ttgattgacaagaagaaggacaagcgtctagcgtacctgctggcccagacagacgagtac
atcaagaacctgacccagctggtccggcagcacaaggaggagctggccaagaagaaacgg
gagaagagcaagaagaagaagaagaaggaaaagaaggaaggtgctgagggggagggggat
gtagacgagagcagccagttcagcgacctgaccatcaacgtgatcgagacagcgaccggg
cgcgtcctcagtggggccgaggctcccaaagccagtcagctggaggcatggctagaaatg
aaccctgggtatgaagtcgcaccccgcgaggatagtgatagctctgaagatgacgacagt
ggggatgaaaaggacgacgagaacgaagactcgcagtcttccagcaaggatgcgagcgag
aaggaccgtaacacagacggattggatgaggaagacaagaacaaggatattatcacgagc
tttgcacaagctaccctggaagtagacgacgagtacagtaagggagacacagagatggac
taccagacgtactactccatggcacacgcacagagggaaaacgttcgcgagcagcccagc
ctcctcgtcaatggaaaactcaaggagtatcagattaagggcctggagtggctggtgtcc
ctgtataacaacaacctaaacggtatcctggccgatgagatgggcctgggaaagaccatc
cagaccatcgcgctcatcacgtacctcatggagaagaaacgcgtcaacggccccttcctc
atcatcgttccgctctccactctgtccaactggatgctggagatggaccgctgggccccg
gcgatcgtgaagattgcgtacaaaggctcgccccagatgcggcgccagctgatgtcccag
ctgcgaggcggaaagttcaacgtcctcctgacgacctacgagtacatcatgaaggacaag
aacatccttgcaaagatccgttggaagtacatgatcatagacgagggtcatcggatgaaa
aaccaccactgcaagctgacacaaatcctcaacacccactacatggctccccaccgtctc
atgttgacagggacccccctgcagaacaagttgccggagctgtgggccctgttgaacttc
ctcctcccttccatcttcaagtgttgtgccacctttgaacagtggttcaatgcaccattc
gctgccaccggtgacaaggttgagctgaacgaggaggagacaatcctgattatccgccgt
ctccacaaggtgcttcggccgttccttctgagacgtctcaaaaaggaggtagagtctcag
ctacctgagaaggttgagtatgtggtgaagtgcgagatgtcggcgctccagcgtctgctg
tacagccacatgcagtccaagggcgtgctgctgaccgacgggtccgagaaggacaagaag
gggcgcggcggaaccaagactctcatgaacaccatcatgcagctccgcaagatctgcaac
catcccttcatgttccaacatatagaggaagcgtatgcagagcacattggatcatcctca
agcatcatccaaggcccggacctgtatcgttctggagggaagttcgagctgttggaccgc
atcctgccgaagcttcacgcgacgaaccaccgcgtcctcctgttctgtcagatgacctct
ctcatgaccatcctggaggattacatgaactacaagggtttgcgttacctgcgtctggac
ggcaccaccaagtcggaggaccggtcccagctgctgcacctcttcaacgagaaggattct
ccctacttcctcttcctgctgtccacgcgcgctggcggcctcggtctgaacctgcaggcc
gccgacaccgtcgtcatcttcgacagcgactggaacccacatcaggatctccaggctcaa
gatcgcgcccaccgtatcggacagaagtcagaggtgcgtgtgctgagactcatgaccatc
aactccgtcgaggagaagattctcgcggcagctcgcttcaagctgaacgtggacgagaag
gtgatacaggcgggcatgttcgaccagaagtcgaccagctcggagcggcgccagttcctc
caggccatcctggagcacgataacctgggagaggacgacgaggacgaggtaccggatgat
gagaccatcaaccagatgatcgcacgcgtggaggaggagtatgagctgttccagcgcatg
gatctggaccggcgcaggaacgaggcgcgggacccgaaccgtaagcctcggctgatggag
gaggacgagctgcccgcctggctggtgaaggacgaggccgaggtggagaggctcacctac
gaggaggaggaggagaagatcttcggcagaggctcgcgtacgcgtaaggaggtggactac
agcgatgcactcacggagagggagtggctcagggctattgaggaaggcaacctggacgaa
atggaggaacgaaagaagcacaagaaaacacgtaagaggaaggtccgtgtggaggagatc
gaagaagagggggagaagaagaagaagaagcgagggcggccgccagcggagaaactgact
ccgaaccccccaaaactgaccaaacagatgatgaagctgtacgacacggtcatgtaccat
ggggacagcgccggccgccagctcagcgaaccgttcttccgcctgccgtcacgtcgcgac
ctgtcggactactacgagatgatcaagaaacccattgacctcaagaagatcagggaccgt
atcaagaaccacaagtaccgctgcctggatgatctggagaaggacatcatccagatgtgt
aagaacgcacagctgtataacgtagagggatcacagatctatgaagactccatcgtgctc
cagtcggtgttcaccaatgcccgtgagctgctggagcagtcaggtgacctgccgtcgccc
gggcaacctgatggggaggacagtgaggaggaagaggaggaggaggggtcggagtcggaa
tctcgctcatcactcaagatgaagatccgagtagggaagggagaaggcagaggaaagtcc
aagggtaagagcccacgcaggaagccggggcgaccaaagaaagccgtcgttagcgacgat
gatgactcagacaccaacgagcaacagcaggctcccagcgaggaggagcagacagagggt
gaggaagatgagggacagtcaccaagctcatctcacgcctcgtctcgcgtatcgtctcct
gctcccgggcacagcagaaagcgatga
DBGET
integrated database retrieval system
