Branchiostoma floridae (Florida lancelet): 118431801
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Entry
118431801 CDS
T01074
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04137
Mitophagy - animal
bfo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118431801
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118431801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfo03019
]
118431801
03009 Ribosome biogenesis [BR:
bfo03009
]
118431801
04131 Membrane trafficking [BR:
bfo04131
]
118431801
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfo04147
]
118431801
Messenger RNA biogenesis [BR:
bfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
118431801
Ribosome biogenesis [BR:
bfo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
118431801
Membrane trafficking [BR:
bfo04131
]
SNARE
SNARE associated proteins
Others
118431801
Autophagy
Aggrephagy
Other aggrephagy associated proteins
118431801
Exosome [BR:
bfo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118431801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_2
AAA_33
AAA_22
AAA_14
TIP49
RNA_helicase
nSTAND3
AAA_17
NPHP3_N
AAA_28
Mg_chelatase
ATPase_2
IstB_IS21
AAA_18
Parvo_NS1
ABC_tran
Vps4_C
ATPase
AAA_7
NB-ARC
AAA_24
Bac_DnaA
AAA_lid_PRS2_C
NACHT
TsaE
DUF815
AAA_3
ResIII
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
118431801
NCBI-ProteinID:
XP_035699050
UniProt:
A0A9J7NC54
LinkDB
All DBs
Position
15:18634831..18653919
Genome browser
AA seq
803 aa
AA seq
DB search
MAQPTQSQDELSTAILKQKSKPNRLLVEEAVNEDNSVVSLSQEKMDELQLFRGDTVLMKG
KKRRETVCIVLSDDTCPKEKIRINRVVRNNLRVRLGDVVSVQACPDVKYGKRIHVLPIDD
SVEGITGNLFEVYLKPYFLEAYRPVHKGDTFLVRAAMRPVDFKVVETDPSNYCIVAPDTV
IHCEGEPIKREDEEEALNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGI
LLYGPPGVGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII
FIDEIDAIAPKRDKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSIDAALRRFG
RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVASETHGHVGSDLAALCSEAALQ
QIREKMDLIDLEDENIDAEVLDSLAVTMENFRYALGQSNPSALRETVVEVPNTTWEDVGG
LDNVKKELQELVQYPVEHPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANFIS
IKGPELLTMWFGESEANVRDVFDKARQAAPCVLFFDELDSIAKSRGGNVGDGGGAADRVI
NQVLTEMDGMTDKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEPSRISILKANL
RKSPVAKDVDLGYLAKVTHGFSGADLTEICQRACKLAIREAIEEEIRNEKARKDNPDLDM
EDDYDPVPEIRRDHFEESMKFARRSVSDNDIRKYEMFAQTLQQSRGFGGNFRFPGQAGPS
GGQGSGGTGGDNLYEEGDDDLYS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaccaacacagagtcaagatgagctgtccacagccatcctgaaacagaagtcc
aagcccaaccgtctgctggtggaggaggcagtcaatgaagacaacagtgtcgtctctctc
tcacaggaaaagatggacgagctgcagctgttccgcggggacactgtcctgatgaagggg
aagaagcggcgcgagacggtctgcatcgtgctctccgatgacacctgccccaaggagaag
atccgcatcaaccgcgtggtgcgcaacaacctgcgcgtgcgtctgggcgacgtggtcagc
gtccaggcatgcccagatgtgaagtacgggaagaggatccatgtgctgcccatagatgac
tccgtggagggcatcacggggaacctgtttgaagtgtacctgaagccgtacttcctggag
gcttacagacccgtgcacaaaggcgatacattcctggtgcgtgccgctatgcgtcctgtg
gactttaaggtggtggagacagacccgtccaactactgcatcgtggctccagacaccgtc
atccactgtgagggagagcccattaagagagaggatgaggaagaggcgctgaatgaggtt
gggtatgatgacatcggcggtgtccgcaagcagctggctcagattaaggagatggtggaa
ctcccactgagacaccccgctctcttcaaggctatcggggtcaagcctccccgtggtatc
ctcctgtatggaccccctggtgtggggaagaccctgatcgccagagctgtggccaacgag
actggagcttttttcttcctcatcaatggtccagagatcatgagcaagctggctggagag
tccgagagcaacctgcgtaaggccttcgaggaggcggagaagaacgctccggccatcatc
ttcatcgatgagattgatgccatcgctcctaagagagacaagacccacggcgaggtggag
cggcgtatcgtgtcccagctgttgaccctgatggacggactgaagcagcgcgctcacgtg
gtcgtcatggcagccaccaacagacccaactccatcgacgctgcgctcaggcgcttcggc
cgttttgaccgtgaggttgacatcgggatccccgacgcgaccggccgtctggagatcctg
cagatccacaccaagaacatgaagctggccgacgatgtggacctcgaacaggttgcatca
gagacccacggccacgttggctccgatcttgccgccctgtgctcggaggcggccctgcag
cagatccgagagaagatggacctgattgatctggaggatgagaacatcgatgctgaggtc
ctggactctctggctgttaccatggagaacttcaggtatgccctaggccagagtaacccc
agtgccctgcgtgagacggtggttgaggtgcccaacacaacatgggaggatgttggaggt
ctggataatgtcaagaaggagctgcaagagctggtgcagtacccagtggaacaccctgac
aagttcctgaagttcggaatgacgccgtcgcgtggcgtgctgttctacggaccccctggc
tgcggtaagacactcctggccaaggccatcgcaaatgagtgccaggccaactttatctcc
atcaagggccccgagctgctgaccatgtggtttggagagtcagaggccaacgtcagagat
gtgttcgacaaggccagacaggcggccccctgtgtgctgttctttgatgagttggattcc
atcgccaagtctcgaggaggcaacgttggagacggaggtggcgcagctgaccgcgtgatc
aaccaggttctgacggagatggacggcatgacggacaagaagaacgttttcatcatcggc
gcgaccaaccgtccggacatcatcgaccccgccatcctgcgtccgggccgtctcgaccag
ctgatctacatcccactgcccgacgagccctcgcgtatctccatcctgaaggccaacctg
cgcaagtcgcctgttgcaaaggatgttgacctgggttacctggctaaggtgacccacggg
ttcagcggtgctgacctgacagagatctgccagcgggcgtgcaaactggcgatccgagag
gcgatcgaggaggagatcaggaatgagaaggccaggaaggacaaccctgacctggatatg
gaggacgattacgatccggtgccggagatccgcagggaccactttgaggagtcgatgaag
ttcgcccggcgatcggtgtcggataacgacatccggaagtacgagatgttcgcacagacg
ctgcagcagagcagaggcttcggcggaaacttcaggttcccaggccaggccggtccgagc
ggaggccagggcagcggcggaaccggcggcgacaacctgtatgaggagggcgacgacgac
ctgtacagttag
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