Branchiostoma floridae (Florida lancelet): 118431875
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Entry
118431875 CDS
T01074
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfo03036
]
118431875
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
118431875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
Motif
Other DBs
NCBI-GeneID:
118431875
NCBI-ProteinID:
XP_035699180
UniProt:
A0A9J7NDG9
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All DBs
Position
15:117537..203655
Genome browser
AA seq
2464 aa
AA seq
DB search
MNQIPLQNGEIPNIPMNTLAGISSLTELLPELPLPTPHPSTVNNKSLLYSQRVIEEARRL
VANPDENLVPHLVQALGQTSTDHIELKDNSSNAEVEGDLPPLLQAVLACNPNVFNQRTRS
VEPHSSNHGGISPRTPMAPSPYYQQSPDGVVQHSPYQRSHTPMAQQQQGSPSPYSQNSPY
PQGSPAKYGPQPSPYPQGSPSSRYQPQESSGKYAAQGSPARHVSQGSPGKFHPPTFPLGH
QQQNIPQGVPSNTCNGYSANQFSPAPSPAVGSPPSANVMSPPQTTSRVLGQHQPKAIPAL
SPTSHGGGIHAKPASVARPSAAATAEQLQRQQQQPESQQQQQLVELEQENQEPTTVLSTA
QAANYIVQGGDDRPQDPAGQPEEKHRLEKIKLRMVPGGAEPVVVLEPLSPKDKMLLSKSR
PMSSKSVDAQSAAQAFAFDDSTSPDEHSSKETRISLKRKKKSKSHREDRGRFVPEVRYNI
ISSPTKDSPKLTLKLSRTVISPKTGQQLRPSELATHDKEKDLHTTESDKSGKGNVEKAVP
ETLVEKALEDKINEDKASDSTGVEKAATGAAEKLKEAIIIEESKSKEGTSQKSNKKEMDS
LQDFIVSTEPAKVKGRKLDPVEQKKLQENDYSTAEVEVVGISDSPASPKVPMKTAASKTR
CQGEKIEASASEDGTVGTPKPHMTRRSLTTSRRDPVAVVMLERLGPGNDMYSNIKSKRRR
GMQQEEKSEEMLHIVEALVPNQEECAVRSREKSNSSSTAHDQDHQLDMDSGAKSKAKKRK
HSDGQEGVDIMDLENFRDPFEDMYSSIKNKRRRKASANALKAMEIGNKDEDSSGEVVVSR
DREERTAAVMEEVARQRKEKRKRREKREQAKPQLTMEELMESSTFKRFTSLMDSVFESSE
DMDLDVDADDDDDEIPADSLIAKAVLTELCGEAAKLKSMGVMNQVAADRLVRLMNILERN
IRDGAKLQPLLAQEEGGEEEQRLWRELTFERVIRSADSCLTALFITTSAKMPKQVFIEDT
IERLVMYAKFHLQNTIYPEFDPVYRTPDNKDGIVWNSRMKRAHHKGARHKSVVSLYNKLC
EIVSLLAELLEVEMMTDTVILQVSSLATTPFFVENVSELQLSALKLVMAVFSRYDKHRQL
ILEDIFASLAKLPSSKRNLRSYRLNSEDNIQMVTALVLSLIQCVVTLPEPEHVDSTQTNK
DPEKTKEDKKSKESKMDDDVLIASSYETAMRTAQNFLSIFLKKCTSKEEEDYRPLFENFV
QDLLATVNKPEWPAAELLLSLLGRLLVHHFSNRSTEMSLRVSSLDYLGMVAARLRKDAVS
SELDQDTLDAVMDEINSVSESESVPVEKDEPTSPAFPDGDQTQTFQRAMLDYLAENSDTD
PALHFARQFYIAQWYRDSTAQIERSIKGLKSKGAEDDSDNEVEEEDEDEDDGGVKKQNMV
EPVSSVDVMQAADSRKKFLLTMVQASCGPLGTLRTRHSNLSYENACVIARYLASQRPFSQ
SFDIYLQQILRVLSENAIAVRTRAMKCLTAVVAVDPGILARADMQKGVHGRFMDQSTSVR
EAALELVGKFVLLRTELIPQYYDMIIERILDTGISVRKRVIKILRDICLEVPDFTKVTEM
CVKMIRRVNDEEGIKKLVNDVFQQMWFSPVKSSDEESLFRKVINITDVVDACKETGYDWF
EQLLSNLLKAEENASYKPASKACVQITDCLVQNVLSLEEKTAETVENRTSSHRLVSSLQT
LYLFSKVRPELLVDHAMTLQPYLSTQCSTQGDYLVLHNVARILQLVVPLMEHPSEVFLAS
LEEDLMKLIIKHGMMILQACVSCLAAVVNNVTHNIRLVWDCFQKYFGVLGKLKQEYSMDP
ESQALQQNRPTLLRSLFTVGLLCKHFDFDRKMKGHTKVCIKDKVFEVLMYFMDHPDEAVQ
HKALTGIGFLSIQHPDLMMGSQMTKMYHKLLMENSSVKLKCQVLRNLQNYLTEEDAKLRV
ADAEWSKNAKKEDLKEMGDVSSGMGSSIMQIYLKHVMETFFHSETSVRMAALHVIVLVLK
QGLVHPVQCVPYLVAMGTDQEMMVRNKADQQLSEIDHKYSGFIHMKALAGIKMSFKLQQI
AQQNGDCIVRGMREDENRSPTALCSHLYSLVRCNRQHRRALLLSLLKLFDDETCQLDILL
YVADNLACFPYATQDEPLFIIHHVDIILSVTGANVLQSFREALHPTKKATNQSEGADDEP
GSPILPMVDDDDLEEDQLLAQFPSDPKALLDCCIQAHGCILLLMLKQYLKDLYGFTDSKC
HRYSPTEAAKVYDKSLNRRSLAKFSPQSVLDYMCADTPDFAEDEGARRHLIEHYLDFKQL
MLRLDPAEDDDEMPERESTTLSRTKITPTKEGNSINDKGTEAEDNQGQETEVEGKEGSGT
KAEGQQVSEKSSAVLKSRRGRPPKEKTTPKPAKRRQRRKRRRVVTMDSDDDDEEGDSSDP
DFML
NT seq
7395 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagattccccttcagaatggggaaatccccaacatacctatgaatacgctggca
ggcatttccagcctcactgaactgttgccggagctacctctgccaactcctcatccatcc
actgtgaacaacaaaagcctgttgtacagccaacgagtgatagaagaagcccgtagactg
gttgccaacccagatgaaaatcttgttcctcaccttgtccaagctttaggacagacctcc
acggaccacatagagctgaaagacaactccagcaatgctgaagtagagggtgatctgcca
ccactcctgcaggctgtcttggcatgcaacccaaatgtgttcaaccagaggacgaggagt
gtagagccccactcttcaaatcatggaggaatttctcctcgaacaccaatggctccatct
ccgtattatcagcagtcacctgatggtgtggtgcaacattcaccctatcagcggtcccac
acgcccatggcacagcagcagcaaggcagcccgtctccctacagccaaaatagtccatat
ccgcagggcagccctgccaaatatggccctcagcccagtccatacccacagggaagtccc
tcttcaaggtaccagccacaggaaagttctggaaaatatgctgcccaagggagtccagcc
agacatgtgtcacagggtagcccagggaagttccacccgcccacattccccctgggtcac
caacagcagaacattccacaaggtgtaccatccaatacctgcaatggatactctgccaat
cagttctcccctgcaccctcacctgctgtgggtagcccaccaagtgccaacgtcatgtca
ccgcctcagactaccagcagagttttgggtcaacaccagcctaaagccattccagctctg
tcacccactagccacggtgggggaatacatgctaaaccagcttctgtggccagaccgtct
gcagcagccactgcagaacaattgcagcgacagcaacagcagccggagtcacagcaacag
cagcagcttgtggagctggaacaggagaaccaggaacctacaacagtgctcagcacagct
caagctgccaactacattgtgcagggaggtgatgacaggcctcaggaccctgcaggacag
ccagaggagaagcataggctggagaaaatcaagctgaggatggtgcctggtggtgcagaa
cctgttgttgttctagaaccactctctcctaaagacaaaatgcttctcagtaagagcagg
cctatgtcatctaaatcggttgatgcacaaagtgctgcacaagcctttgcttttgatgac
agcacttcaccagatgagcattcatcaaaagagacaagaatctctctcaagaggaagaaa
aagtccaagtctcaccgggaagacagaggtcgttttgtaccagaggtgcgctacaatatc
atcagttcacctactaaggactctccaaaacttactttgaagctctccaggacagtcatc
tcgcctaagactgggcagcagctgaggcccagtgaactggcaacacatgacaaggagaaa
gatctgcataccacagagtcagacaagtctgggaagggaaatgtagaaaaggcagtacca
gagactttagtggaaaaagcccttgaagataaaatcaatgaagacaaagcatcagatagt
accggtgttgaaaaggcagctacaggggctgctgagaagttgaaggaagctatcataatt
gaagaaagtaaaagcaaagaaggtaccagtcaaaagtcaaacaagaaagagatggacagt
cttcaagacttcattgtgagcacagaaccagcaaaggttaaagggaggaagttagacccc
gtggaacagaagaaattacaagagaatgactactctacagcggaagtagaagtagtagga
atttctgatagtccagccagccccaaagtccccatgaaaaccgcagcatcaaaaaccaga
tgtcagggagaaaagattgaagcatctgcatctgaggatggcacagtgggtacaccaaag
cctcacatgacaagaaggtcattgaccactagtagaagagacccagttgctgtagtaatg
cttgagaggcttggtcctggaaatgatatgtacagcaacatcaagagcaaacgaaggcgt
gggatgcagcaagaggagaagtcagaggaaatgctgcatattgttgaagctcttgtacct
aaccaagaggaatgtgctgtcagaagcagggagaagtccaatagttcttcgactgcacat
gaccaggatcaccaattggacatggattctggggcaaaatcaaaggctaagaaacggaaa
cactctgatggtcaagaaggagtggacataatggaccttgagaacttccgtgatcccttt
gaagacatgtacagcagcattaagaacaaacgacggagaaaggcatctgccaatgcactg
aaggccatggagattgggaataaggatgaggatagcagtggggaagttgttgttagcaga
gacagagaggagagaacagctgctgtcatggaagaagttgcccgtcaaagaaaggagaag
agaaagagaagagaaaaacgggagcaggccaaacctcagctgacaatggaggagttgatg
gaatcatccacatttaagaggttcacatctttaatggattcagtctttgaatcctctgag
gatatggaccttgacgtagatgctgatgacgacgatgatgaaattccagctgacagtctg
attgccaaggctgtcctaactgagctatgtggagaagctgccaagctaaagtcgatgggg
gtcatgaaccaagtggcagcagatcgcctggtgaggctgatgaacatcctggagagaaac
atccgcgatggagctaaattacagccactacttgcacaggaggaaggtggcgaagaggag
cagcgcctgtggagagaactaacctttgaacgtgtcataaggtctgctgactcgtgcctc
actgctctgttcatcaccacatcagcaaaaatgccaaagcaggtatttatcgaagatact
atagagcggcttgtcatgtatgcgaagttccacctgcagaataccatctaccctgagttt
gatcctgtctacaggacaccagacaacaaagacggaatagtttggaacagtcggatgaag
cgtgctcaccacaagggtgcccgccataaatcagttgtgtcactgtacaacaagttgtgt
gaaattgtatcattgctggctgagctgttagaggtggagatgatgacggataccgttatt
ttgcaggtttccagtttagcaacaactccattctttgttgagaatgtcagcgagttacag
cttagtgcactgaaactggtcatggctgtgttttcccgctatgacaagcaccgccagctc
atactggaagacatatttgcctcccttgcaaaattgccatcaagcaaaaggaaccttcgc
agttacagattaaactcagaagacaacatccagatggtgacagccttagtgctgtctttg
atccagtgtgtggtgacattgccagagccagagcacgtagactcaacgcagaccaacaag
gatccagagaagacaaaagaggacaagaaatcaaaagagtccaaaatggatgatgatgtc
ttgattgcatcatcatatgagactgcaatgagaactgcacaaaattttctctctattttt
ctcaaaaagtgcaccagtaaagaggaggaagactaccggcctctgttcgaaaactttgtt
caagaccttctagccacagtcaacaagccggagtggccagctgcagaactgttgctcagc
cttttgggaaggctactagttcatcacttcagcaaccgttctacagaaatgtctttgcgt
gtgtcatctttggactacctgggaatggtagctgcacgtttgaggaaggatgctgtatcc
agtgagctggaccaagacactttagatgccgtcatggatgagataaactctgtatctgaa
agtgagtcggtaccagttgaaaaagatgagccaacaagtcctgcttttccagatggtgac
caaacacaaacattccagagagccatgttagactacttggcagagaattcagacacagat
ccagctcttcattttgcacgccagttctacattgcacaatggtacagggactccactgcc
cagattgagagatcaattaaagggctcaagtccaaaggggcagaagatgactctgataat
gaggtggaggaagaggacgaagatgaagatgatggtggtgtcaaaaagcaaaatatggtt
gagccagtgtcatcagttgatgtaatgcaggctgcagattcgaggaaaaagtttctcttg
acaatggttcaggccagctgtggaccacttggaactctacggacaaggcatagcaacttg
agctacgagaatgcatgtgtgattgctcgttacctggcatcacagagacctttctcgcaa
agctttgacatctacttgcagcagattctgcgagtgctaagtgagaatgcaattgcagtt
cggactcgtgctatgaagtgcttgactgcagttgtagcagtggatcctggtatactagct
cgggctgacatgcagaaaggtgtgcatgggagattcatggaccagtctacttctgtgcgg
gaggcagctttggagcttgttggcaagtttgtattgctgaggacagaacttattccccaa
tactatgatatgatcatcgagagaatactggatacaggtatcagtgttcgcaaaagagtc
atcaagatcctgagggatatctgtctggaagttcctgatttcaccaaggtcacagagatg
tgtgtgaagatgatacgcagagtgaatgatgaagagggtatcaagaaactggtgaatgat
gtctttcagcaaatgtggttctcacctgtgaagtcatctgatgaggagagcctttttcgg
aaggttatcaacattactgatgtggttgatgcctgtaaagaaacgggatatgactggttt
gaacagttgctgtctaatctgttaaaagcagaagagaatgcctcctacaagcctgccagc
aaagcctgtgttcagatcactgactgtttggtgcagaatgtgcttagtttggaggaaaag
actgcagagacagtagagaacaggacaagcagccatcgtcttgtatcatccctgcagact
ctgtacctgttcagtaaagttcggcctgagttgcttgttgatcatgccatgactcttcag
ccatacctgtccacgcagtgtagtactcagggagactacctagtgctccataatgtagcc
agaattctgcagcttgtggttccactgatggagcaccccagtgaagtcttcttggcctcc
ctggaagaggatcttatgaagcttatcataaaacatggcatgatgattctccaggcatgt
gtaagttgccttgcagctgttgtcaacaatgtaacccataacatcaggctggtctgggac
tgcttccagaagtattttggggtattgggtaagttgaagcaggagtacagtatggaccct
gagagccaggcattgcagcagaaccgccctacactgctgagatcactcttcactgttgga
ctgctctgtaaacattttgactttgatcgcaagatgaagggacacacaaaggtctgtatc
aaggacaaagtgtttgaggtgctgatgtacttcatggaccatcctgatgaggcagtgcag
cacaaggctctgacaggaataggcttcctttccattcagcatccagacctgatgatgggt
agtcagatgaccaagatgtatcataagcttcttatggaaaactcatccgttaaactcaag
tgtcaggttctcaggaatctacagaactacttaacagaagaggatgcaaagcttagagtg
gcagatgctgaatggagcaagaatgctaaaaaagaggatctgaaagaaatgggagacgtc
tcttcaggcatgggtagcagcatcatgcagatctacctgaagcatgtcatggagacattt
ttccattcagagacttcagtgcgcatggctgccctccatgtcattgttcttgtgctgaaa
caaggcttagtacatcctgtccagtgtgttccttatctggttgcgatgggaacagatcag
gaaatgatggtgaggaacaaagctgaccaacagctcagtgagattgaccacaagtactct
ggcttcattcatatgaaggcactggcaggaataaagatgtccttcaaattgcagcagata
gcacagcagaatggagattgtatagtacgaggaatgcgagaagatgagaaccgatctcca
acagccctttgctcacatctgtactccctggtccgatgcaaccgacaacaccggagggcc
ctccttttatccctactcaagctctttgatgatgagacatgccagctggacatactgctg
tatgtggcagacaacctagcctgcttcccttatgccactcaagatgagcctttgtttatc
atacaccatgttgacatcattttgtcagtcacaggagctaatgttcttcaatcttttcgt
gaggctctacatcccactaaaaaggcaacaaatcaaagtgaaggtgctgatgatgagcca
gggtctcctatcctgccaatggtggatgatgatgacttggaggaagaccagctactagcc
cagtttccatcagaccctaaagccttgctggactgctgcatccaagctcatggatgcatt
ctccttttgatgcttaagcagtacctgaaagacttgtatggctttacagacagcaagtgt
caccgatattctcccacggaggcggccaaggtctatgacaagtccttgaaccgtaggtca
cttgccaagttcagccctcaatcagttctggactacatgtgtgcagatacacctgacttt
gctgaggatgagggagccagacggcacctgattgaacactacttggattttaaacaactg
atgttgcgcctagacccagcagaggatgacgatgagatgccagagagagagtcaaccaca
ttgtcccgaaccaagataacacctacaaaagaaggcaactcaatcaatgacaaaggaact
gaggcagaggataaccagggtcaggagacagaggtggaggggaaggagggttcaggcact
aaagctgagggacagcaggtgagtgaaaagtcttcagcagtcctgaaatcaagacgagga
agaccacccaaagaaaagacaacccccaaacctgcaaagaggcggcagagaagaaagagg
agaagagtggtgactatggacagtgatgatgatgatgaagagggtgattccagtgatcct
gactttatgctttga
DBGET
integrated database retrieval system
