Branchiostoma floridae (Florida lancelet): 118431893
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Entry
118431893 CDS
T01074
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Pathway
bfo04145
Phagosome
bfo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118431893
09142 Cell motility
04814 Motor proteins
118431893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bfo03036
]
118431893
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bfo04812
]
118431893
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
118431893
Cytoskeleton proteins [BR:
bfo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
118431893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WDR55
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT140_1st
Dynein_IC2
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_DCAF4
Fucose_iso_N2
Motif
Other DBs
NCBI-GeneID:
118431893
NCBI-ProteinID:
XP_035699210
UniProt:
C3YA29
LinkDB
All DBs
Position
15:12425903..12436748
Genome browser
AA seq
616 aa
AA seq
DB search
MADRKAELERKKARLAQIREEKKRKEEERKRREAEEAAKASKKGPDPSEIERKRIETEQL
LKDIGIEEQKRAQAAVPSMVAAEPPGVTQKKAPPSADDRPLPTLARKSLKLSLTDTSVIN
IPPREKVAYSKETQTIVEVQEKEESEEEIEPPPEVVEPPPDKKEEEEKEEEAQRPRELTE
EEKQQIVLSDDFQTFINNTSRVMERALAEDMDIFYDYGGQDLEEREGPEAGAKMSLQRQF
NDERWSRYRTVTHLDWSAQYPELLVASYNNNEESPNEPDGVCLVWNMKFKKTTPEYIFHC
QSAVMAATYAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVDVIG
TQNAHNLITVSTDGKMCSWSLDMLSNPQESMELQHKQSKAVAVTCMSFPPNDVNNFVVGS
EEMAVYTGCRHGSKAGINEIFEGHQGPVTSIDCHPATGQVDFSHLFLTSSFDWTVKLWSV
KHQRPLYSFEDNSDYVYDARWSPIHPAVFATGDGMGRLDVWNLNNDSEVPTASVTLDMQP
AINRVRWHSSGHQVACGDADGKVWIYDIGEQIAVPRTDEWQKFVRTLSDMRANMVDSQDE
GGLSSGRTSMSSSPLR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccgcaaggccgaactggagcggaaaaaggcgcgtcttgcgcagatccgtgag
gagaagaagcggaaggaggaagagcgaaaacgacgagaggcagaagaagctgctaaggca
agtaagaaaggaccagatccttcagaaattgaacggaagcggattgaaacagagcaacta
ttgaaggacatcggtatagaagaacaaaagcgagctcaagctgctgttccctcaatggtt
gcagctgagcccccgggtgtcacacagaaaaaggcacccccaagtgctgatgatcgacca
ctaccaacactggcaagaaaatcgctgaagctgagcctgactgacacctcggtgatcaac
atcccgccacgggagaaggttgcctacagcaaagagacacagaccatcgtggaagtgcag
gaaaaagaagaatctgaagaggagatagagccacccccagaggtagtggaacctccccct
gacaagaaggaagaagaggagaaagaggaagaagcccagagaccgcgagagttgacagaa
gaggagaaacagcagatcgtcctgtctgatgacttccaaaccttcatcaacaacacctcc
cgcgtcatggaacgtgcgctggccgaggacatggacatcttctacgactacggtggccag
gatttagaggaaagggagggtcctgaagcaggtgcaaagatgtccctccagcgacagttt
aacgatgagcgctggtcccgctaccgtaccgtgacacatctggactggtcggctcagtac
cctgagttactggtggcctcctataacaacaatgaagagtcacccaacgagcctgacgga
gtctgtctagtctggaacatgaagttcaaaaagactaccccagagtacatcttccactgt
cagtctgcagtgatggccgctacctacgccaagtttcaccctaatctcgtggtcggcggg
acgtactcggggcagatcgtgctgtgggacaaccgcagtaacaagcgcactccggtacag
cggactcctctgagtgctgcagcccacactcacccggtatactgcgtagacgtgataggg
acacagaacgctcacaacctgatcaccgtgtccacggatgggaagatgtgctcctggagc
ctggacatgctgtccaacccgcaggagagtatggagctccagcacaagcagtccaaagct
gtggccgtcacctgcatgtccttcccacccaacgatgtcaacaactttgtggtgggcagt
gaggagatggctgtgtacacgggctgcagacatggaagtaaagcaggtattaacgagatc
ttcgaaggccatcagggtccagtgaccagtatcgactgccaccctgccactggtcaggtg
gacttctctcacctcttcctcacctcgtctttcgactggacggtcaaactgtggagcgtc
aagcatcagcgaccactgtactcgtttgaagacaacagtgactatgtgtatgatgcccgc
tggtcacccatccatcctgccgtgttcgctacaggtgacggcatggggagactggacgtc
tggaacctcaacaatgactcagaggtccccacagccagtgtgacccttgacatgcagccc
gccattaatcgtgttcgctggcactcgtccggacaccaggtggcctgcggcgacgctgac
ggaaaagtctggatatacgacattggcgagcaaattgcggtaccgcggacagacgaatgg
cagaagtttgtacgaacactaagcgacatgcgagccaacatggtggacagtcaggacgag
ggcggcctctcctccggtcgcacaagcatgtcctcgtcacctctacgataa
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