Branchiostoma floridae (Florida lancelet): 118431971
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Entry
118431971 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23-like
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118431971
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
bfo04031
]
118431971
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118431971
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118431971
GTP-binding proteins [BR:
bfo04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
118431971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
SRPRB
Ras
G-alpha
zf-B_box
zf-RING_UBOX
zf-RING_5
Gtr1_RagA
ANCHR-like_BBOX
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Interferon
Fuz_longin_3
Motif
Other DBs
NCBI-GeneID:
118431971
NCBI-ProteinID:
XP_035699322
UniProt:
A0A9J7MDP7
LinkDB
All DBs
Position
15:complement(20829905..20841679)
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AA seq
566 aa
AA seq
DB search
MATAEPRSILHRRPGKSNVLECGVCEDVFGLQGDKVPRLLLCGHTLCHDCLTRLPLHGRA
IRCPFDRQMTEIGDSGVWGLKKNFALLELLERLQFGRESPGALLCEVSMDTEKETTIRCD
ENEDHLATIYCTVCSTNLCAECAQSTHNTRTLAKHKLVPLHEKPREKPMCPLHQTHAIEF
VCLEESCLCNPLMCYVCKDYGKHQGHKHTLIENDAEQVRISIIDTLQHVKGFLDGVSDSA
RRLGNAIQQMEGCSRTVENEHGFTHTEQIHGTAEEARVRVRRYFQELHETLHRQENVALS
VVDTHVREKLCSLKQQQEDMAVVVSQVTTICLECEKMLQQDDHKVLLAKQEIRSLLDTVR
KQQQQFSDLPEQLHMDPGIPLTFTKDNRVHIGPKMEMRVVTLGLDESGKTAILFKLKQDE
FMQTIPTIGFNVETVEYKNLKFTIWDVGGKPKLRPLWKHYYLNTQAVIFVVDSADCARID
ETYDELSKLLAEKELREAVLLVFANKQDLPNALPIEEITDRLSLHKLCCGRSWHIQACDA
RTGMGLHDGLDWLSHQLVAAGVLDIS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcagagccaagaagtattttgcaccggagaccgggaaaatccaatgttctg
gagtgcggagtgtgcgaggatgtgttcggtctccagggcgacaaggtgccacgcctcctg
ctgtgcggccacaccctctgccacgactgtctcacgcggctgcctctacacgggcgcgcc
atacgctgtcccttcgacaggcagatgactgagattggtgactcaggtgtgtgggggtta
aagaagaactttgccctgctggagctgcttgaaagactgcagtttgggcgggagtcaccg
ggggcgctgctgtgtgaagtcagcatggacactgagaaagagaccacgattcggtgtgac
gaaaacgaagaccacctagcaaccatctactgtacagtctgcagtaccaacctgtgtgca
gagtgcgcccagtccacccacaacacacgcacgctcgccaagcacaagctcgtaccgctg
cacgagaaacctcgcgagaaaccgatgtgtccgctgcaccagactcacgccatcgagttt
gtgtgtttggaggagagctgtctgtgcaaccctctcatgtgttatgtgtgtaaggactac
gggaaacaccaagggcacaagcacacccttattgagaacgatgcggagcaggttcggatc
tccatcatcgacaccctgcagcatgtgaaaggcttcctggacggggtgtcggacagcgcc
cgtcgccttggcaacgccatccagcagatggaagggtgctcacggaccgtggagaacgaa
catggcttcacgcacacggagcagatccacgggacggcagaagaagctcgcgtccgcgtc
cgccgctacttccaggagcttcacgagacgctgcatcgccaggagaacgttgctctgagc
gtggtcgacacgcacgtacgcgagaaactctgctcgctgaaacagcaacaggaagacatg
gccgtggtggtgtctcaggtcacgaccatctgtctggagtgtgagaagatgctacaacag
gatgaccacaaggtcctgctggccaagcaggagatccgcagcctgttggacacggtcagg
aaacagcagcagcagttctcagacctgcctgagcagctgcacatggaccctggtatccct
cttacattcactaaggataaccgagttcacatcgggcctaagatggagatgcgggtcgtg
acgctgggtctggatgagtctggcaagacggcgatcctcttcaaactgaagcaggacgag
ttcatgcagaccatccccacaattggctttaatgtggaaacagtggagtacaagaacctg
aagttcaccatctgggacgttggtggaaaacctaaactccgcccgctgtggaaacattac
tacctcaacacacaggctgtgatatttgtggtggacagtgccgactgtgcacggatagac
gaaacttatgatgaactgtccaaactgctggctgagaaggagctgagagaagctgtgctg
ctggtcttcgccaacaaacaggacttgccgaatgcccttcctatagaggagatcacagac
agactcagcctacacaaactgtgctgtgggcgctcgtggcacatccaggcctgcgacgct
cggacagggatggggcttcacgacgggctggactggctatcacaccaactggtcgctgca
ggggtgctagacatttcttag
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