Branchiostoma floridae (Florida lancelet): 118432400
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Entry
118432400 CDS
T01074
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118432400
03036 Chromosome and associated proteins [BR:
bfo03036
]
118432400
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bfo03037
]
118432400
Enzymes [BR:
bfo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118432400
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118432400
UBL E3 ligases
118432400
Chromosome and associated proteins [BR:
bfo03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
118432400
Cilium and associated proteins [BR:
bfo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118432400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-rbx1
Baculo_IE-1
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_10
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
118432400
NCBI-ProteinID:
XP_035699848
UniProt:
A0A9J7MEP9
LinkDB
All DBs
Position
15:complement(4854902..4865681)
Genome browser
AA seq
1064 aa
AA seq
DB search
MATVQNQSPYIISSDSETEDSGIGKGVKKHGKAGRRSPIVFTRALSSSSESSDGDSSTSR
VQKPAPVSQSPDRNCSICLQQFQNKAFTDNCFHSFCYACIKEWSKVKATCPLCKTDFQSI
IHTVKSIDDYQQDYLLPLGNGTFGTIDGQRFRYRTTLNLGRRMITESRRRIDEQMAIFHS
YARHEVIHRGHYRPERRMSAISIRKRVYSRGLRARGVQGDEGRTRDITAEFYRSNPAVTH
RLVPWLSRELEALVASRDIVDFLLQLIVTVIQQVDLGSSTIKHTLEPYLLHRTDHFLHEF
TTFAKYPFDMAAFDRNVIYESPIFGDVSPISSPHTPNFDRLTPPELRNVGPTPYVPPVSS
VGNIPTSYLNWAPRHSTWDSPSVTPRTQPGSSVTSTSGWDDETPGPSGMNPDLEPTVPPT
KTAKAETEAPELISIKVEPNLNHSPANSSSGDSVVFTGYVKPLAERTPDAFISLSSGSED
EAPQDKNNTAQPKSPRRRYRSRSRNRRSRSRSRSREGRYRDFSRRNRSRSRTRRRSRSNS
RGRGHVRSRSRPRDRRQRSRSRSSRRSRSRSPSRGWWRNREKERLLSKPGGKRKQKTRHL
EGSPGESYRGSHREGTASSEQRGSSHSSHQPAASRSKNRGHEGRDQGRSHRSRSTERSWR
STSKDKSNRSKTKERSHRPRSKDRSPVSREREYRGRSHRSGSSDRHQLTYQQSPRSREEQ
SSLARYSGTFKNPDRTRRRSRSSSLEVTYEGKKKHDQYHRDSHSHRKQDNDSEVEVTFCK
MSSKESRTSKHHHHKSKRKHKHKKKSKKHKKSKEREKSAAKKIDDVSSTDDVESSVGDVE
CLSTVSVSEIGDGLDGTEERQDQAVSVVIEQDIRDNNKAQDSQNVQHCQESNMSTDCQDN
VNCELRHGEESDCTGRTEETCLRRTEEKTEPGEHTVNIHSETAPTLTDSAGLDSVSTTNV
PDNSKDGPNADSFLERNGDNDFSKSRVCQSERRVIRRSPEQEVMSQEGMMEEEVTSPERR
LDTVVSTQCTPGSHRRIVLTPKCQDERRIIISKNGGGRELNDKL
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggctacagttcagaaccagagcccctacatcatcagtagtgacagtgaaacagaggat
tctgggatcgggaaaggcgtgaagaagcacggcaaggcaggtcggaggtcaccaatagtc
ttcacccgagcactctcaagttcaagtgaaagttctgatggggacagcagtacaagtaga
gtacagaaaccagcaccagtgtctcagtccccggaccggaactgctccatctgtctgcaa
cagttccagaataaggctttcacagacaactgtttccactccttctgttacgcctgcatc
aaggagtggtcaaaggttaaggcaacatgtcccctgtgtaagacagatttccagtcgatc
atccacactgtgaagtccatagatgactaccagcaggactacctactgccactggggaat
ggaacctttggtaccatagatggtcagaggttcaggtacagaaccacgctcaacttgggg
cggcggatgatcacagaatcacgaaggagaatcgatgagcagatggccatcttccacagc
tacgcccgccacgaggtgatccaccgcggccactatcgtcccgagaggagaatgtctgca
atatccatacgcaaacgggtgtactctcggggactacgagcaagaggtgtgcagggggat
gagggtaggaccagggacatcacagcagagttctacaggagtaacccagcagttacacac
aggcttgtaccttggctgagtcgagagctggaagcgttggtggccagtagagacattgta
gacttcctactgcagctcattgtaacagtcatccaacaggttgacttgggaagctccacc
atcaagcacaccctagaaccatacctcctccacagaactgaccacttcctgcacgagttc
acgacttttgccaagtacccttttgacatggctgcctttgacagaaacgtcatttatgag
tctccaatttttggcgacgtttcgcccatatcctcaccccacacaccaaattttgaccgt
ttgactcccccggaacttcgcaacgttggccctacaccgtacgtgcctccagtcagcagt
gttggtaacatcccaacatcttacctgaactgggcacccaggcactccacgtgggacagc
ccctcggtcaccccgaggacccagcccggcagttcggtgaccagtacgtctgggtgggac
gatgagactccggggccttcagggatgaaccctgacctcgagccaactgtgcctcctact
aagacagctaaggctgagacagaagcaccagagctaatatctattaaggttgaacccaac
cttaaccatagccctgccaacagctccagtggggactctgttgtcttcactggctatgtt
aaaccactggcagagagaacaccagatgcgttcatcagtctatcctcagggtcggaggac
gaagctcctcaagacaagaacaacacagcacaaccaaagtcacccaggcgtaggtatcgc
tcaaggtcaaggaacagaaggtcaaggtcaagaagtagatcaagggaggggaggtacagg
gacttttccaggaggaacaggtcaagaagtaggacaaggagaagaagtcggtctaattcc
agaggcagagggcatgtcaggtcaaggagtaggccaagagacagacgtcaaaggtcacgg
agtaggtcaagtagacggtcccgcagtaggtctccaagtagaggctggtggaggaatcgg
gagaaggagcggctgttgagcaagccaggagggaagaggaaacagaaaacaagacacctg
gagggttctcctggtgaatcttacaggggaagccatagagagggtacagcatcttcagaa
caaaggggctcttctcactcctctcatcagcctgctgcatcaaggtcaaagaacagaggt
catgaaggcagggaccaaggcaggtcacacaggtcaagatccacggaaaggtcatggagg
tcaacatcaaaggacaagtcaaacaggtcaaagacaaaagagaggtctcataggccaagg
tcaaaagataggtcaccagtctcaagagagagggagtatagaggtcgttcacacaggtcg
gggtcatcggacagacatcagctaacatatcagcagtctcctcgttctagagaggaacag
agttccctagcaaggtactcgggcacgttcaagaacccggatagaacgcgccgccgaagt
cgcagctctagtctggaagttacctacgaggggaagaagaaacatgatcaataccacagg
gacagccacagccacaggaaacaagacaatgactcagaagtcgaggtcaccttctgcaag
atgtcttccaaagagtccagaacaagtaagcaccaccaccacaagagtaaaaggaaacac
aagcataaaaagaagagcaagaagcacaaaaagtccaaggaaagagagaaaagtgctgca
aagaaaattgatgatgtttcctcaacagatgacgtggagagcagtgttggtgatgtggag
tgtttgagtactgtttctgtgtctgagataggtgatggtttagatggtactgaagagaga
caagaccaggctgtgtcagttgtaatagagcaggacattagagacaataataaggcacag
gacagtcagaatgtgcaacactgccaagaatccaacatgagtacagactgtcaggacaat
gtgaattgtgagctgagacatggagaggaatcagactgtacaggcagaacagaagagacg
tgtttacgtaggactgaagaaaaaacagaaccaggagaacacactgtgaatatacacagt
gagacagcaccaacactgactgattctgcagggttagattctgttagcacgacaaatgtg
cctgataatagcaaagatggtcctaatgcagatagcttcctagaaagaaatggtgacaac
gacttctccaagtcacgtgtgtgccaatcagagagaagggtcatcaggaggtcacctgaa
caggaagtgatgtcacaagaaggaatgatggaagaggaagtgacatcaccagaaagaagg
ttggatacagttgtcagtacacaatgtaccccaggatcccacaggaggatagtccttaca
ccaaagtgtcaagatgaaaggagaattataatctcaaagaatggtgggggaagggagtta
aatgacaaactgtga
DBGET
integrated database retrieval system
