Branchiostoma floridae (Florida lancelet): 118432540
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Entry
118432540 CDS
T01074
Name
(RefSeq) DDB1- and CUL4-associated factor 11-like
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
bfo
Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:
bfo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bfo04121
]
118432540
Ubiquitin system [BR:
bfo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
118432540
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
PQQ
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
118432540
NCBI-ProteinID:
XP_035700053
UniProt:
A0A9J7NBD0
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Position
15:complement(21459590..21471178)
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AA seq
502 aa
AA seq
DB search
MSGEQDEQDDPDWGFDVIDGGDWSSEFESASGSDVSEFDLEDPGNLDWASFLEEAGLSLR
PKVCDTSRLQDSGFRQVALRRLGRVGHRYGDVTGRTVPQLVSRREHGLCQRNPGFSPGHR
ASIGSRFIPNVPNLQAKYGFKAFCGQYSRDGNVFLTACQDQRIRVYDTRRGSFRLKRTIQ
APNIEWSILDTALSSDGRYVVYSGWSDSIYVCEVLKKEGSVHQLPFSHDGFASCVFSLTF
SHDDSEIMGAANDGCLYVFDRRRQERTLCIHSHSNDANAVTFADASSQILFSGGDDGLLK
VWDRRMLSEENPREVGILLGHFDGITHIHSRGDNRFLISNSKDQTIKLWDIRKLSPAATV
KPSISKLRSMHRWDYRWQRTPSDRVTAPRLPGDTAVMTYAGHVVLRTLIRCYFSPDFTTG
QRFIYSGSANGDIFVYDVLTGEVAARLKGHRSCVRDVSWHPYSPRMLSVSWDCTVCRWEC
GTDDDEKFADALPSLITRGDAH
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgagcaggacgagcaggacgatcccgactggggttttgacgtgatagacggg
ggagactggagctccgagttcgaatcggcttccggctcagacgtgagtgagtttgacctg
gaggatcccggcaacttggactgggccagtttcctggaggaggctgggctgtcgctgcgg
ccgaaggtttgcgacacgtcccggctgcaggacagcggcttccggcaggtggcgctgcgc
aggctggggcgagtcgggcacaggtacggcgacgtcacgggcaggacggtcccacagctg
gtgtcgcggcgggagcacggcctgtgtcagcggaaccccggcttctccccgggacaccgg
gcctccatcggctccaggttcatccccaatgtccccaacctccaagccaagtacggcttc
aaggcgttctgcgggcagtactcgcgggacgggaacgtcttcctcaccgcctgccaggac
cagcggatccgcgtgtacgacacgcgccgcggcagcttccgcctgaagaggacgatccag
gcgccgaacatcgagtggagcatcctggacacggcgctgagctcggacgggcgctacgtg
gtgtactccggctggtcggacagcatctacgtgtgcgaggtgctgaagaaggagggcagc
gtgcaccagctgccgttctctcacgacggcttcgcctcctgcgtcttttccctcaccttc
tcgcacgacgacagcgagatcatgggcgcggcgaacgacgggtgcctgtacgtgtttgat
cggcgtcggcaggagcggacgctctgcatccacagccacagtaacgacgccaacgccgtg
acgtttgcggacgcgtcgtctcagatcctgttctccgggggagatgacgggctgctgaag
gtgtgggaccgccggatgctgagcgaggaaaacccgcgggaagtggggatcctgctgggc
cacttcgacggcatcacccacatccactcccgcggcgacaaccgcttcctcatctccaac
tccaaggaccagaccatcaaactctgggacatccgcaagctctcgcccgccgccaccgtc
aagccctccatcagcaagctgcggtccatgcaccgatgggactaccgctggcagaggacg
ccgtccgaccgcgtcacggccccgcggctgcctggcgacaccgcggtcatgacgtacgca
ggtcacgtggtgctgcggaccctgatcaggtgctacttctcgccagacttcaccaccggc
cagcggttcatttacagcggcagcgccaacggcgacatctttgtgtacgacgtgctgacg
ggggaggtcgcggccaggctgaaaggtcataggtcgtgtgtgcgagatgtgtcgtggcac
ccgtactcgccgcgcatgctcagcgtgtcctgggactgcaccgtttgccgctgggagtgc
ggcacggacgacgacgagaagttcgccgatgccttaccgtcgctcatcactaggggcgac
gcgcactga
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