Bombilactobacillus folatiphilus: MOO45_01090
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Entry
MOO45_01090 CDS
T08484
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bfp
Bombilactobacillus folatiphilus
Pathway
bfp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MOO45_01090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfp03019
]
MOO45_01090
03009 Ribosome biogenesis [BR:
bfp03009
]
MOO45_01090
Enzymes [BR:
bfp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MOO45_01090
Messenger RNA biogenesis [BR:
bfp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MOO45_01090
Ribosome biogenesis [BR:
bfp03009
]
Prokaryotic type
rRNA helicases
MOO45_01090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_22
DUF547
Motif
Other DBs
NCBI-ProteinID:
UQS82319
LinkDB
All DBs
Position
246898..248409
Genome browser
AA seq
503 aa
AA seq
DB search
MKFSELNLDQDILAAVTEAGFEEATPIQAQTIPLVLSGVDVIGQAQTGTGKTASFGLPLL
QTVDTHDSHVQALVISPTRELAVQTQEELHRLGRHRHVAVQAVYGGSDIRRQIQSLRNHP
QIVVGTPGRVLDHIKRHTLKLDQVQTVVLDEADEMLDMGFVEDIESILKNVQAEHQTLLY
SATMPRPIMNIAEKFMKDPKIVQIKSKELTADNIEQYVVRSKEFEKFNTMTRLFDVQKPE
LAVIFGRTKRRVDEITRGLKARGYNAEGIHGDLSQQKRMSVLKQFKAGKLEYLVATDVAA
RGLDISGVSHVYNYDIPQDPDSYVHRIGRTGRAGHSGVSVTFVSPNEMSYLRGIEQLTKV
RMMPLKPPTNEQALAGQLEDASAQIAHDLKSQHLTKFEVAAQELIEQYDATELVELLLKS
LTKDPEAIPVKITPERPLPNRRGRNNSRGGDRRSHGRYRGGNSNDRRRGNNDHRSRRNNN
GHHDSNNHGGGNRKRNFTVRTNK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttagtgaacttaatttagatcaagatatattggcagcagtcaccgaggcaggc
tttgaagaagcgacaccgattcaagcacagacgattccgttagttttgtcgggtgttgat
gtcattggtcaagcgcaaacaggaacaggtaagactgcgtcctttggtttgccattgtta
caaacggtagatactcatgattcacatgtgcaagccttggttatttcaccaactagagaa
ttagctgtgcaaacgcaagaagaattgcatcgcttgggtcggcatcgtcatgtcgctgtg
caagctgtgtatggtggttctgatattcggcggcaaattcaatctttgcgtaatcatccc
caaattgtggtaggaacgcctggtcgggttttggaccatattaaacgacacacgttgaag
ttagatcaagtccagaccgtggtgttagacgaagctgacgaaatgttggacatgggcttt
gtcgaagatattgaaagcatcttgaaaaatgtgcaagctgaacatcaaactttattgtat
tcagctacgatgccgcggccaattatgaatattgccgagaaattcatgaaagatccgaag
attgttcagattaagtctaaggaattaaccgctgataatattgaacaatacgttgtgcgg
tccaaagaatttgaaaaattcaatacaatgacgcggttgtttgatgttcaaaaacctgaa
ttagcagtcatttttggtcgaaccaagcggcgcgttgatgaaattacgcgtggactaaaa
gcacgtggatataacgctgaaggcattcacggagatttatcgcaacaaaaacggatgagt
gttttgaagcagtttaaagcgggcaaacttgaatatttggtggcaactgatgtggcagcg
cgtggcttagatatttctggtgtcagtcacgtttataattatgatattcctcaagatcca
gatagttatgtgcatcgaattggccggacaggtcgtgcaggacattctggggtatcagtg
acatttgtttcgccaaacgaaatgagttatttacgcgggattgagcaattaactaaagtg
cggatgatgcctttgaagccaccgaccaatgaacaagcattggcgggtcaattagaagat
gccagtgcacaaattgcccatgatttgaagagtcaacatttgactaaatttgaagtggca
gcgcaagaattgattgaacaatatgatgccacagaattggtcgaattattattgaaaagt
ttgacaaaagatcctgaagctattcctgtgaaaattactccggaacgcccattaccaaat
cggcgcggtcgtaataattcacgtggtggtgatcggcgttcgcatggtcgttatcgtggc
ggaaatagtaatgatcgccgccgtggcaacaacgatcatcgttcccgtcgtaacaacaat
ggtcatcatgattctaataatcatggcggtggtaatcgcaaacggaattttacggtgcgg
actaacaaataa
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