Bombilactobacillus folatiphilus: MOO45_03515
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Entry
MOO45_03515 CDS
T08484
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bfp
Bombilactobacillus folatiphilus
Pathway
bfp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MOO45_03515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfp03400
]
MOO45_03515
Enzymes [BR:
bfp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MOO45_03515
DNA repair and recombination proteins [BR:
bfp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MOO45_03515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_12
AAA_22
UvrD_C
SLFN-g3_helicase
AAA_16
nSTAND3
AAA_28
TraI_hel_assoc_N
AAA_5
RsgA_GTPase
AAA
PIF1
T2SSE
AAA_29
Mg_chelatase
TsaE
HHH_8
AAA_25
FtsK_SpoIIIE
UvrD-helicase
AAA_7
NPHP3_N
NTPase_1
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UQS82721
LinkDB
All DBs
Position
678692..681061
Genome browser
AA seq
789 aa
AA seq
DB search
MSDEYLVGKIQAVFFEKPEDYFKIMLIKVQETSFTWSDAEIVVTGTFDELDSEQNYRFTG
QLVEHPKYGQQFKCSHYQVETPLDQKALVAYFSSEQFPGIGKKTATKIVDILGEQAINLL
ITQPAAVKKLPLSTTKQKLLLEQVQSSYQSQEIILQLNQLGFGNKIALRIYHYYHEKTLE
VLQTNPYQLIQDVKGIGFRRADQLALNFGLASDSPQRAAAGLLHVLSMLTNSTGNTYCTK
ADLFNYTLKLLNVADQVVTTDDLEQALKKLIAENEIAVDQDCYFLQKLYENEWSIARQLS
LIETSFQNELINQSRVEQVFKQIAQNSAITYDQNQLLAIQQGLTHSVLLLTGGPGTGKTT
IINGLVNAFATLHEYSLDPADYEDTAFPVVLAAPTGRAAKHLMESTNLPASTIHRLLGLT
GQEEAEPSETNEIQGKILIVDEVSMVDTALFDLLLKAIPAGMQLVLVGDQDQLPSVGPGQ
VFHDLIQSQAFSTVNLEKIYRQDQDSTIVDLARQINLGEVNTKLFQNFADRSFFDCNANQ
VSHVLQQIVVKSRDKGFSLNDMQILAPMYRGPAGIDHLNQLMQETLNPLTLETKSVKFGD
VQYRIGDKVVQLVNDVEKNVFNGETGIVEGITLAKDNPDKKQGDVLHLDFDGRQIAYARA
DLKNISLAYCTSIHKAQGSEFPLVILILVKQHARMLKRNLLYTAITRAKSKLIMLGNHEA
FEQAVRDDSSQRQTRLLQRIQSTFKLAKKPLDQIDDHDLVLTLNKIQTHQIDPMIGLDGT
TPFDFMDIN
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgagtatctagtaggcaagattcaagcggtattttttgaaaagccagaagat
tacttcaaaattatgctcattaaagtacaagagacttcgtttacttggtcagatgcggaa
attgtagttacgggaacttttgacgaattagattcagagcaaaattatcgatttacaggt
caattggtggaacatcccaaatatggtcagcaatttaaatgtagtcattatcaagtagag
acaccgcttgatcagaaagctttggttgcgtatttttcaagtgagcagtttccaggaatc
ggtaagaaaacggctaccaaaattgtggatatcctaggcgaacaagcaatcaatcttttg
attacacaaccagctgctgtcaaaaaattacccttgagtacgactaaacaaaagttattg
cttgaacaagtacagtcatcttatcaatcacaggaaattatactgcaattaaatcaacta
ggttttggtaataaaattgccttacggatttatcattattatcatgaaaagacattagaa
gttttgcagacgaatccttaccaattgattcaagatgtgaaaggaattggttttcgaaga
gctgatcagttggcactcaattttggtttagcgagtgactcacctcaaagggcagcagct
ggtttgttgcatgtgttgagcatgctcactaattcaacaggtaatacgtattgtacaaag
gctgatttgttcaattatactttgaaattattgaatgtagctgatcaagtagttactaca
gatgatttagagcaagctttaaaaaaattgatagctgagaatgaaattgcggttgaccaa
gattgctattttttgcaaaaattatatgaaaatgaatggtctattgcccggcagttatct
ttaattgaaactagttttcaaaatgagttaatcaatcaatcacgagttgagcaagtgttc
aagcaaatcgctcaaaattcggccattacttatgatcaaaaccaacttttggcgattcaa
caaggtttgacacattcagttcttttgttaactggaggtccaggaactggaaaaacaacc
attattaatggtttagtgaatgcttttgcaactttacatgagtattcattggatcctgct
gattatgaagatacagcttttccagttgtattggcagcacccacgggtagagcagccaag
catttgatggaaagtaccaatttgccagccagtacaattcatcgattattaggtttgact
ggtcaagaagaggcggaaccttcagaaactaacgaaattcaaggcaaaattttgattgtg
gatgaggtctctatggttgatactgctttatttgatttattgctcaaagcaattccggcg
ggtatgcaattagttttggtaggtgatcaagatcaattaccttctgtggggccaggacaa
gtttttcatgatttaattcaaagtcaggctttttccacagtgaatttagaaaaaatttat
cgtcaagatcaagattcaacgatcgttgatctggcgcgacagattaatcttggtgaagtg
aatactaaattgtttcaaaattttgcggaccgaagtttttttgattgcaatgccaatcag
gtttcgcatgttctccaacaaatcgtagttaaaagtcgggataagggtttttcgttgaat
gatatgcaaattttggctcccatgtatcgtggacctgctggcattgatcatttgaatcag
ttaatgcaagagaccttgaatccgctaacgcttgaaaccaagtcggtcaaatttggtgat
gtacagtaccgaattggtgataaagttgtacaattagttaacgatgtagaaaagaatgtt
tttaatggcgaaactggcattgttgaagggattactttggctaaagataatccggataaa
aagcagggtgatgtattacacttagattttgatggtcggcaaattgcgtatgcacgggca
gacctaaaaaatattagtttggcttattgcacttctatccataaggcgcaaggtagtgaa
tttccattagttattttaattttagtgaagcaacatgcgcggatgctaaagcgcaactta
ttatatactgccattactcgtgctaaatcaaagttgattatgctggggaatcatgaagca
tttgagcaagctgtgagggatgattccagtcaacgacaaacgcgacttctgcagcggatt
caatcaacttttaaattagcaaaaaagccattggaccagattgatgatcatgatttggta
cttactttgaacaaaattcaaacgcatcaaattgatccaatgattggtttagacggaaca
acgccctttgattttatggatatcaattaa
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