Bombilactobacillus folatiphilus: MOO45_05030
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Entry
MOO45_05030 CDS
T08484
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bfp
Bombilactobacillus folatiphilus
Pathway
bfp03030
DNA replication
bfp03430
Mismatch repair
bfp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MOO45_05030
03430 Mismatch repair
MOO45_05030
03440 Homologous recombination
MOO45_05030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfp03032
]
MOO45_05030
03400 DNA repair and recombination proteins [BR:
bfp03400
]
MOO45_05030
Enzymes [BR:
bfp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MOO45_05030
DNA replication proteins [BR:
bfp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MOO45_05030
DNA repair and recombination proteins [BR:
bfp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MOO45_05030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
DNA_pol3_a_NII
tRNA_anti-codon
DEDDh_C
HHH_6
HHH_3
RNase_H_2
T2SSK
Zn_ribbon_13
Motif
Other DBs
NCBI-ProteinID:
UQS82904
LinkDB
All DBs
Position
complement(989617..993894)
Genome browser
AA seq
1425 aa
AA seq
DB search
MFQNLLNQIQLPDEMKQTPIFQSGQIKKVEVHTESQRWTFILDFAQILPASTWQIFQQHL
QTAFAGVKQVDFEVQVANPSVNSELLTAYWPLVVERQNFNLAMKRTLAQQSRLELQNQQL
NLIINNDILRDYLSQQYLNDLTQTLQQMGFPSFKLQVAVDQSQTKMQQEQLQQKQLQQQQ
QISVNVSHKKSSHPQTSSSGPIIGKKIAADAIVVSMEAITEEQQSVVVEGYIFSSEVRSL
RSGRQLLILEITDYTSSFVVKKFSKNGETAEVFDDFAKGTWLKVRGSVQEDNYTRELTIN
AYDLNVVKKRMREDQAQDKRIELHTHTNMSQMDAISSTTDLVKRAADWGQPAIAITDHST
AQSFPDAYAAGQKYSVKVIYGVEANLVDEGEPIAYNLRDENLADAEYVVFDVETTGLSAV
YDSIIELAAVKMKDGKIIQEFDEFIDPGHPLSATTINLTSITDDMVHNSNTEQEAMDKFN
DFMGGAILAGHNVTFDIGFLNAARRRCQYQPVSVPVVDTLEMSRTLHSEYRNHKLDSLAK
RYDIKLEHHHRANSDAATTGYLMYALFKEMNERFSITNVLQLNDHIGGDEAYKQARPYHA
ILLAQTQAGLKNLFKIISSSMTEYYFRTPRVPRRILNQYRNGILVGSACSSGEVFTAMMQ
KGYDEAYQKAQFYDYLEIMPHAIYQPLIESGLINNQTALEEIVANIVKLGQDLDKPVVAS
GDVHYLDAKDAIYREIIVKAVKSNPLARQTLPLADFKTTDEMLADLQFLGEQTAHQVVID
NPRIVADWVDDDITPVKDKLYTPKIPGSEQEIQDLTYNKAHELYGDPLPEIVQQRLDKEL
KSIIGNGFSVIYLIAQKLVYKSNKDGYLVGSRGSVGSSLVATMTGITEVNPLPPHYRCPN
CQYTEFYTQGEVGSGFDLADRLCPECQTELMKDGHDIPFETFLGFNGDKVPDIDLNFSGD
YQPIAHNYTKVLFGEDHVFRAGTIGTVADRTAYGYVSNFEELTDQKFRGAEKDRLAAGST
GVKRTTGQHPAGIIVVPDYMDIYDFTPIQYPADDQSAAWKTTHFDFHSIHDNILKLDILG
HDDPTMIRMLQDLSGIDPKTIPTDDPDVMSLFSGTEALGVTPEQINSKMGTLGVPEFGTK
FVRGMLEETHPTTFAELLQISGLSHGTDVWLGNAEEYIQQGIVTLKDVIGCRDNIMMDLI
HWGMEPGMSFQIMEHVRKGKGIPDEWQKVMQDNENVPDWYIDSCLKIKYMFPKAHATAYI
MMALRIAYFKVHMPIIYYCAYLSVRADVFDLVTMANGKEAVKNEIKLINEQGNDATAKDK
SLLTVLEIVNECLERDINIKMVDLEHSDAMNFKILDAHTLLAPFIAVPSLGLNVAKQIVA
AREEQPFLSKEDLSKRGHVSQSIIDYLTENKVLEGIPDENQLSLF
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaatttattaaatcaaatacagttgccagatgagatgaagcaaacgccaatt
tttcaatcaggtcaaattaaaaaagtcgaagtccatactgaatctcagcgatggactttt
attttagattttgcacagatattacctgcgtcaacttggcaaatttttcagcagcatctt
caaactgcatttgctggggttaagcaagttgactttgaggttcaagtagctaatccttct
gttaattctgagttgttaactgcgtattggccgttggtagtggagcgacagaactttaat
ttggcaatgaagcggactttagcgcagcagtcgcgtttggaattacaaaatcaacaatta
aacttgatcatcaataatgatattttgagggactatttgtcgcaacaatatttaaatgat
ttgacacaaacgttgcagcaaatgggttttccgtcgtttaaattacaagttgcagttgat
caatcacagacgaaaatgcagcaggaacaattgcaacaaaaacagttacagcagcaacaa
caaattagtgtcaatgtgtcacataaaaaaagtagtcacccacaaactagcagttcaggt
ccgataattggtaaaaaaattgctgctgacgctattgttgtatccatggaagcaatcact
gaagaacagcaatctgttgttgtagaaggatatatttttagttctgaagttcgtagcctg
cgatctggtcgacagttattaattttggaaattacagattacacttcatcatttgtagtc
aagaagttttctaaaaatggggagacggctgaagtttttgatgattttgctaagggcact
tggttaaaagttcgaggatctgtacaagaagataattatacaagagaattaaccattaac
gcatatgacttaaacgtggttaaaaaacggatgcgagaagatcaagctcaagataagcga
attgaattgcacacgcatactaatatgagtcaaatggacgctattagttccacaacagat
ttggttaaacgcgctgctgattggggacaaccagccattgccattactgaccattctacg
gcgcagtccttccctgatgcctatgcagccggacaaaaatacagtgtgaaagttatctat
ggtgttgaagctaacctggtggatgaaggtgaacccattgcctataatttacgcgatgaa
aatctagcagatgcggaatatgtagtatttgatgtggaaaccacaggattgtcggctgtt
tatgactcaattattgaattggcagcggtgaaaatgaaggacggtaaaattattcaagaa
tttgatgaatttattgatccgggtcatccactatcggctacaacgattaatttaacatca
ataactgatgacatggttcacaatagtaatactgagcaagaagcaatggacaagttcaat
gattttatgggcggtgctattttagcgggtcacaatgttacttttgatatcggatttttg
aatgcggctaggcgcagatgtcaatatcagccagtcagtgtgcctgttgtagatactttg
gaaatgtctagaacgttgcattccgaataccgcaatcataagctggatagtttagcaaag
cgttatgatatcaaattggaacatcatcatcgggctaattctgatgcggctaccacaggt
tatttgatgtatgctttgtttaaagaaatgaatgagcgattttcaattacaaatgttttg
cagttaaatgatcatattggtggtgatgaggcttacaagcaagcacggccttatcacgca
attttattggcacaaacacaggcaggcttgaaaaatttattcaaaattatctctagttcg
atgacggaatattattttcggacgccacgcgttccgcgcaggattttgaatcaatatcgt
aacggaatattagtcggttctgcttgtagttcgggcgaagttttcacagcgatgatgcaa
aagggttatgatgaggcttatcaaaaagcgcagttttatgattatttggaaatcatgccg
catgctatttatcagccgttaattgaatctggtttgattaataatcaaacagcgttggaa
gagattgtggcaaatattgtgaagttgggtcaggatttggataaacctgtcgttgccagt
ggtgatgtgcattatttggatgcaaaagatgcgatttatcgagaaataattgttaaagct
gtgaaaagtaatccattagctcggcaaacactgccacttgccgattttaaaactaccgac
gaaatgttggctgatttgcaatttttaggtgagcagacagcacatcaagttgtaattgac
aatccacgaattgtggctgattgggtagacgatgatattacaccggttaaggataagctt
tatacaccgaaaattccgggttccgaacaggaaattcaggatttaacctataataaggca
cacgaattatatggtgatccattgcctgagattgtccaacagcgtttggataaggaactt
aaaagtatcattggtaatggtttttcggtaatctatttaattgctcagaaattggtttat
aaaagtaataaagatggctatttagttggttcccggggctctgtgggctctagtttggta
gctactatgacaggaattacggaagttaatccgttgccgccacattatcgttgtcctaat
tgtcaatatacggaattttatactcaaggtgaggttggctcaggttttgacttggcagat
aggctttgtcctgagtgtcaaactgaattgatgaaagatggtcacgatatcccctttgaa
actttcctaggtttcaatggtgataaagtccctgatattgatttgaacttttcgggtgat
tatcaaccaattgcgcataattatacgaaagttttgtttggtgaagatcacgtttttcga
gcgggtacaatcggtactgttgcggatcgaacagcgtatggctatgtcagcaattttgaa
gaattaactgatcaaaaatttcggggagctgaaaaggaccgtttagctgctggttctacg
ggggtgaagcgaacgacggggcaacatccggcgggcattattgtagtgccagattatatg
gatatctatgactttacgccgattcaatatccggctgatgaccaaagtgcagcttggaaa
acaacgcattttgattttcattcgattcacgataatattttgaaactggatattttaggt
catgatgatccaacgatgatccggatgttgcaagatttgtcggggattgatccaaaaaca
attcccacagatgatccggatgtgatgtctttgttttcaggcacggaagcattaggagta
acacctgaacaaattaattctaaaatgggaaccctaggtgttcctgagtttggaaccaaa
tttgtccgtggtatgttggaggaaacgcatcccacaacttttgcagagttattacaaatt
tcaggtttgtcacacggaactgatgtctggcttggtaatgcggaagaatatattcaacaa
ggtattgtgacgttaaaagatgtgattggttgtcgtgataatatcatgatggacttaatt
cattggggcatggaaccggggatgtcgtttcagattatggaacatgttcgtaagggtaaa
gggattccagatgaatggcaaaaagttatgcaggataatgaaaatgtacccgattggtat
attgattcctgtttaaaaatcaaatatatgtttccaaaagcccatgcgacagcttatatt
atgatggctttacggattgcttattttaaagtccatatgccaattatttattattgcgcg
tacttgtctgtgcgggcggatgtatttgatttggtaaccatggctaatggcaaagaagcg
gtcaaaaatgagataaagttaatcaatgagcaaggcaatgacgcaaccgcaaaggacaaa
agtttattgactgtattagagattgtcaatgaatgtttggaacgtgatattaatattaag
atggttgatttggaacactcagatgcgatgaattttaaaattttggacgcacacacatta
cttgcaccatttattgcagttccaagtttgggtttgaatgttgctaaacaaattgttgcg
gcacgtgaagaacaaccatttttgtcaaaagaagatttatccaagcgtggtcacgtttca
caatcaattattgattatctaacggaaaataaagtattagaaggaattcccgatgagaat
caactatcgttgttttga
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integrated database retrieval system
