Bombilactobacillus folatiphilus: MOO45_06375
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Entry
MOO45_06375 CDS
T08484
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bfp
Bombilactobacillus folatiphilus
Brite
KEGG Orthology (KO) [BR:
bfp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfp03009
]
MOO45_06375 (rlmD)
Enzymes [BR:
bfp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MOO45_06375 (rlmD)
Ribosome biogenesis [BR:
bfp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MOO45_06375 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Cons_hypoth95
Methyltransf_15
MTS
Methyltransf_25
PrmA
RrnaAD
TRM5-TYW2_MTfase
N6_Mtase
A_deaminase
Methyltransf_32
DOT1
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
UQS81822
LinkDB
All DBs
Position
complement(1259511..1260869)
Genome browser
AA seq
452 aa
AA seq
DB search
MQTTKLTKNQIVTLDIIDLSYEGLGVAKVDGYPLFVENALPQEQVEAIITKVGRNFGFAK
TKKILQDSPDRVTDYDPKYIQTGIAPLIHWRYERQLAFKRQQVVNNFEKQHLDIEVHPTV
GAEHPLAYRNKAQIPVRTVKGQATTGFFRSRSHDLVPLEDYLIQDPKIDAEINRIRDLLR
QLQIQGYDENRNRGDVRHIMVRRATATGEMMVVLVITSTKMKHLPQLLAAIQANSEVTSL
YLNVNAKKTNVILGSKFELVAGQEYITDEILGKQFRISPQSFFQVNHEQTQKLYQLAIDA
AELTGQETVVDAYSGIGTIGLSMADHAQEVIGVEVVKQAVQDAQVNAAINGIDNAQFVVG
KTEDVLAKWAQEQRQIDVLVVDPPRKGLDASLISSIQALRPQKIVYISCNPATLARDLNL
LRADYQALHTTPVDMFPMTKHVESVTSLELIH
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaacgaaattaacgaagaatcaaattgtcacattagatattattgacttatca
tatgaaggtttgggcgtcgccaaggttgatggctatccattatttgtcgaaaatgctttg
ccacaagaacaagtcgaagcaattatcacgaaagttggtcgcaattttggttttgcgaaa
acgaaaaaaattttgcaggattcacctgatcgtgttacagattatgatcctaaatatatt
caaacaggaattgcgcccttgattcattggcgttatgagcgacaattggcgtttaaacgg
caacaagttgtaaataattttgaaaagcaacatttggatattgaggttcacccaacagtg
ggagcagagcatccgttagcttaccgcaacaaggcacagattcctgtgcggacggttaaa
ggtcaagcaacaactggtttttttcggagtcggtcgcacgatttggtgccattggaggat
tatctgattcaagatcccaagattgatgcggaaattaatcgaattcgggatttattgcgg
caattgcaaattcaaggttatgatgaaaatcgcaatcgtggtgatgtgcgacatatcatg
gtgcgccgggcaacagcaacgggcgaaatgatggtggtgctggttatcacatcgacgaaa
atgaagcatttaccacaattattggcagcaattcaggccaattctgaagtcacttcactg
tatttgaatgtgaatgcgaaaaaaacgaacgtgattttaggatcaaaatttgaattggta
gcaggacaagaatatattactgatgagattttaggtaagcaattccgaatttcaccgcaa
tcatttttccaagttaaccatgagcaaactcaaaagttatatcaattggcgattgatgcg
gcagaattgacgggtcaagaaaccgtagtggatgcttattcaggaattggaacgattggc
ttaagtatggccgatcatgctcaagaagtgattggtgttgaagttgtgaagcaagctgtt
caagacgcgcaagtgaacgctgcaattaacgggattgataacgcgcaatttgttgtaggt
aagacggaagatgtgttggctaaatgggcgcaagaacagcgccaaattgatgttttagtg
gtggatccgccccgcaaaggactggatgcgagtttgattagcagtattcaagcattgcga
ccacaaaaaattgtttatatcagctgtaatcccgcaacgctggcacgtgatttgaattta
ttgcgtgctgattatcaagcgttacacacaacacctgtggatatgtttccgatgaccaag
catgtggaaagtgtgactagtttagagttaattcattga
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