Brevundimonas fontaquae: JX001_02110
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Entry
JX001_02110 CDS
T09174
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bfq
Brevundimonas fontaquae
Pathway
bfq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JX001_02110 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfq03019
]
JX001_02110 (pnp)
03016 Transfer RNA biogenesis [BR:
bfq03016
]
JX001_02110 (pnp)
Enzymes [BR:
bfq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JX001_02110 (pnp)
Messenger RNA biogenesis [BR:
bfq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JX001_02110 (pnp)
Transfer RNA biogenesis [BR:
bfq03016
]
Prokaryotic type
tRNA degradation factors
JX001_02110 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QSF54645
UniProt:
A0ABX7LSC2
LinkDB
All DBs
Position
complement(438136..440370)
Genome browser
AA seq
744 aa
AA seq
DB search
MFDIKRKTIDWAGRPLTLETGRIARQADGAVLATYGETVVLATVVYGRAPKPGLDFFPLT
VNYQEKTFAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNETQVVVTVLQH
DMENDPDVLGMVAASAALTISGVPFMGPIGAARVGLIDGELVLNPAIDLIPSSDLDLVVA
GTQDALMMVESEAKELSEEKMLEALMFAHAGMQPVIDAIIELAEHAAKEPFDFQAEDHSD
VVASIKSLVGEDIKSAYTHAGKYERRSGVDAAKKAAAAKLVKTDENPDGVDGSKFSAAFK
ECEAEVLRRDIIENAHRVDGRALDKVRAIVSEVGVLPRTHGSALFTRGETQALVVATLGT
GEDEQYIDSLQGTYKENFLLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIRPMLPTK
EDFPYTIRLVSEITESNGSSSMATVCGSSLALMDAGVPLIRPVSGIAMGLILEPSGEFAI
LSDILGDEDHLGDMDFKVAGTAEGITSLQMDIKVAGITKEIMEQALTQASAGRLHILDEM
SKAMDAPRAELGEHAPKIETVKIPVDKIREVIGSGGKVIREIVEKTGAKIDIGDDGTIKV
AANDQEKIDAAKAWIQSIASEPEVGTIYSGKVVKVVDFGAFVNFFGAKDGLVHVSQIALE
RVANPADVLSEGQEVKVKFLGFDDRGKTKLSMKVVDQATGEDLTAKINAERAERGEEPLS
EDTGGRPKRDGGDRGGDRGRRRRD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacatcaaacgcaagacgatcgactgggccggccgcccgctgaccctggaaacg
ggccgcatcgcccgccaggccgacggcgccgtgctggcgacctacggcgagaccgtggtt
ctggccaccgtcgtctatggccgtgcgcccaagcccggcctggatttcttccccctgacg
gtcaactatcaggaaaagaccttcgccgccggcaagatcccgggcggctacttcaagcgt
gaaggccgtccgtccgagaaggaaaccctagtttcccgcctgatcgaccgtccgatccgg
ccgctgttcgtcaagggcttcaagaacgagacccaggtcgtcgtgaccgtgctgcagcac
gacatggaaaacgatcccgacgttctgggcatggtcgccgcctcggccgccctgaccatt
tcgggcgtgcccttcatgggccccatcggcgccgcgcgcgtcggcctgatcgacggcgag
ctggtgctgaaccccgccatcgacctgatcccgtcctcggacctcgacctggtggtcgcc
ggtacgcaagacgccctgatgatggtcgaatccgaagccaaggagctgtcggaagagaag
atgctcgaggccctgatgttcgcgcatgcgggcatgcagccggtgatcgacgccatcatc
gaactggctgaacacgccgccaaggagcccttcgacttccaggccgaagaccactccgac
gtcgtcgcctcgatcaagtcgctggtcggcgaagacatcaagagcgcctacacccacgcc
ggcaaatacgagcgccgttcgggcgtcgacgccgccaagaaggccgccgccgccaagctg
gtgaagaccgacgagaaccctgacggcgtcgacggttccaagttctcggccgccttcaag
gagtgcgaagccgaagtcctgcgtcgcgacatcatcgagaacgcgcaccgcgtcgacggc
cgcgccctcgataaggtccgcgccatcgtgtcggaagtcggcgtcctgccgcgcacccac
ggttcggccctgttcacgcgtggggaaacccaggccctggtcgtcgccaccctcggcacc
ggcgaggacgagcagtacatcgacagcctgcagggcacctacaaagagaacttcctgctg
cactacaacttccccccctattcggtgggtgaagcaggccgcatgggttcgcccggccgt
cgcgaaatcggtcacggcaagctggcctggcgcgcgatccgtccgatgctgccgaccaag
gaagacttcccctacaccatccgtctggtctccgagatcaccgagtcgaacggctcgtcc
tcgatggccacggtctgcggttcgtcgctggccctgatggacgccggcgtgccgctgatc
cgtccggtctcgggcatcgccatgggcctgatcctggagccgtcgggcgagttcgccatc
ctgtcggacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtcgccggc
acggcggaaggcatcaccagccttcagatggacatcaaggtcgccggcatcaccaaggaa
atcatggaacaggccctgacccaggcttcggccggtcgcctgcacatcctggacgagatg
tccaaggccatggatgcgccgcgcgccgaactgggcgagcacgcgcccaagatcgaaacg
gtcaagatcccggtcgacaagatccgtgaagtgatcggttcgggcggcaaggtcatccgc
gagatcgtcgagaagaccggcgccaagatcgacatcggcgatgacggcaccatcaaggtc
gccgccaacgaccaggagaagatcgacgccgccaaggcctggatccagtccatcgcctcg
gagccggaagtcggaaccatctactccggcaaggtcgtcaaggtcgtcgatttcggcgcc
ttcgtgaacttcttcggcgccaaggacggcttggtccacgtgtcgcagatcgctctggaa
cgcgtcgccaatccggccgacgtcctgtcggaaggccaagaggtcaaggtcaagttcctg
ggcttcgacgatcgcggcaagaccaagctgtcgatgaaggtcgtcgatcaggccacgggt
gaagacctgacggccaagatcaacgccgagcgcgccgagcgcggcgaagagcccctgtcg
gaagacaccggcggtcgtccgaaacgtgacggcggtgatcgcggtggcgatcgcggacgt
cgtcgtcgcgactga
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