Brevundimonas fontaquae: JX001_04545
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Entry
JX001_04545 CDS
T09174
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bfq
Brevundimonas fontaquae
Brite
KEGG Orthology (KO) [BR:
bfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfq03400
]
JX001_04545 (addB)
Enzymes [BR:
bfq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JX001_04545 (addB)
DNA repair and recombination proteins [BR:
bfq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JX001_04545 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QSF55084
LinkDB
All DBs
Position
complement(939772..942837)
Genome browser
AA seq
1021 aa
AA seq
DB search
MSVFDPFLGDTPRWYAIPAHRPFLEDLAAGVLAWLGDLPPETLSDATILLPNRRAARAFT
GALSKLSQGRPILLPQVRPLGDLEEDEPPFTPGALGLDLPPAIPALTRRFEMARMIVEQF
DGTLSPMRALDLADALGGFLDSCQLEEIQNPERIATLVDGEMAEHWERSAEFLGLAVEAW
PKRLAELGLVDPAWRRATLLRRLAELWDREPPRQPVIAAGSTGTVPAAGDVLKAVARAPL
GCVVLPGLDLDLDAGVWDRLDEQHPQSAMKRLLDRCEIARESGRAWFRPAVPAAVEARGL
ARQRLVNEALRPAEATDDWRRAIRDIRSAAAARKEARDPIAEGLQGLSLLSVRAEEEAAA
AIALMMRETLETPGKTCALVTPDQALGRRVAARLERWGIVPDSSAGAPLSRLPAGALIDL
CARWIADPVQPHLLLAVVKHPLARFDLGEASQAAAVAALEEHALRGPRPRNFAAIHRRLL
EAVQPDRRGKAPPEWKQARLSAATRLVDQLQAAIEAATPAFTPNADLNLAASALTRLIET
LAGQNAWAGPDGEAAAALLSGLIEGGASLGRIRRTELAELVTSLVKENVVRTGGATHPSL
RILGAIEARLVRADRMILAGLEEGVWPQAAPTDPFLSRPMRKALDLPPPERRLGQTAQDF
VQAACGDEVILIHRERRGGQPAVRSRWLWRLEMLTRGANAVETPVAIARPAAVIDWARAL
DAPPPGPPQFAKRPEPRPPVHRRPRSLYVTRIERWVRDPYAIYALWVLGLEAMERPGASA
EALARGNAVHAAIERLTLDWPDDLPDDCEAILHDHLLRELGARGFEDAAMAREAPLARNC
ARWLTEFERRRRARGVDILVEQQGTMTFDAPAGPFTVKAFADRIELASDGAAVMDFKTGA
APSAKQVKSGFAPQLTLTAAILADGGFKDTNGPVTPDELTYVRVVGRKTAGEVVTRASGL
EAADLAQAALDGLKRRVARFDDENTPYVSWAAPQFMGNQGGNYDHLARVWEWSVIGDGDE
E
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtcttcgatcccttcctgggcgacacgccgcgctggtacgccatccccgcgcac
cggccgttccttgaggacctggccgccggggtgctggcctggctgggcgatctgcctccc
gagaccctgtcggacgcgaccatcctgttgcccaaccgccgggcggcgcgcgccttcacc
ggcgccctgtccaagctgtcgcagggtcgtcccatcctgctgcctcaggtgcggccgcta
ggcgatctggaggaggacgagccgccgtttacgcccggcgccctgggtctggacctgccg
cccgccatccccgccctgacgcgccggttcgagatggcgcggatgatcgtcgaacagttc
gatgggaccctgagcccgatgcgcgcgctggatctggccgatgcgctgggcggcttcctc
gattcctgccaactggaagagattcagaaccccgagcggatcgccacattggtcgacggc
gaaatggccgaacactgggaacgatcggccgagtttctgggtctggcggtcgaggcctgg
cccaagcgtctggccgaactgggtctggtcgatccggcctggcgtcgcgcgaccctgctg
cgccgcctcgccgagctgtgggaccgcgaaccgccgcgccagcccgtcatcgccgccggc
tcgaccggcaccgtccccgccgccggcgacgtgctgaaggccgtggcgagggcgccgctg
ggctgcgtcgtcctgcccggcctcgacctggatctggacgcgggcgtctgggaccggttg
gacgaacagcatccgcaaagtgcgatgaagcggctgctggaccgctgcgagatcgcgcgc
gagagcggccgcgcctggttccgtcccgccgttcccgcggccgtcgaggcgcgcggactg
gcgcgccagcggctggtcaacgaggccctgcgccccgccgaggccaccgacgactggcgc
cgcgccatccgcgacatccgctcggccgccgctgcccgcaaggaagcgcgcgaccccatc
gccgaagggctgcagggcctgtcgctgctgagcgtgcgcgccgaggaagaggccgccgcc
gccatcgccctgatgatgcgcgagaccttggaaacgccgggcaagacctgcgccctggtc
acgccggatcaggccctgggccgccgcgtcgccgcccggctggagcgctggggcatcgta
cccgattcgtccgccggcgcccccctgtcgcgcctgcctgccggggccctgatcgatctg
tgcgcccgctggatcgccgatccggtccagccccatctgctgctcgccgtcgtcaaacat
ccgctggcccggttcgacctgggcgaggcctctcaagcggcagccgtcgccgcgctggag
gaacacgccctgcgcggtccccgcccgcgcaacttcgccgccattcatcgccgcctgctg
gaggcggtccagcccgaccggcgcggcaaggcgccgccggaatggaagcaggcccggctg
tcggccgcgacccgcctggtcgatcagcttcaggccgccatcgaggccgcgacgcccgcc
ttcacccccaacgcagatctgaacctcgccgcctcggccctgacccggctgatcgaaacc
ttagccggccagaacgcctgggccggtcctgacggcgaggccgcagccgccctgttgtcc
ggcctgatcgagggcggggcgtcgctcggccgcatccgccgcacggaactggccgaactg
gtcacgtccctggtcaaggaaaacgtcgtgcggaccggcggggcgacccatccgtcgctg
cggattctcggcgccatcgaggcgcgtctggtcagggcggaccggatgatcctggccggg
ctggaggaaggcgtctggccccaggccgcgcccaccgaccccttcctgtcgcgtccgatg
agaaaggcgctcgatctgccgccgcccgaacgtcgcctgggccagaccgcgcaggatttc
gtccaggccgcctgcggcgacgaggtcatcctgatccacagggagcggcgcggcggtcag
cccgccgtccgctcgcgctggctgtggcggctggagatgctgacgcgcggggcgaacgct
gtcgaaacgcccgtcgccatcgcccgcccggccgccgtcatcgactgggcccgcgccctg
gacgcccccccgcccggcccgccgcagttcgccaaacgcccagaaccgcgcccgccggtg
catcgccgtccgcgcagcctgtacgtcacccgcatcgaacgctgggtgcgcgatccctac
gccatctacgccctgtgggtgctggggctggaggcgatggagcggcccggcgcgtctgcc
gaagcgctggctcggggcaacgccgtccacgccgccatcgagcggctgacgctggactgg
ccggacgacctgcccgacgactgcgaggccatcctgcacgaccatctgctgcgcgaactg
ggcgcgcgcgggttcgaggatgcggccatggcccgcgaggcgccgctggcccgcaactgc
gcccgctggctgaccgaattcgagcgccggcgtcgggcgcgcggcgtcgatatcctggtg
gaacagcaggggacgatgaccttcgacgccccggccggccccttcaccgtcaaggccttc
gccgaccggatcgagctggcgtccgacggggcggcggtcatggacttcaagacaggggcg
gcgccgtccgccaaacaggtcaagtccggcttcgcgccgcagctcaccctgaccgccgcc
atcctggccgacggcgggttcaaggacaccaacggcccggtcacgcccgacgaactgacc
tatgtccgcgtggtcgggcgaaagacggcgggcgaagtcgtcacccgcgcttcgggcctc
gaggccgccgacctggcccaggcggcgctggacgggctgaagcgccgcgtcgcgcggttc
gacgacgagaatacgccttacgtttcctgggccgcgcctcagttcatgggcaaccagggc
ggcaactacgaccatctggcccgcgtctgggaatggtcggtgatcggcgacggggacgaa
gaatga
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