Brevundimonas fontaquae: JX001_07080
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Entry
JX001_07080 CDS
T09174
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bfq
Brevundimonas fontaquae
Brite
KEGG Orthology (KO) [BR:
bfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfq03032
]
JX001_07080
03400 DNA repair and recombination proteins [BR:
bfq03400
]
JX001_07080
Enzymes [BR:
bfq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JX001_07080
DNA replication proteins [BR:
bfq03032
]
Prokaryotic type
DNA Topoisomerases
JX001_07080
DNA repair and recombination proteins [BR:
bfq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JX001_07080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
PB1
Motif
Other DBs
NCBI-ProteinID:
QSF55537
LinkDB
All DBs
Position
complement(1458710..1459732)
Genome browser
AA seq
340 aa
AA seq
DB search
MADGSHAFDIAAEVPQGLSYCSDEFAGLTRRRAGKGWSYRDAKGKTVTDAKTLARIRALA
IPPAWTDVWICPKANGHIQATGRDVKGRKQYRYHNDWSTARSENKFDKLPAFSRNLPKLR
EKVEHDLALRGVCRDKVLATAVRLLEITLIRVGNSIYAKQNRSYGLTTLHKRHIDVDGAA
LTFEFRGKSGKDHSVSVKDRRLAKVVRQLEGLPGQQLFKYRAADGTLCPVDSDDVNAYIR
EAMGEQFSAKDFRTWAGTVSAARALRDTEAPTSPTDARRKITVCVKAVAGLLGNTPTVCR
ASYVHPKVFALFESGEIGKALPGSETKGFEKALIKQLLAV
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggatcgcacgccttcgacatcgccgccgaagtcccccaaggcctcagctat
tgcagcgacgagttcgcaggcctgacgcgccgccgcgccggcaagggttggtcctatcgc
gacgccaagggcaagaccgtcacggacgccaagaccctggcccgcatccgcgccctggcc
attccgcctgcctggactgacgtctggatctgtcccaaggccaacggccatatccaggcg
accggccgggatgtgaagggccgcaaacaataccgctatcacaacgactggagcacggcc
cgctccgagaacaagtttgacaagctgcccgccttctcgcgcaacctgccgaaactgcgc
gagaaggtcgaacacgacctggcccttcgcggcgtctgtcgcgacaaggtgctggcgaca
gccgtgcgcctgctcgagatcaccctgatccgggtcggcaactccatctacgccaaacag
aaccgcagctacggcctgacgaccctgcacaagcgccacatcgatgtggatggtgcggcc
ctgacgttcgagtttcgaggcaagagcggcaaggatcacagcgtcagcgtcaaggaccgc
cgcctggccaaggtcgtgcgacagctggaaggcctgcccggccagcagctgttcaaatac
cgcgcggccgacggcacgctgtgcccggtcgattccgatgatgtgaacgcctacatccgc
gaggcgatgggcgagcagttctcggccaaggacttccgcacctgggccggcaccgtctcg
gcggcgcgggcgctgcgcgacaccgaggccccgacctcgcccaccgacgccaggcgaaag
atcaccgtctgcgtgaaggccgtcgccggcctcttgggcaacacccccaccgtctgccgc
gcttcctacgtccaccccaaggtcttcgccctgttcgaaagcggcgaaatcggcaaggcc
ttgccggggtcggagaccaaggggttcgaaaaggcgctgatcaaacagctgctggcggtg
tga
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