Brevundimonas fontaquae: JX001_10305
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Entry
JX001_10305 CDS
T09174
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bfq
Brevundimonas fontaquae
Brite
KEGG Orthology (KO) [BR:
bfq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfq03400
]
JX001_10305
Enzymes [BR:
bfq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JX001_10305
DNA repair and recombination proteins [BR:
bfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JX001_10305
Prokaryotic type
JX001_10305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QSF55875
LinkDB
All DBs
Position
2096419..2097894
Genome browser
AA seq
491 aa
AA seq
DB search
MTEFARVATKPVILWFRRDLRLHDNPALNHAAETGRPILPVYILDEHGERPMGAASRWWL
DKSLRALDAALQERGSRLILRKGNAPTQLQALIAETGADVVFMNRLFEPETFEYDAEIAH
TLKADGVECRGFNGALLCRPGEVLNGSGQPYKVFTPFLRALLATAEAPAHTTGPRQIQTP
KTVQSHDLDSWKLHPRRPDWSKGFDWTPGEDGASQALSRFIPSGLKTYAKDRDFPDRQGA
NSRLSPHLHWGEISPWRAIDRARQAAKDGKVSSAESDKFIAEIGWREFSAHLLHHFPYIA
ERAFRPEYDAMPWRKDDASLKAWRQGRTGYPLVDAGMRQLWTTGWMHNRVRMVVASFLIK
HLLIDWREGEAWFWDTLVDADRASNVQNWQWVAGSGADASPFFRIFNPITQGEKFDPDGG
YVRRWVPELRHLPDRWLQSPWTAPAEVLRDAGIVLGRDYPKPIVEHEKGRARALAALKTV
SGRGDDHSDRD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atcacggagttcgcccgcgtggccaccaaacctgtcatcctgtggttccgccgcgatctg
cgactgcatgacaatcccgccctgaaccacgcggcggagaccgggcgaccaatcctgccc
gtctatattctggacgagcatggcgaacggccgatgggcgccgcgtcgcgctggtggctc
gacaagtctttaagggcgctggatgcggcgcttcaagagcgcggttcgcgcctgatcctg
cgcaagggcaatgctccgacccagctccaggcgctgatcgccgaaaccggcgccgacgtc
gtcttcatgaaccgcctgttcgaacccgagacgtttgagtacgacgctgagatcgcccat
acgctcaaggcggacggcgtcgaatgccggggcttcaatggcgccctcctctgccgccct
ggcgaggtgctgaacggttcgggccaaccgtacaaggtcttcactccgttcttgagggcc
ctgctggccacggccgaggcgccggctcacacaaccggaccccgccagatacagacgccc
aaaacggttcaatcccacgacctcgacagttggaagctgcacccccgccgaccggattgg
tccaagggcttcgactggacgccgggggaggatggggcctcgcaggccttatccaggttc
ataccttccggcctgaagacctatgccaaggatcgcgactttcccgaccggcaaggcgcc
aacagccgcctgtcgccgcatcttcactggggcgagatcagcccttggcgtgcgatagac
cgagcccgacaggcagccaaagatggcaaggtgtcgtcggcggagtccgacaaatttatt
gctgagatcggctggcgcgagttctccgcgcacctgctgcaccattttccctacatcgcc
gagcgcgcgttccgtcccgaatatgacgccatgccctggcgtaaggacgacgcgagcctt
aaggcgtggcgacaggggcggaccggatacccgttggtggacgccgggatgcgtcagctc
tggacgacggggtggatgcacaatcgggtgcgaatggtcgtcgcctccttcctgatcaaa
catctgctgatcgactggcgcgaaggcgaagcctggttctgggacacgctggtggacgcc
gaccgggccagcaatgtgcagaactggcagtgggtcgcagggtcgggcgcagacgcctcc
cccttcttccgcattttcaatcccatcacgcagggcgaaaagtttgatcccgacggcggc
tatgtccgtcggtgggtgccggaacttcgccacctgccggaccgctggctacagtcgccc
tggaccgcacccgctgaagtgctgcgtgacgccgggatcgttttagggcgcgattacccc
aagccgatcgtcgaacacgagaagggccgcgcccgggcgcttgctgccctgaagaccgtt
tccggtcgcggcgacgaccacagcgaccgtgattga
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