Bacteroides fragilis YCH46: BF0028
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Entry
BF0028 CDS
T00202
Name
(GenBank) conserved hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bfr
Bacteroides fragilis YCH46
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfr03016
]
BF0028
Enzymes [BR:
bfr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
BF0028
Transfer RNA biogenesis [BR:
bfr03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
BF0028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BAD46777
UniProt:
Q650P7
LinkDB
All DBs
Position
34759..36132
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AA seq
457 aa
AA seq
DB search
MNELTGADFKSATADDNKKLFIETYGCQMNVADSEVIASVMQMAGYSVAETLEEADAVFM
NTCSIRDNAEQKILNRLEFFHSMKKKKKHLIVGVLGCMAERVKDDLIEHHHVDLVVGPDA
YLTLPELIASVEAGEKAMNVELSTTETYRDVIPSRICGNHISGFVSIMRGCNNFCTYCIV
PYTRGRERSRDVESILNEVADLVSKGYKEITLLGQNVNSYRFEKEGGEVVTFPMLLRLVA
EAAPGIRVRFTTSHPKDMSDETLEVIAQVPNVCKHIHLPVQSGSSRILKLMNRKYTREWY
LDRVAAIKRIVPDCGLTTDIFSGFHSETEEDHRESLSLMEACGYDAAFMFKYSERPGTYA
SKHLEDNVPEEIKVRRLNEIIALQNRLSAESNNRCIGKTYEVLVEGVSKRSRDQLFGRTE
QNRVVVFDRGTHRIGDFVNVRITEASSATLKGEEVFS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaattgacgggagcggactttaaatccgcaactgctgatgacaacaagaagttg
tttatcgagacttatggctgccaaatgaatgtggcagatagtgaagtaatcgcctctgtg
atgcaaatggcgggttattcggttgccgaaacgctggaagaggctgatgcggtgtttatg
aatacctgttctatccgtgacaatgccgaacagaagattttgaatcgtctggagttcttt
cattcgatgaagaagaaaaagaagcaccttattgtaggtgtattggggtgtatggccgag
cgggtaaaagatgatctgatagaacaccatcatgtggaccttgtagtaggaccggatgct
tatctgactcttcctgagttgattgcttcggtagaggccggtgagaaggcaatgaatgta
gaactttcgactactgaaacctaccgggatgtgattccttcgcgtatctgtggtaaccat
atctccggatttgtatccatcatgcgcggatgcaataacttttgtacctattgtattgtg
ccttatacccgtggacgtgaacgtagccgggatgtggagagtatattgaatgaagtggcc
gatttggtatcaaaaggttacaaagagatcactctgctggggcagaatgtaaactcttat
cgttttgagaaggaggggggggaagtagttactttcccaatgttacttcgtctggtggct
gaggctgcaccgggaatacgtgtccgtttcaccacttcgcatcccaaagatatgagtgat
gaaaccttggaggtgattgcacaggttcctaacgtatgcaaacacattcaccttcccgta
caaagcggaagttcgcgtatcctgaaattgatgaatcgcaaatatacgcgtgaatggtat
ctggaccgggtagcggcgatcaaacgtattgtgcccgattgcggacttactaccgatata
ttttccggcttccattccgaaacggaagaagaccatcgggaatcactttcgttgatggaa
gcttgtggttatgatgcagcatttatgtttaaatattcggagcgtcccggtacttatgct
tccaagcatctggaggacaacgttcccgaagagataaaagtccgtcggctgaatgaaatc
attgctttgcagaatcgtttgtcggccgaatccaataatcgttgcatcggtaaaacgtac
gaagtgttggttgaaggtgtttcgaagcgttcacgcgaccagctgttcggccggaccgaa
cagaatagggtagtggtattcgaccgcggtacccatcggataggtgatttcgtgaatgtg
agaatcacggaggccagttctgccacattgaagggtgaagaagtcttcagctaa
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