Bacteroides fragilis YCH46: BF0091
Help
Entry
BF0091 CDS
T00202
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bfr
Bacteroides fragilis YCH46
Pathway
bfr03030
DNA replication
bfr03410
Base excision repair
bfr03420
Nucleotide excision repair
bfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BF0091
03410 Base excision repair
BF0091
03420 Nucleotide excision repair
BF0091
03440 Homologous recombination
BF0091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfr03032
]
BF0091
03400 DNA repair and recombination proteins [BR:
bfr03400
]
BF0091
Enzymes [BR:
bfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BF0091
DNA replication proteins [BR:
bfr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BF0091
DNA repair and recombination proteins [BR:
bfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BF0091
NER (nucleotide excision repair)
GGR (global genome repair) factors
BF0091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
BAD46840
UniProt:
Q650I4
LinkDB
All DBs
Position
complement(101025..103832)
Genome browser
AA seq
935 aa
AA seq
DB search
MNQNSKLFLLDAYALIYRAYYAFIKNPRINSKGFNTSAILGFVNTLEEVLKKENPTHIGV
AFDPPGPTFRHEAFEQYKAQREETPEAIRLSVPIIKDIIKAYRIPILEVAGYEADDVIGT
LATEAGNQGITTYMMTPDKDYGQLVTDHVFMYRPKYGDKEFEVMGVEQVKAKFDIQSPAQ
VIDMLGLMGDSSDNIPGCPGVGEKTAQKLIAEFGSIENLLEHTDQLKGALKTKVETNREM
IIFSKFLATIKVDVPIRLDMNSLVREQADEDTLRKIFEELEFRTLMERIFKKESSPASPI
AGTLFNQENGPVQGNLFEEFTPDHTNEEKKSNLESLNSLSYDYQLIDTEEKRNEIIKKLL
TSEILALDTETTGTDPMDAELVGMSFSITENQAFYVPVPAEREEAIKIVREFEPVFKNEK
SLKVGQNIKYDMLVLQNYGIEVRGKLFDTMVAHYVLQPELRHNMDYLAEIYLHYQTIHIE
ELIGPKGKGQKNMRDLSPQEVYLYACEDADVTLKLKNILEQELKKNDAEKLFYEIEMPLV
PVLVNIESNGVRLDTEALKQSSEHFTTRLQSIEKEIYTLAEGEFNIASPKQVGEILFDKL
KIVEKAKKTKTGQYVTSEEVLESLRNKHDIIGKILEYRGLKKLLSTYIDALPQLINPKTG
RIHTSFNQTVTATGRLSSSNPNLQNIPIRDEDGKEIRKAFIPDDGCSFFSADYSQIELRI
MAHLSEDKNMIDAFLSGYDIHAATAAKIYKVDIKEVTADMRRKAKTANFGIIYGISVFGL
AERMNVDRKEAKELIDGYFETYPQVKSYMDKSIQVAREHGYVETIFHRKRFLPDINSRNA
VVRGYAERNAINAPIQGSAADIIKVAMARIYERFKAEGLKAKMILQVHDELNFSVPAKEK
EIVEQVVIEEMEKAYRMHVPLKADCGWGTNWLEAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaacagcaaactattcctcttggatgcttatgctcttatctatcgggcgtac
tatgcgttcattaaaaatccccgcattaattccaagggttttaatacttcagccatactg
ggattcgtcaacaccctggaagaggtgctgaagaaagagaaccccacccacattggagtt
gcattcgatccaccgggacccacattccgccacgaagcttttgaacagtacaaagctcaa
cgagaagaaactccggaagcaatccgtctttcggtacctattataaaagatattatcaag
gcttaccgaatccccatcctggaggtagcgggatatgaagcggacgatgtaatcggaact
ctggcaacagaagccggcaatcagggtatcactacttatatgatgactcctgacaaggac
tatggtcagttggtaacggatcatgtatttatgtatcgccccaaatatggagacaaagaa
tttgaagttatgggggtagaacaagtaaaagctaaattcgatattcaatcaccggcacaa
gtgatagatatgctcggactgatgggcgactcttccgataatattccggggtgtccgggt
gtgggagaaaaaactgcccaaaaattaattgccgagtttgggagtatagaaaatctgctt
gaacataccgatcagttgaaaggagcactgaagacaaaagtcgagacaaatcgggaaatg
attattttctccaaattcctggcaacaatcaaagtggatgtacctatccggctcgatatg
aactcactcgtccgggaacaagcagatgaggacacgttgcgtaaaatatttgaagagctg
gaattccgcacattgatggaacggatattcaaaaaagaatcatcacctgcctcccctatc
gccggtacattatttaatcaggaaaacggcccggttcaaggcaatctctttgaagaattt
acgcccgatcatacgaatgaagaaaaaaaatcaaatctggaaagcttaaattcattaagc
tacgactaccaattaattgatacagaggagaaaagaaacgaaattattaaaaaactactt
acatccgaaattcttgcgttagatacggaaaccaccggaacggatccaatggatgcagaa
ttggttggaatgagttttagtattaccgaaaatcaggcattttacgttccggtacctgcc
gaacgggaagaggcaatcaaaatcgttcgggagttcgaacctgtcttcaaaaacgagaag
tcactcaaggtcggtcagaatataaagtacgacatgctcgttctgcaaaactatgggatt
gaagtccgaggtaaactcttcgataccatggtagcacattatgtcctccaacccgaactc
cgtcataacatggattatctggccgaaatctatctgcattatcaaaccatacatattgaa
gagttaatagggccaaaaggcaaagggcagaaaaatatgcgcgacctctcccctcaagaa
gtttatctgtacgcctgcgaagatgcagacgttacactaaaacttaaaaatatactggaa
caggaattaaagaaaaatgatgccgagaagttattctatgaaatcgaaatgcctctggtc
cctgttcttgtcaatatcgagagcaacggagtgcgtttagatacggaggctctgaaacaa
tcgtcggaacacttcactacgagactgcaaagtatcgaaaaagaaatttatactctcgcc
gaaggagaattcaacattgcatctcccaaacaggtaggagagatactttttgataaattg
aaaatagtagagaaagctaaaaaaacaaaaaccggacagtacgtcacctcagaagaagta
ttggagagcttgcgaaataagcacgatatcatcggtaagattttggaataccggggactt
aagaaactattaagtacttatatcgatgctctgccgcaattgatcaatcccaaaaccgga
cgtatacacacctcctttaaccagaccgttaccgcaacaggaagattgagttcaagtaac
cctaacctgcagaatatcccgatccgggacgaagacggtaaagagatacgcaaagctttt
attccggatgatggttgcagtttcttctccgccgactattcacagattgagctacgcata
atggcacacctgagtgaagataaaaacatgatcgatgctttcctcagtggctatgatatt
catgcggctacagctgccaagatttataaggtagatataaaagaggttaccgccgatatg
cgccgtaaggccaagactgccaatttcggtattatctacggtatctccgtatttggcctg
gcggaacgcatgaatgtcgaccgcaaagaagccaaagagctgatagacggttattttgaa
acctatccgcaagtaaaatcctatatggacaagagtatccaggtggcacgcgagcacggt
tatgtggaaacgattttccatcgcaaacgctttttaccggatattaactcccgtaatgcc
gtagtacgcggatacgcagagcgaaatgccatcaatgctccgatacagggaagcgcagct
gacataatcaaagttgctatggcacgtatttatgaacgtttcaaagcagaaggcctgaaa
gcaaaaatgattttgcaagtacacgatgagctgaatttcagtgtaccggcaaaagagaaa
gaaatagtagagcaagtggttattgaggaaatggagaaagcctaccgtatgcatgttccc
ttaaaagcagattgcggatggggtacaaactggctggaggcacattga
DBGET
integrated database retrieval system
