Bacteroides fragilis YCH46: BF0386
Help
Entry
BF0386 CDS
T00202
Name
(GenBank) putative outer membrane protein probably involved in nutrient binding
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
bfr
Bacteroides fragilis YCH46
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bfr02000
]
BF0386
Transporters [BR:
bfr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BF0386
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_1
TPR_2
TPR_19
TPR_12
TPR_14
TPR_16
TPR_4
DUF2625
Motif
Other DBs
NCBI-ProteinID:
BAD47135
UniProt:
Q64ZE1
LinkDB
All DBs
Position
complement(449351..451198)
Genome browser
AA seq
615 aa
AA seq
DB search
MKLLNKLFILTATAIAISSCQGDLLDTKPYDKASSGSMWSNENFCTMGVASIYATLREGY
VAKEAYLMEAFSVGATCRDNDYPLLAGTASIGSGIFSDYWKQHYAGIYRANDAIVHLPDA
PISESVKGKLLSEAKVLRAFYYYKLNAVFRGVPYYNTPMELDQADKPRESEENIWNFCIQ
DLTDAINDPNFPDRIAAGKAEWGHVTKSVAYALRGKIYLWTKEWSKAEADFRKVGELGHS
LFQDGYKQLFKEANEQSDEAIFSLQCIDNNGSTYGNSMSFRYGGRTTFGSCWNTMLASVD
FVETYENIDGSKFNWDEYIPGFSSLDIKDREVFFLRNTDPATVKAQYREIGFDGTEEALD
DMVKKIKAKVDGRLEKLSDKAKALYLPAGNEARIKAAYDSRDPRLAQTVITPYATYDGSG
NSVDHTFTSRWPYYGADTDYPYDLRTDTQSHLYYLFRKFVAEGSSEMTNREQSPIDLPII
RYATVVIGLAEALNEQGKTDEAIEWLNKVRQRAGVALLNSNTATMVQGQEDMRVRIQNEF
RWETAGEGVDFYEELRWKTWKESKFNNADGTAGMKDVWGTITYPYTWGGDQYYVWPIPKH
ETDMNKSLTQNSGWN
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaaactattaaataaattattcatattaacagccacagcaattgctataagcagttgc
caaggagatttactggacacaaagccatatgataaagcatcatcgggcagtatgtggagt
aacgaaaacttttgtactatgggagtagcatctatctacgctaccctgcgcgaaggttat
gtagcaaaagaggcttatctaatggaggcattcagcgtgggagcaacctgccgtgacaac
gattatccgctactggccggtacagcttccatcggttccggaatattctcagactattgg
aaacaacattatgcaggtatctaccgtgccaatgatgccattgtacatctacccgacgca
ccgataagtgaaagcgtaaaaggtaaattattatccgaagcaaaagtattgcgtgcattt
tattattacaaactgaatgcagttttcaggggtgttccttattataatacgcctatggaa
cttgatcaggcagacaaaccacgtgaaagcgaagagaatatatggaatttctgcatacaa
gatttaaccgacgcaataaatgatccgaattttcccgaccgtatcgctgccggtaaagca
gaatggggtcatgtcaccaaatcagtggcttatgcattacgtggaaaaatctatctatgg
accaaagaatggagcaaagcggaagcagatttccgtaaagtaggtgaattgggacattca
ttatttcaggatgggtacaagcaactcttcaaagaagctaatgaacagagtgatgaagct
atcttctctttgcagtgtatcgataataatggtagcacttacggaaattccatgagtttc
cgttatggtggtcgtaccacatttggttcttgctggaacactatgttagccagtgtggat
tttgtagaaacctacgaaaatatagacggcagtaaatttaactgggatgaatacattccg
ggattctcaagcttagatattaaagaccgtgaagtattcttcttgcgtaatactgatccg
gcaacagtaaaagcacagtatcgcgaaatcggctttgacggcacggaagaggcattagac
gacatggtaaaaaaaataaaagccaaagtagacggacgtctggagaagttgagtgacaag
gcaaaagcattatatctcccggcaggaaacgaggctcgtatcaaagctgcttatgacagc
cgcgatcctcgtttagcccaaactgtcatcactccatatgctacatatgacggttcggga
aacagtgtagaccacaccttcacttcacgctggccctactatggtgctgacaccgattat
ccttatgacttacgtactgacactcagagccatttatactatttgttccgcaaatttgtt
gctgaaggttcaagtgagatgaccaatcgtgaacaatctccgattgacctgccaattatc
cgctacgcaactgtcgtcataggattggcagaagcattgaatgagcagggtaaaaccgat
gaggccatcgaatggctgaataaagtacgccaacgtgccggtgttgcactgttgaacagc
aatactgccactatggttcagggacaggaagatatgcgcgttcgtatccagaatgaattc
cgctgggaaacagcaggtgaaggagttgacttttacgaagaactccgttggaaaacatgg
aaagaaagtaaatttaataatgctgatggtacagccgggatgaaagatgtatgggggact
atcacctatccttacacatggggaggagaccaatattatgtatggccaatcccaaaacat
gaaactgatatgaacaaatccctgacccagaattcgggctggaattaa
DBGET
integrated database retrieval system
