Bacteroides fragilis YCH46: BF0605
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Entry
BF0605 CDS
T00202
Name
(GenBank) putative DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
bfr
Bacteroides fragilis YCH46
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfr03400
]
BF0605
DNA repair and recombination proteins [BR:
bfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BF0605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
AAA_16
nSTAND3
AAA_24
AAA
AAA_14
NTPase_1
Elong_Iki1
DUF7129
AAA_29
HypA
zf-RING_10
AAA_5
Nitro_FeMo-Co
DZR
NACHT
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
BAD47354
UniProt:
Q64YS2
LinkDB
All DBs
Position
complement(713014..714381)
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AA seq
455 aa
AA seq
DB search
MAKEKTVYVCSNCGQESPKWVGKCPSCGEWNTYVEEIVRKEVPNKRPVSGIESPKAKPVT
LSEIEADEEPRIDMHDEELNRVLGGGLVPGSLVLIGGEPGIGKSTLVLQTVLHMPERRIL
YISGEESARQLKLRADRLTRTSSDCLIVCETSLEQIYVHIKNTRPDLVIIDSIQTISTES
IESSPGSIAQVRECSASILRFAKETHTPVLLIGHINKEGSIAGPKVLEHIVDTVLQFEGD
QHYMYRILRSIKNRFGSTAELGIYEMRQDGLRQVSNPSELLLSQDHEGMSGVAIASAIEG
VRPFLIETQALVSSAVYGNPQRSATGFDIRRMNMLLAVLEKRVGFKLAQKDVFLNIAGGL
KVNDPAIDLAVISAILSSNMDAAIEPEVCMAGEIGLSGEIRPVNRIEQRIGEAEKLGFKR
FILPKYNMQGIDTKKLRIELVPVRKVEEAFRTLFG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagagaaaaccgtttatgtatgcagtaactgcggacaggaatcacccaaatgg
gtgggcaaatgtccttcgtgtggcgaatggaatacctatgtagaagagattgtccgcaag
gaagttccgaataaacgtccggtatctggcatcgaatcgcccaaagccaaacccgtcacc
ctgagcgagatcgaagcagatgaagaaccccgcatcgacatgcacgacgaggagctgaac
cgggtgctgggaggcgggctggtacccggatcgctggtactgatcggtggcgaacccggc
atcgggaagtccacactggtgctccaaaccgtgctccacatgcctgagcggaggatactc
tacatctcgggagaagagagcgcaaggcaactgaaacttcgtgccgaccggttaacccga
acttcgagcgactgtctgattgtctgcgaaacatcgttggaacagatctatgtacatatc
aagaatacacgtccggacctagtaatcatcgactccatacagacgatatcgaccgaaagc
atcgaatcgtcaccgggaagcatcgcgcaagtccgggagtgctcggcatccatcctccgt
tttgccaaagagacgcataccccggtgttgctgatcgggcatatcaacaaagaaggcagc
attgccggaccgaaggttctagagcacatcgtagacaccgtactccaattcgagggagac
cagcattatatgtaccgtatcctgcgcagcatcaagaaccgctttggaagtaccgctgaa
ttgggcatctatgaaatgcgtcaagacgggcttcgccaagtcagcaacccttcggaattg
ttactgtcgcaggaccacgaaggcatgagcggggtagccatcgcatctgccatcgaaggg
gtaagacccttcctgatagagacgcaagcacttgtcagctctgcggtttacggcaatccg
caacgttcggcaacgggattcgatattcgccgcatgaacatgctgctggccgtattagag
aaacgtgtcggatttaagctggcacaaaaagatgtctttctaaatattgccggaggactg
aaggttaacgaccctgccatcgacctggctgttatcagtgccatcctttcatccaatatg
gatgctgccatcgaacctgaggtttgcatggccggagaaatcggattatccggtgaaatc
cgtccagtaaaccggatcgaacaacgtatcggtgaagctgagaagctcgggttcaaacgg
ttcatcctacctaaatacaacatgcagggcatcgatacaaagaagctgaggatagaactg
gtgccggtaagaaaggtggaagaagcattccggacgctcttcgggtga
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