Bacteroides fragilis YCH46: BF0944
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Entry
BF0944 CDS
T00202
Name
(GenBank) putative outer membrane protein probably involved in nutrient binding
Organism
bfr
Bacteroides fragilis YCH46
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
STN
CarbopepD_reg_2
CarboxypepD_reg
FecR_C
AbiJ_NTD4
CooC_C
EF-hand_5
Dockerin_1
COX6C
DUF2505
Motif
Other DBs
NCBI-ProteinID:
BAD47694
UniProt:
Q64XT2
LinkDB
All DBs
Position
complement(1131298..1134615)
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AA seq
1105 aa
AA seq
DB search
MRKCNMRWFSPQRMKKHLAFALAVSLVAMVPVSAFAQVLKISMTKTNVSIENVLRELEKQ
SDYTFFYNDNQVKLNKKVSINVSDAPIETVLNEVFKNSGYTYKIVDNQIVVSTAAVTTNN
VQATQQQKQRKVSGIIKDTTGEPVIGASVVEKGNPTNGTITDIDGKFSLTVGGNELQVTY
IGYVPEIVSLKAGVSSYNITMKEDTKTLDEVVVVGYGVQKKANLTGSVSSINAEALESRS
VSSVSAAMAGTMPGVTAIQSSGAPGLQTGTITVRGKNSVNAANPLVIVDGVPGSMNTIDP
QDIESLTVLKDAASAAIYGVQAANGVILITTKKGKKGQDAKVSYSGSVAWATPTAKLNFL
GAADYAMLYNEAVKNENPNASLPYSDEDIELFRNGSDPIGHPNTDWYKETFKNFSFEQQH
NFSINGGSEKTNYSASVGYLYQGGLTNENDYNRFTGRINVESEISKWFSAGLNVSGYRGT
REDGAVGFATLMSEVTRNSPTLPVYNEDGTFNYSGKANPVAELGRTGFYRQMDQQLNAIL
HATVHILPELSVKGLFSVRNDIRNIDYFKKHYSYGSGSNISDSGLREGYDKYYIWNEYTS
QLLVNYNKSFQKHTIGALFGFEQWEQIYKYTEATRKGGGSDELTESLNTLDKSSQTNSDG
GTELARRSYFGRIQYDYADRYLFEANLRADASSRFPKDNRWGVFPAFSAGWRISEENFIK
DNLDWMSNLKLRLGWGRTGNEELSDIYPAVATYAYGSYMFGNTLNTTAYEARYVNSALQW
ATVTNYEIGLDAGFLNNKLGFELSVYKKKTDDMLLKLPVQGILGMSAPVQNAGSVENTGF
DLNIFHNNRINKDFSYAVNLNLAYVKNRITNLEGTEGEDPDNNKLWRLEGHPIGSFYGYK
AIGYFNTEEELANEPKRTGTEKLGDIKYADLNGDGKIDAANDRTVIGQNFPSWTGGLSIN
LFWKDFDFSALFQGAFDVDKYCEAESSYAFYNGGKVLKKHLDRWTPENHNASYPRITKDS
QTNFVTSSFWLEDGSYVRLKNVSLGYNLPKSWLNRIGVSRIKVYIAGENLLTFCGLEDID
PEESSTRGWSYTNVKKVSLGLKVSF
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaatgcaacatgcggtggtttagtccgcaaagaatgaaaaagcatctggctttt
gctttagcagttagcctggtagctatggtacctgtgagtgccttcgctcaagtactaaag
atttcaatgacaaagaccaatgtatccattgaaaatgtacttcgtgaacttgaaaaacaa
agcgattacactttcttctacaatgacaatcaggtaaaactgaacaagaaagtatccatc
aacgtatccgacgctccgatcgaaaccgtattgaacgaagttttcaaaaactcgggatat
acctacaagattgtagacaatcagatcgtagtgtctacagctgctgttacaactaataat
gtacaggcaacacaacagcaaaaacagagaaaagtttccggaatcatcaaagatactacc
ggcgaaccggttattggtgcatcggtagtagaaaagggtaatccaaccaatggtacgatt
actgatatcgatggaaaattcagtttaactgtaggaggtaacgaattgcaagttacttat
atcggctatgtgcctgaaatcgtttctttgaaagcgggagtaagttcttacaacataacc
atgaaagaagacaccaaaaccttggatgaagtagtggtggtaggttatggtgtacagaaa
aaggctaacttaacaggttctgtatcatctattaatgcagaagcgttggaatctcgttcc
gtatcgagtgtttctgctgcaatggccggaacaatgcccggtgtaacggctatccaatct
tccggtgctcccggattacagaccggtacgatcaccgtacgtggtaagaactcggtgaac
gctgccaatccattggttattgttgatggagttccgggtagtatgaatacaattgaccct
caagacattgaaagcctgacagtattgaaggatgctgcttctgccgctatctatggtgta
caagccgctaatggtgtaatccttatcacaacgaaaaaaggtaaaaaaggacaggatgcc
aaggtttcatattcaggtagcgtagcatgggcaaccccaaccgctaaactcaacttcctt
ggtgctgcagattatgctatgttatacaacgaagctgtgaaaaatgaaaatcccaatgcc
agtctgccttatagtgatgaagatattgaactcttccggaatggaagtgatcccatagga
caccccaatacggattggtataaggaaacattcaaaaatttttcttttgagcagcaacac
aatttctcaatcaatggtggatctgaaaagacaaactacagtgcatctgtcggttacctc
tatcagggtggtttaacaaacgaaaatgactacaatcgttttacaggtcgtatcaatgtt
gaatctgaaattagcaaatggttctcggcaggactgaatgtatccgggtatagaggaaca
cgtgaagacggtgccgtaggcttcgcaacacttatgagtgaggtaacccgtaatagcccg
acgttgccggtatacaatgaagacggtacatttaactatagtggaaaagccaaccctgta
gccgaattgggaagaaccggtttctaccgtcaaatggaccagcagttaaatgctatcctg
catgctactgtacatatcttaccggaattgagtgttaaaggattgttttcggtacgtaac
gatattcgtaatatcgattatttcaagaaacattattcttatggctcaggatccaatatt
tcggattccggtctgagagaaggatatgataaatattatatctggaatgagtatacttca
cagttattggtaaactacaacaaatctttccaaaagcacacgatcggtgcattgtttggt
tttgaacaatgggagcagatttataaatacacagaagcaacacgtaaaggtggtggtagt
gatgaactgaccgaatcattgaatacactggacaaatcatctcaaaccaactctgatggt
ggcacagaactagcccgccgttcatatttcggtcgtatccaatatgattatgccgacaga
tatttgtttgaagcaaacttacgtgcagatgcatcttcacgtttcccgaaagataatcgt
tggggtgtattccctgctttttctgccggatggagaatctcagaagagaacttcattaaa
gataatctggattggatgagtaatctgaagttacgtttgggttggggacgtaccggtaac
gaagagttgagcgatatctatcccgctgtagcaacttatgcttatggatcttatatgttc
ggtaacacactgaatacaactgcttatgaagccagatacgtaaacagtgcactccaatgg
gcaactgtaaccaactatgaaattggattagatgcaggattcttaaataacaaactcgga
ttcgagctttctgtttacaagaaaaaaacagatgatatgttattgaagctcccggtacaa
ggtattcttggtatgtcggcaccggttcagaacgcaggtagtgtagaaaatacaggtttc
gacttgaatattttccacaataatcgaatcaataaagattttagctatgcagttaattta
aacctcgcttatgtaaagaaccgcattacaaaccttgaaggaactgaaggagaagatcct
gacaataacaaattgtggcgtctggaaggtcatcctatcggttcattctatggttacaaa
gcaattggttactttaatacggaagaagaattggctaatgaacccaaacgtaccggtaca
gaaaaattaggtgatatcaaatatgccgatttgaatggtgacggtaaaatcgatgctgcc
aacgatcgtacagtaatcggacaaaacttcccaagttggacaggtggtttgagcattaat
ttattctggaaagactttgatttctctgctttgttccaaggtgcatttgatgttgataaa
tactgtgaagccgaatcttcatacgcattttataatggcggtaaagtgctgaaaaaacac
ttggatcgttggacaccggaaaaccacaacgcaagctatccgcgtattacaaaagattca
cagaccaacttcgtaacttcttctttctggttggaagatggctcatacgttcgtttgaaa
aacgtttcattaggctataacctacctaagagttggttgaacagaatcggtgtcagcaga
atcaaagtatacatagccggtgagaatttattgacattctgtggtcttgaagatattgac
ccggaagaatcgagcacacgtggatggtcatataccaacgtgaaaaaagtttcattaggc
ttaaaagtttcattctaa
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