Bacteroides fragilis YCH46: BF0958
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Entry
BF0958 CDS
T00202
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
bfr
Bacteroides fragilis YCH46
Pathway
bfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BF0958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfr03400
]
BF0958
DNA repair and recombination proteins [BR:
bfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BF0958
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
DUF2326
EIF3I
AAA_29
AAA_27
SbcC_Walker_B
RsgA_GTPase
DUF2813
Motif
Other DBs
NCBI-ProteinID:
BAD47708
UniProt:
Q64XR8
LinkDB
All DBs
Position
1159040..1160152
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AA seq
370 aa
AA seq
DB search
MILKRISILNYKNLEQVELNFSAKLNCFFGQNGMGKTNLLDAVYFLSFCKSAGNPIDSQN
IRHEQDFFVIQGFYEAMDGTPEEIYCGMKRRSKKQFKRNKKEYSRLSDHIGFIPLVMVSP
ADSELIAGGSDERRRFMDVVISQYDKEYLDALIRYNKALVQRNTLLKSEQPIEEELFLVW
EEMMAQAGEVVFRKREAFISEFIPIFQSFYSYISQDKEQVGLTYESHARNASLLEVLKES
RVRDKIMGYSLRGIHKDELNMLLGDFPIKREGSQGQNKTYLVALKLAQFDFLKRTGSTVP
LLLLDDIFDKLDASRVEQIVKLVAGDNFGQIFITDTNREHLDRILYKVGSDYKMFRVESG
AINEMEEKER
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgatactgaagcgtatatctatactgaactataagaacctggagcaggtagaactgaat
ttttcggctaaactgaattgctttttcgggcagaacgggatgggaaaaaccaatctgctc
gatgcggtctactttctgtctttttgtaaaagtgcaggaaatccgatcgattcgcagaat
attcgtcatgaacaggacttttttgttattcaagggttctatgaggcgatggacggaaca
cccgaagagatttattgcggaatgaagcgtaggtcgaaaaaacaattcaaacgtaataag
aaagaatattcgcgcctgtcggatcacatcggatttattcctttggtgatggtgtcgcct
gccgactcagaattgatagcggggggcagtgacgaacgtcgccgctttatggatgtagtc
atttcgcagtatgataaggagtatttggatgctttgattcgctacaataaggcattggta
caacgaaatacattgttgaagagtgaacaaccgatagaagaagagctttttctcgtttgg
gaagagatgatggcacaggccggtgaggtggttttccggaaacgggaagcatttatcagt
gagtttattcctatatttcaatcgttctactcgtacatttcgcaggataaggagcaagtg
ggactgacttatgagtcacacgcaagaaatgcatctctgcttgaagttctgaaagaaagc
cgggtacgggataagattatgggttattcgctccgggggatacataaagatgaactcaac
atgttgttgggtgactttcctattaagagagaaggttcacaaggacagaacaagacgtac
ctggttgcactgaagcttgcgcagtttgattttttgaagcgtacgggaagtacggtacct
ctgttgctgttggatgatatctttgacaaattggatgcttcgcgcgtagaacagattgta
aagttggtggcgggtgacaatttcgggcagattttcataacggatacgaatcgtgaacat
ttggaccgtatattatataaggtggggagtgactataaaatgtttcgtgtggagagcgga
gctatcaatgaaatggaggaaaaagagagatga
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