Bacteroides fragilis YCH46: BF1407
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Entry
BF1407 CDS
T00202
Name
(GenBank) putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
bfr
Bacteroides fragilis YCH46
Pathway
bfr04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BF1407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfr03016
]
BF1407
Enzymes [BR:
bfr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
BF1407
Transfer RNA biogenesis [BR:
bfr03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
BF1407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
PAPS_reduct
NAD_synthase
QueC
DUF7411
DUF3562
ThiI
Arginosuc_synth
Motif
Other DBs
NCBI-ProteinID:
BAD48158
UniProt:
Q64WG8
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All DBs
Position
1643190..1644251
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AA seq
353 aa
AA seq
DB search
MDIAALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCSAEEDIELSTAIARRY
GLALEVVDLHREYWDNVAAYAIEKIRKGQTPNPDVMCNKLIKFGCFEQQVGKDFDLTATG
HYATTLQLGGKTWLGTAKDPIKDQTDFLAQIDYLQVSKLLFPIGGLMKHEVREIALRAGL
PSARRKDSQGICFLGKINYNDFVRRFLGEKEGAVIEFETGKKIGTHRGYWFHTIGQRKGL
GLGGGPWFVVKKDIQDNIIYVSHGYDAEQQYGYEFRMKDFNFITDNPWEGSTGEEEVTFK
IRHTPEFIKGRLLHDEEGYRIISSEKLQGIAPGQFGVIYDAESRVCFGSGEIG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatatagcagcattattatcgggaggagtggacagttcggttgttgtacatctgctt
tgtgagcagggctacaagcctacactgttttacatcaaaataggtatggatggggcggaa
tacatggactgttctgccgaagaggatatagaactgtctactgccatagcccgacgctac
ggtttggcactggaggttgtcgatttacatcgggaatactgggataatgtggctgcttat
gccatagaaaagatacggaaggggcagactccgaatccggatgtgatgtgtaacaagctg
attaagtttggctgtttcgagcagcaggtcggaaaagatttcgatcttacggcaaccgga
cattatgctacgaccttgcaactaggcgggaaaacctggctgggtacagccaaggacccg
ataaaagatcagactgatttcctggcccagattgactatttgcaggtttcgaaattgttg
tttccgataggtgggctgatgaagcatgaagtgcgtgagatagcgttgcgggccggattg
cccagtgcccgtcggaaggatagtcagggaatttgctttttgggcaagataaattataac
gattttgtccgtcgctttctgggagaaaaagagggggcggtgatcgaatttgaaacaggt
aagaagattggtactcatcgcggctattggtttcataccattggccagcgaaaaggattg
ggattgggaggaggaccctggttcgttgtgaagaaggatattcaggataacattatttac
gtctcccacggttatgatgccgagcagcagtatggttatgaattcaggatgaaagacttc
aattttattacagataacccgtgggaaggctcgacaggcgaggaggaagtaacatttaag
atacggcatacacctgagtttatcaaaggccgtttgctacatgacgaagagggataccgg
attatttcttccgaaaaattacagggaattgcaccgggacagtttggcgtgatttatgac
gccgaatcccgggtttgtttcgggagtggagaaataggataa
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