Bacteroides fragilis YCH46: BF1806
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Entry
BF1806 CDS
T00202
Name
(GenBank) putative RNA binding protein with S1 RNA-binding domain
KO
K06959
protein Tex
Organism
bfr
Bacteroides fragilis YCH46
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
BF1806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
HHH_7
YqgF
T2SSK
HHH_5
S1_RRP5
HHH_6
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
BAD48553
UniProt:
Q64VC5
LinkDB
All DBs
Position
complement(2125341..2127464)
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AA seq
707 aa
AA seq
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MEIFHKMISAALNLPEKQISNTLRLLAEGATIPFISRYRKEITGGLDEVQIESIKTQYDK
LSELAKRKETILGTIGEQGKLTPELRQRIDATWDATALEDIYLPYKPKRKTRAEAARQKG
LEPLALLLMMQRENNLGPRIPAFVKGDVKDAEDALKGARDIIAEQVSEDERARNAVRNLF
ARQAVISAKVVKGKDEEAAKYRDYFDFSSPLKRCTSHRLLAIRRAEAEGLLKVSITPDDD
ECLERLDRQFVRSNNECGRQVAEAVQDAYRRLLKPSIETEFASLSKEQADDEAIRVFAEN
LRQLLLAPPLGQKRVMGIDPGFRTGCKVVCLDAQGNLVHNENIYPHPPVDKKTEAASKLR
KMIEAYKIEAIAIGNGTASRETENFVTHQQFDRPVQVFVVSEQGASIYSASKTARDEFPD
YDVTVRGAVSIARRLMDPLAELVKIDPKSIGVGQYQHDVDQAKLKKSLDQTVENCVNQVG
VNLNTASSHLLTYISGLGPQLAQNIVAYRAANGAFASRKELMKVPRMGAKAFEQCAGFLR
IAGGENPLDNTAVHPESYGIVQQMAKDLSCTVPQLIADKSLRTRIEIEKYITPTVGLPTL
KDILQELDKPGRDPRDTIQVFEFDRNVRTINDLREGMTLPGIVSNITNFGAFVDIGIKEN
GLVHLSQLANRFITDPTEVVSIHQHVTVKVLSIDLERKRIQLTMKEE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggaaatttttcacaaaatgatttcggcagcactcaacctgccggaaaagcagatcagt
aatactctcaggctgttagccgagggagccactatccctttcatcagccgctaccgtaaa
gaaatcaccggcggactcgacgaagtgcagatagaatctatcaaaacgcagtacgataaa
ctctcagaactcgccaaacgcaaagagaccattctcggcaccatcggcgagcaaggcaaa
ctgacgcctgagttgcggcaacgcatcgatgccacctgggatgccaccgctcttgaagat
atctacctgccctacaagcccaaacgcaagacccgcgccgaagccgcccgccagaaagga
ctcgaacctctggctctgctactgatgatgcagcgcgagaacaacctgggcccccgtatt
cctgcgttcgtcaaaggcgatgtcaaagacgcagaggacgctttgaaaggcgcccgcgac
attatcgccgagcaggtgagcgaagacgaacgtgcccgtaatgcagtgcgtaatctcttt
gcccgccaggctgtcatcagcgctaaagtagtgaagggtaaagacgaagaggccgccaaa
taccgggactatttcgacttctcttctcccttgaaacgctgcacctcccatcgcctgctg
gccatccgccgtgccgaggccgaaggtttgctgaaggtcagcattacccccgacgatgac
gaatgcctcgaacggctcgaccgccagtttgtccgtagcaataacgaatgtggccgccag
gtggcagaggccgtacaggatgcctaccgccgtctgctgaaaccttccatcgaaaccgaa
tttgcctccctcagtaaagaacaggccgatgacgaagcgatccgggtctttgccgaaaac
ctgcgccaactgcttcttgccccacccttgggacaaaaacgggtaatgggtatcgatccc
ggctttcgcaccggttgtaaggtggtctgcctcgatgcacaaggcaatctggtacacaat
gaaaacatctatcctcacccgccggtagacaagaaaaccgaagcggcttcgaaactccgc
aaaatgattgaagcttacaagatagaggccatcgccatcggtaacggaactgccagccgc
gaaacggaaaacttcgtcacgcaccaacagttcgaccgtcccgtacaggtctttgttgtc
agcgaacagggtgcttccatctactcggcctccaaaacggcccgtgacgagtttcccgat
tatgatgtcaccgtccgtggggccgtctccatcgctcgccggctgatggatccgctggcg
gaactggtcaagatcgatcctaagtccatcggtgtcggccaataccagcatgatgtagac
caggccaaattgaaaaaatcactcgaccagacagtggagaactgtgtcaaccaggtaggt
gtcaatctcaacacagccagcagtcatctgctcacctacatttccggtctgggtccgcaa
ctggcacagaacattgtagcctaccgcgctgccaacggtgcctttgcctcacgtaaagag
ttgatgaaagtgccccgcatgggagctaaagcttttgaacaatgcgccggattcctccgt
atcgccggaggagagaatccgttggacaacaccgctgtgcatcccgaaagttatgggatc
gtgcaacagatggccaaagatctgtcatgtactgttcctcaactgattgccgacaaatcg
ttgcgtacccgtatcgaaatagaaaagtatatcacccccaccgtaggactccctaccttg
aaggatattctgcaagaactcgacaaaccgggacgcgacccacgcgataccattcaggta
tttgagttcgaccgtaacgtgcgcaccatcaacgacctccgcgaagggatgactctaccc
ggtattgtcagcaacatcaccaacttcggagcttttgtcgatataggcatcaaggagaac
gggcttgtccatctctcccagcttgccaaccgattcatcaccgatcccaccgaagtggtc
tccattcaccaacacgtcacggtgaaagtactgagcatagacctcgaacggaaacggata
cagttgacgatgaaggaggagtaa
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