Bacteroides fragilis YCH46: BF1902
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Entry
BF1902 CDS
T00202
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfr
Bacteroides fragilis YCH46
Pathway
bfr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BF1902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfr03021
]
BF1902
Transcription machinery [BR:
bfr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF1902
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_ECF
Sigma70_r2
Sigma70_r4
HTH_23
HTH_38
GerE
NNF2_middle
HTH_28
DUF4174
Motif
Other DBs
NCBI-ProteinID:
BAD48650
LinkDB
All DBs
Position
complement(2238826..2239377)
Genome browser
AA seq
183 aa
AA seq
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MLNDVFILTQIKEGNIKAFETLFRQYYTPLRLYAASITGVPDVAEEIVEELFYVFWKDRE
KLEIFHSVKNYLYRSVRNRSIQYCEHQDVKRRYQDAILSVPVNIASPDPQEQIEYKELQQ
IINRTLEKLPERRLHIFRLHHTEGKKYSEIASLLSLSVKTVEKEMTRALRTLRKEIENYI
QIS
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacgacgtatttatacttactcaaataaaagaaggcaatataaaggcgtttgaa
acattattccgccaatattatactccgcttcgcctatacgccgccagcataacgggtgta
ccggacgtagccgaagaaatcgtcgaagaattgttctatgtattctggaaggatcgggaa
aaacttgagatttttcattctgtcaagaactatctctatcggtctgtacgtaaccgctct
atccagtattgcgaacatcaggatgtcaaaaggcgctatcaggatgcgattttatccgtt
ccggtaaatatagcttcacccgatccgcaagagcagattgagtacaaagaactgcaacaa
attataaaccgaacccttgagaaactaccggagcgccgtttgcatatcttccgactacac
cacacagaaggaaaaaagtattcggaaatagcctctctcctctcactatcggtaaaaact
gtagagaaagaaatgacccgggcactccggactttacgaaaagaaattgagaattatatc
cagatatcatga
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