Bacteroides fragilis YCH46: BF2204
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Entry
BF2204 CDS
T00202
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bfr
Bacteroides fragilis YCH46
Pathway
bfr00260
Glycine, serine and threonine metabolism
bfr00460
Cyanoamino acid metabolism
bfr00630
Glyoxylate and dicarboxylate metabolism
bfr00670
One carbon pool by folate
bfr00680
Methane metabolism
bfr01100
Metabolic pathways
bfr01110
Biosynthesis of secondary metabolites
bfr01120
Microbial metabolism in diverse environments
bfr01200
Carbon metabolism
bfr01230
Biosynthesis of amino acids
bfr01240
Biosynthesis of cofactors
bfr04981
Folate transport and metabolism
Module
bfr_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BF2204
09102 Energy metabolism
00680 Methane metabolism
BF2204
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BF2204
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BF2204
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BF2204
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BF2204
Enzymes [BR:
bfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BF2204
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BAD48951
UniProt:
Q64U78
LinkDB
All DBs
Position
complement(2573053..2574333)
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AA seq
426 aa
AA seq
DB search
MKRDDLIFDIIEKEHQRQLKGIELIASENFVSDQVMEAMGSCLTNKYAEGYPGKRYYGGC
EVVDQSEQIAIDRLKEIFGAEWANVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHLS
HGSLVNTSGIIYTPCEYNLKQETGRVDYDQMEEVALREKPKMIIGGGSAYSREWDYKRMR
EIADKVGAILMIDMAHPAGLIAAGLLDNPVKYAHIVTSTTHKTLRGPRGGVIMMGKDFPN
PWGKKTPKGEIKMMSQLLDSAVFPGIQGGPLEHVIAAKAVAFGECLQPEYKEYQKQVQKN
AAVLAQALIDRGFTIVSGGTDNHSMLVDLRSKYPTLTGKVAEKALVSADITVNKNMVPFD
SRSAFQTSGIRLGTPAITTRGAKEDLMLEIAEMIETVLSNVENEEVIAQVRARVNKTMEK
YPIFAY
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagacgatttaattttcgatattatcgaaaaagaacatcaacgtcagttgaaa
ggcattgagctgatcgcatcagaaaatttcgtaagtgatcaggtgatggaggcaatggga
tcttgtcttaccaataaatatgcggaaggatatccgggtaaacgctactatggtggctgt
gaagtggtagaccaaagcgaacaaattgccattgaccgcctgaaagagatttttggtgca
gaatgggccaatgtgcaaccccactcaggagcacaggctaatgcagccgtatttctggct
gtactgaatccgggagataaattcatggggctgaatctggcacatggaggacacctttca
catggttcattagtaaacacttcgggaatcatttatactccctgcgaatataatctgaaa
caggaaactgggcgcgtagattacgatcaaatggaggaagtagcattgcgtgaaaagccc
aaaatgatcattggaggcggttcggcctactctcgtgaatgggattataaacgtatgcgc
gaaattgccgacaaggtaggagcaattctcatgatcgacatggcacatcctgccgggtta
attgcagccggtctattggataatcctgtgaaatatgcacatattgtgacttcaaccact
cataagactctccgaggacctcgtggtggcgtaatcatgatgggaaaagactttcctaat
ccttggggaaagaaaactccgaaaggagaaattaagatgatgtctcaactacttgactca
gctgtattcccaggaatacaaggagggccgttggaacatgtgattgcagccaaagctgta
gctttcggtgaatgtttgcaacccgaatataaagaatatcaaaaacaggtacaaaagaat
gccgctgtattagcacaagccttgattgaccgtggtttcactattgtttcaggtggcaca
gataatcattccatgctggttgacttgcgtagtaaataccctactctaacaggtaaggtt
gcagaaaaagcactcgtatctgctgatataacagttaataaaaatatggttccgtttgat
agtcgttccgcattccagacttcaggtatccgtttgggtactcctgccatcacaacacgt
ggtgcaaaagaagatctgatgttggaaatcgccgaaatgatcgaaaccgtattatctaac
gtagaaaatgaagaagtgatagcacaagtacgtgcacgtgtcaataagacaatggaaaaa
tatccgatcttcgcatattaa
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