Bacteroides fragilis YCH46: BF2526
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Entry
BF2526 CDS
T00202
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bfr
Bacteroides fragilis YCH46
Pathway
bfr03420
Nucleotide excision repair
bfr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BF2526
03430 Mismatch repair
BF2526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfr03400
]
BF2526
Enzymes [BR:
bfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BF2526
DNA repair and recombination proteins [BR:
bfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BF2526
MMR (mismatch excision repair)
Other MMR factors
BF2526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
BAD49275
UniProt:
Q64TA4
LinkDB
All DBs
Position
complement(2906221..2908581)
Genome browser
AA seq
786 aa
AA seq
DB search
MPDYIEELNESQRAAVLYGDGPSLVIAGAGSGKTRVLTYKIAYLLENGYNPWNILALTFT
NKAAREMKERIARQVGEQRARFLWMGTFHSVFSRILRAEASHIGFTSQFTIYDSADSKSL
IRSIIKEMGLDEKTYKPGSVQARISNAKNHLVSPSGYAANKEAHEGDLAAKMPAIRDIYS
RYWERCRQAGAMDFDDLLVYTYILFRDFPDVLARYREQFRYVLVDEYQDTNYAQHSIVLQ
LTKENQRVCVVGDDAQSIYSFRGADIDNILYFTKIYPDTKVFKLEQNYRSTQTIVRAANS
LIEKNERQIPKEVFSEKERGEAIGVFQAYSDVEEGDIVTNKIAQLRREHDYEYSDFAILY
RTNAQSRVFEEALRKRGMPYKIYGGLSFYQRKEIKDIIAYFRLVVNPNDEEAFKRIINYP
ARGIGDTTVGKIITAATDNNVSLWTALCEPITYGLSINKGTHTKLQDFRALIEQFMADVT
VKNAYEIGTEIIRQSGIINEVCQDNSPENLSRKENIEELVNGMNDFCAMRQEEGNTNVSL
IDFLSEVSLLTDQDSDKEGDGEKVTLMTVHSAKGLEFRNVFVVGMEENLFPSGMAGDSPR
AMEEERRLFYVAITRAEEHCFLSFAKTRFRYGKMEFGSPSRFLRDIDTRFLQLPQEAALG
RSIDEGAGRFRREMEEGYSRRSSSERFSARPSADRPEREQPKAQIIAPTVPRNLKKVSGT
TLSPSSASGAGVAGVQPGQTIEHERFGLGEVIRVEGTGDNAKATIHFRNAGDKQLLLRFA
RFKVIE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcccgactatatcgaagaacttaatgaaagccagcgtgcggcggtgctctatggtgat
ggcccttcgctggtcatcgccggtgccggttccggaaagacgcgtgtgctcacttataag
atagcctatctgctcgagaacggttacaatccctggaatatcctggcactgactttcacc
aacaaagctgcccgtgaaatgaaggagcgtattgcccggcaggtgggcgagcagcgtgca
cgattcctttggatgggtacgttccattcggttttttcccgtattcttcgtgccgaggcg
tcccatatcggctttacgtcgcagttcaccatctacgattcggcggacagcaagagcctg
attcgttccatcatcaaagagatggggcttgacgagaagacctataagcccggcagtgtg
caggcacgcatctccaatgcgaagaaccacctggtgtctccttcgggatacgcagccaac
aaggaggcgcacgagggcgatcttgccgcaaagatgcctgccatacgggatatctacagc
cgctactgggagcgttgccgacaggccggagcaatggatttcgatgatctgctggtctat
acctatatccttttccgcgactttcccgacgtgctggcacgctatcgcgagcagttccgc
tatgtgcttgtcgacgagtatcaggacaccaactatgcacagcacagcatcgtgctgcaa
ctgacaaaggagaatcagcgtgtatgcgtggtgggcgacgacgcgcagagcatctactcc
ttcaggggagcggacattgacaatattttgtatttcaccaagatatatcccgataccaaa
gtcttcaagctggagcagaactaccgttccacccagaccattgtccgtgcggccaacagc
ctgatcgaaaagaacgagcggcagatccccaaagaggtgttctccgagaaggaacggggt
gaggccatcggggtctttcaggcttacagtgatgtggaagaaggcgacattgtgaccaat
aaaatagcgcaactgcgtcgcgagcacgattatgaatactccgacttcgccatcctttat
cgtaccaatgcccagagccgtgtcttcgaagaggctttgcgcaaacggggcatgccttat
aagatttacggcggcctctctttctatcagcgcaaggagatcaaagatatcatagcctac
ttccgcctggtggtcaaccccaatgacgaagaggcgttcaagcggattatcaattatccg
gcacgcggcattggcgataccacggtgggcaagattattactgccgccaccgataacaat
gtcagcctctggaccgcactctgcgaacccattacgtacgggctttccatcaataaaggc
acacataccaaattgcaggattttcgtgcgctgatcgagcagtttatggcagatgtgacc
gtaaagaatgcttatgaaataggtacggaaatcatccgtcagtccggcatcatcaatgaa
gtctgccaggacaattcgcccgagaatctcagccggaaagaaaacatcgaggaactggtg
aacggtatgaatgatttttgtgccatgcgtcaggaagaggggaacacgaacgtttctctg
atcgactttctctccgaagtatccctgctcaccgatcaggattccgacaaggagggagac
ggcgagaaggtgactctgatgacggtacattccgccaaaggactggagttccgcaacgta
ttcgtggtggggatggaagagaatcttttccccagcgggatggcgggcgattcaccccgt
gcgatggaagaggagcgacgcttgttctatgtagccatcacccgtgccgaagagcactgt
ttcctctcgtttgccaaaacccgtttccgttacggtaagatggagttcggcagccccagc
cgtttcttgcgggacatcgacacccgtttcctgcaacttccgcaggaggccgctttaggc
cggagcatcgacgaaggggccggccgcttccgccgcgagatggaagaggggtattcgcgc
cgttcgtcttccgaacgcttctctgcccgtccgtcggccgaccgtccggaacgcgaacag
ccgaaagcgcagatcatcgcgccgacggtcccccgtaacttgaaaaaggtaagtgggact
acgctctccccatcgtcggcttccggagccggcgtcgccggcgtacagcccggacagacc
atcgagcacgaacgcttcggcctgggtgaggtgatccgcgtagaaggtacgggcgacaat
gccaaagctaccattcatttccgtaatgcaggcgataaacagctgttgctgcgtttcgcc
agatttaaagtaatagaataa
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