Bacteroides fragilis YCH46: BF2540
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Entry
BF2540 CDS
T00202
Name
(GenBank) RNA pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
bfr
Bacteroides fragilis YCH46
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfr03009
]
BF2540
Enzymes [BR:
bfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
BF2540
Ribosome biogenesis [BR:
bfr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BF2540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Glyco_hydro_39
S4
DUF8772
MSC3_beta
Motif
Other DBs
NCBI-ProteinID:
BAD49289
UniProt:
Q64T90
LinkDB
All DBs
Position
2922262..2923185
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AA seq
307 aa
AA seq
DB search
MNMKRIKRTPAEKARAQYTGYLVKEPMELMDFLAAKMPDASRTKLKSLLSKRIVLVDNVI
TTQFNFPLQPGMKVLISKDKNKKEFRHPLLKIVYEDAYIIVVEKKEGLLSVGTERQKERT
AQHILSEYVGRSGRGNRIYVVHRLDRDTSGLMMFAKDEKTQYTLRDHWHDIVTDRRYVAV
VTGEIEKDSDTVVSWLTDRTLYVSSSSYDDGGSKSITHYRTIKRANGYSLVELRLETGRK
NQIRVHMQDLGHPLIGDGRYGIDGGPNPLGRLALHAFKLCFYHPVTDQLMEFETPYPPTF
KKLFLKK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaagagaatcaaacgaactccggccgagaaggcccgtgcacaatataccggc
tatctggtgaaagaaccgatggaattaatggatttccttgcggccaaaatgcccgatgcc
agccgtaccaagctaaagtctctgttgagcaaacgaatcgtgctggtcgacaatgtgatc
acaacacaattcaactttcctctgcaaccgggcatgaaggtgcttatcagcaaggacaag
aacaagaaagaattccgccatccgctactgaagatagtttacgaggacgcctatatcatc
gtagtggagaaaaaggaaggattgctttccgttggcacagagcggcagaaagaacgtact
gcccagcatattttaagcgaatatgtaggtcgttcgggacgcggaaaccgcatctacgtg
gttcatcgcctggaccgggatacttcgggattaatgatgtttgccaaagacgaaaagaca
caatacacgttgcgtgaccattggcacgacatcgtgacggaccgtcgctatgtagcggtg
gttaccggcgagatagagaaagacagcgacacggtagtgtcctggctgacagaccgtacc
ttgtacgtcagctcaagcagctatgatgatggcggttccaaatcgatcacccactatcgc
accatcaaacgtgccaatggctactcgctggtagaattgcgattggaaaccggacgtaag
aatcagatacgtgtacacatgcaggatctggggcatcctctgatcggagacggacgttat
gggatagacggtgggcccaatcctctcgggcgcctggctttgcatgctttcaaactttgt
ttctatcatccggtgacagatcagctaatggagtttgaaaccccttaccctcctacattc
aagaagctatttctgaagaaataa
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