Bacteroides fragilis YCH46: BF3049
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Entry
BF3049 CDS
T00202
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bfr
Bacteroides fragilis YCH46
Pathway
bfr00300
Lysine biosynthesis
bfr00470
D-Amino acid metabolism
bfr01100
Metabolic pathways
bfr01110
Biosynthesis of secondary metabolites
bfr01120
Microbial metabolism in diverse environments
bfr01230
Biosynthesis of amino acids
Module
bfr_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
bfr_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BF3049
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BF3049
Enzymes [BR:
bfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BF3049
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAD49795
UniProt:
Q64RT6
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All DBs
Position
complement(3446732..3447895)
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AA seq
387 aa
AA seq
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MKTVFPIHKFRELPTPFYYYDTKVLRDTLACVNREVARYDNFSVHYAVKANANPKVLTII
RESGLGADCVSGGEIRAAIKAGFPAGKIVFAGVGKADWEIDLGLDYDIFCFNVESVPELE
VINELAAAKGKVANVAFRINPNVGAHTHANITTGLAENKFGISMHDMDKVIDVALELKHV
KFIGLHFHIGSQILDMGDFIALCNRVNELQDKLEARHILVEHINVGGGLGIDYDHPNRQP
IPDFADYFRTYDEHLKLRPHQTLHFELGRAITGQCGSLISKVLYVKQGTNKQFAILDAGM
TDLIRPALYQAHHKMENLTSEDPVVETYDVVGPICESSDVFGKAVDLNKVKRGDLIALRS
AGAYGEIMASGYNCRELPKGYISEELV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgtattccccattcataaatttcgcgagttgccgactcctttctattattat
gatacgaaagtgcttcgcgacacgctggcgtgcgtcaaccgtgaggtggcacgttacgac
aatttcagtgtacactatgccgtcaaggccaatgccaatcctaaggtactgaccatcatc
cgcgaaagtggactgggtgccgattgtgtcagcggaggcgaaatccgcgctgccatcaag
gccggtttccctgccgggaagatcgtttttgccggagtcggtaaggctgattgggaaatc
gacctgggactcgattacgatattttctgtttcaatgtcgagtcggtgcctgagttggaa
gtcatcaacgagctggctgccgccaaaggtaaagttgccaatgtagctttccgcatcaat
cccaatgtaggtgcgcatacccatgccaatatcactaccggattggccgaaaacaaattc
ggtatcagcatgcacgatatggataaggtgatcgacgtggctttggagctgaagcatgtg
aagttcatcggtcttcatttccacatcggttctcagattctcgatatgggcgatttcata
gcgctatgcaaccgtgtcaacgaattgcaggataagctcgaagcccgtcacatccttgtg
gagcatatcaacgtaggcggtgggctgggcatcgattatgatcaccccaaccgtcagcct
attccggattttgccgactatttccgtacatacgacgagcacctgaagcttcgtccgcat
cagactttgcattttgagctgggacgtgccatcacgggacaatgcggttcgctgatttca
aaagtactttatgtcaagcaaggtaccaacaagcaatttgccatcctcgatgcgggcatg
accgatttgattcgtcctgccctctatcaggcacatcacaagatggagaaccttacttcc
gaagatcctgtggtcgaaacttatgacgtggtgggccccatctgtgagtcgtccgacgta
ttcggcaaggctgtcgatctgaataaggtgaagcgtggcgatctgatagccctgcgttct
gccggtgcttatggcgagattatggcttcaggctataactgccgtgaactgccgaaaggg
tacatctcagaggagttggtgtaa
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