KEGG   Bacteroides fragilis YCH46: BF3217
Entry
BF3217            CDS       T00202                                 
Name
(GenBank) putative signal recognition protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
bfr  Bacteroides fragilis YCH46
Pathway
bfr02024  Quorum sensing
bfr03060  Protein export
bfr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bfr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    BF3217
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BF3217
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BF3217
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bfr02044]
    BF3217
Enzymes [BR:bfr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     BF3217
Secretion system [BR:bfr02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   BF3217
  Eukaryotic Sec-SRP protein
   BF3217
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 CbiA AAA_33 SRPRB cobW AAA_17 APS_kinase AAA_31 AAA_24 AAA_18 nSTAND3 AAA_16 6PF2K MMR_HSR1 NACHT DO-GTPase1 TsaE KTI12 Fe-ADH AAA_30 ATPase AAA_14 KAP_NTPase AAA_19 NPHP3_N AAA_29
Other DBs
NCBI-ProteinID: BAD49962
UniProt: Q64RB9
LinkDB
Position
3648460..3649779
AA seq 439 aa
MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKGFTDTVKEKAL
GQNVLTAVKPSQLMVKIVHDELTQLMGGETVEIDTKGQPAVILMSGLQGSGKTTFSGKLA
RMLKTKKNKRPLLVACDVYRPAAIEQLRVLAEQIDVPMYSEIDSKDPVSIAQNAIKEARA
KGYDLVIVDTAGRLAVDEQMMNEIAAIKEAIQPNEILFVVDSMTGQDAVNTAKEFNERLD
FDGVVLTKLDGDTRGGAALSIRSVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIV
SLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQISQIKKMGNLKELASMIPGVGKAIK
DIDIDDNAFKSIEAIIYSMTPEERSNPGILNGSRRTRIAKGSGTTIQEVNRLLKQFDQTR
KMMKMVTSSKMGKMMPKMK
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgttcgacaatttaagcgaaagactcgaaaggtcgtttaagattctgaaaggtgaaggc
aaaatcaccgagatcaacgtagcagaaaccctgaaagacgtgcgcaaggcactgctcgat
gccgacgttaactataaagtagccaaaggattcactgatacggtgaaggaaaaggcactg
ggacagaacgtgctcacagccgtaaaaccgagccagttgatggtgaagattgttcatgac
gaactgacccagctgatgggtggagaaactgtcgaaatcgacaccaaaggtcagccggca
gtcatcctgatgtccggtttgcaaggttcgggtaagaccactttctcgggtaagctggcc
cgcatgctgaaaaccaagaagaacaaacgcccgttgctcgttgcatgtgacgtttaccgt
ccggcagctatcgagcagcttcgcgtactggccgaacagattgacgtaccgatgtactcg
gagatcgacagcaaagatccggtttccatcgcccagaatgccatcaaagaagcacgtgcc
aagggatacgatctggtaattgtcgatacggccggacgtctggcagtcgacgaacagatg
atgaatgagatcgctgccatcaaagaagccatccagcccaacgaaattctgttcgtggta
gactctatgaccggacaagatgcggtcaacacagccaaagagttcaacgaacgcctcgac
tttgacggcgtggtgctgaccaagctcgacggtgatacccgcggtggtgcggccctctct
atccgttcggtagtgaacaaacctatcaagtttgtaggtacgggcgagaaactcgatgcc
atcgaccagttccaccctgcccgtatggccgaccgtatcctgggtatgggtgacatcgtt
tcgttggtggaacgcgcacaggaacaatatgacgaagaagaagctaaacgcctccaaaag
aagattgccaagaaccaattcgacttcaacgacttcctcagccagatctcccagattaag
aaaatgggtaatctgaaagagctcgcttcaatgattccgggtgtgggcaaggccatcaaa
gatatcgatatcgacgacaacgctttcaaaagcatcgaagccatcatctactccatgact
ccggaggaacgcagcaatccgggcatcctgaacggttcgcgccgtacacgtatcgccaaa
ggtagcggtacgactatccaggaggtgaaccgtctgctgaaacagtttgaccagactcgc
aaaatgatgaagatggtgaccagcagcaagatgggcaagatgatgccgaagatgaaataa

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