Bacteroides fragilis YCH46: BF3936
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Entry
BF3936 CDS
T00202
Name
(GenBank) sialidase
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
bfr
Bacteroides fragilis YCH46
Pathway
bfr00511
Other glycan degradation
bfr00600
Sphingolipid metabolism
bfr01100
Metabolic pathways
bfr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
BF3936
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
BF3936
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
BF3936
Enzymes [BR:
bfr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
BF3936
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Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR_3
BNR_assoc_N
Tli3
Sortilin-Vps10
BNR
GINT1_N
DUF6359
Motif
Other DBs
NCBI-ProteinID:
BAD50678
UniProt:
Q64PA3
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All DBs
Position
complement(4483705..4485363)
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AA seq
552 aa
AA seq
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MRYISILFLLSCFLLSTPLRAERVKVIVRQPIVPVLTKKEINPVLQLKLIKSCPGPCFVK
EIGLSLKGTTLLTDLTHLSLYRVAGKRGLSDWEKCVDSVAPALKTVLDTPLELKSDTTIL
WVTVKLKDKVDLTHRVTVSCDHVTTTCGKASVTSVRPIVALRTGVAVRQRGEDGVHTSRI
PGITTSLKGTLMAIFDARYDSSRDLQGDIDIAMMRSLDGGMSWQPMQIVLDRKKWGGLPE
KYNGISDACILTDEKNGTIYVAGLWMYGVLDPRSGKWVEGMTQDSTRWIHQWHAKGSQPG
LGVKETCQFLITKSVDDGLTWSDPVNITAQTKKPEWWLYAPAPGHGITLKDGTLIFPTQG
RDKDGIPFSNITYSKDGGKTWIASKPAYHNTTECMAVELQDGSVMLNMRDNRNHGNKKVN
GRRICVTSDLGSTWTEHSTSRKALIEPTCMASIHRHTYQENGRQKTLLLFCNPESYDSRD
HMTLKCSLDDGNTWDSGRKIMLDELGSFGYSCITSVNDSTIGVFYESSQAQMVFQQIQLK
ELIGKGKSYKER
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatatttcgatattgtttttattgagttgttttttactcagtactccgttacgt
gccgagcgggtgaaagttattgttcgacagcccatagtaccggtcttgacaaaaaaggag
attaatccggttttgcaattaaagttgataaagagctgtccgggaccatgttttgtaaag
gagatcggattatccctgaaaggtactactttgttgaccgatttaactcatttgagttta
tatagagttgccggaaagagggggctttctgactgggaaaagtgtgtcgactcagttgct
cccgctttaaaaacggttttagacactccgttggaattgaaatcagatactaccatactg
tgggtaactgttaaattgaaagataaagttgacttaacccatcgtgtgacggtcagttgt
gatcatgtgacgacgacttgtggtaaggcttctgtaacttccgttcgtccgattgtcgca
ctccgtaccggagtcgctgtacggcaaagaggggaagacggagttcatacttcgcgtatt
cccggcattactacttccctgaaaggaactttgatggccatatttgatgcccgttacgat
agttcgcgtgacttgcaaggtgatatcgatattgcgatgatgcgaagcctggatggtgga
atgagctggcagccgatgcagatagtgctcgaccgcaaaaagtggggtggattgccagag
aaatataatggaatcagtgatgcttgtatcctgaccgatgaaaagaacggtactatttat
gtggcgggactctggatgtatggagtcttagatccccgatcgggtaaatgggtggaagga
atgacgcaggacagtacccgttggatacaccaatggcatgcgaaaggttctcagcccggg
ctcggggttaaagagacctgtcagttcttgattacgaaaagcgtggatgacggactgact
tggagtgaccctgtaaatataacagcacaaaccaagaaaccggaatggtggctgtatgct
ccggcaccggggcatggcattactttgaaagacggtacattaatatttcccacacaaggc
cgtgataaagatggaataccattctctaatattacgtatagcaaggatgggggaaaaaca
tggatagcctctaagccggcttatcacaacactacggagtgcatggcagtcgaattacag
gatggcagtgtcatgttgaatatgcgtgataaccgtaatcacggtaataaaaaggtcaat
ggacgccgtatttgtgtcacctccgatctgggaagcacatggacggaacattccacttcc
cgaaaagcattgatagagcctacttgtatggcaagtattcatcgacatacttatcaggaa
aacggcagacaaaagactcttcttctattctgcaatccggagtcttatgacagtagagac
cacatgacgctaaagtgcagcctggatgatggaaatacctgggattccggccggaaaatc
atgttggatgagttgggaagttttggctattcctgcataacttcggtcaatgattctacg
attggtgttttttatgaaagtagccaggcacagatggttttccaacaaatacagttgaaa
gagctcataggtaaaggtaaatcatataaagagagatag
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