Bacteroides fragilis YCH46: BF4001
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Entry
BF4001 CDS
T00202
Name
(GenBank) putative tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
bfr
Bacteroides fragilis YCH46
Pathway
bfr04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BF4001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfr03016
]
BF4001
Enzymes [BR:
bfr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
BF4001
Transfer RNA biogenesis [BR:
bfr03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
BF4001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Arginosuc_synth
QueC
Asn_synthase
NAD_synthase
ThiI
UPF0180
DUF7411
PAPS_reduct
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
BAD50743
UniProt:
Q64P39
LinkDB
All DBs
Position
complement(4572703..4573791)
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AA seq
362 aa
AA seq
DB search
MKESKKRVLVGMSGGIDSTATCLMLQEQGYEIVGVTMRVWGDEPQDARELAARMGIEHYV
ADERVPFKDTIVKNFIDEYRQGRTPNPCVMCNPLFKFRMLIEWADKLGCDWIATGHYSRL
EERNGHIYIVAGDDDKKDQSYFLWRLGQDVLRRCIFPLGNYTKQTVRDYLHEKGYEAKSK
EGESMEVCFIKGDYRDFLREQCPELDAEVGPGWFVSSEGVKLGQHKGFPYYTIGQRKGLE
IALGKPAYVLKINPQKNTVMLGDAGQLKAEYMVAEQDNIVDEDELFACPDLAVRIRYRSR
PIPCRVKRLEDGHLLVRFLAEASAIAPGQSAVFYEGRRVLGGAFIASQRGIGLVIEQNKD
WK
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaatccaagaagcgtgttcttgtcggtatgagtggggggatagacagcaccgcc
acctgcctgatgctgcaagagcagggatatgagatagtgggggtcaccatgcgtgtctgg
ggtgacgagccgcaggatgccagggagttggcggcacgtatggggatagagcattatgtg
gccgatgaacgcgttccttttaaagataccattgtcaaaaactttatagacgagtaccgt
caggggcgtacgccgaacccttgcgtgatgtgcaatccgttatttaagttccggatgttg
atagaatgggctgacaagctggggtgcgactggatagccaccggtcattactcccggttg
gaagagcggaacgggcatatctatatcgttgccggtgatgatgacaagaaagaccagtcc
tatttcctctggcgactgggacaggacgtgctgcggcgttgcatttttcctttgggtaac
tataccaagcagaccgtccgtgactatctgcatgagaaaggctatgaagccaagtcgaag
gaaggggagagtatggaggtatgctttattaaaggagactatcgcgattttcttcgcgaa
cagtgtccggagctggatgctgaggtaggtccgggatggtttgtcagttcagaaggtgta
aagctggggcagcacaaaggcttcccttattataccatcggacagcgtaaaggactggag
atcgcactgggaaaaccggcctatgtcttgaaaatcaatccccagaagaacaccgtcatg
ctgggtgacgccgggcagttgaaagccgaatacatggtggcggagcaagacaacattgtg
gatgaggatgaattgtttgcgtgtccggacctggcggtgcgcatccgttacagaagccgt
ccgattccttgccgggtgaagaggcttgaagacgggcatctgctggttcgtttcttggcg
gaggcgtcggcgattgctccggggcagtcggccgtgttttatgaaggccggcgggtgttg
ggtggtgcgtttatcgcttcgcaacgtggtatcgggttagtgattgaacagaacaaagac
tggaaatag
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