Bacteroides fragilis YCH46: BF4210
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Entry
BF4210 CDS
T00202
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bfr
Bacteroides fragilis YCH46
Pathway
bfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BF4210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfr03400
]
BF4210
Enzymes [BR:
bfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BF4210
DNA repair and recombination proteins [BR:
bfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BF4210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA_C
Cas3-like_C_2
nSTAND3
AAA_30
Zn_ribbon_6
IBR_1
Motif
Other DBs
NCBI-ProteinID:
BAD50953
UniProt:
Q64NH9
LinkDB
All DBs
Position
complement(4807114..4809573)
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AA seq
819 aa
AA seq
DB search
MKKYVDVILPLPLPRCFTYSLPDEGAEEVQIGCRVVVPFGRKKYYTAIVRNVHHYAPTEY
EVKEISTVLDTSPILLPGQFRFWEWLADYYLCTQGDVYKAALPSGLKLESETIVEYNPDF
EADAPLSEREQLVLDLLAKEPEQCVTKLEKESGLKNILTVIKSLLDKEALFVKEELRRTY
KPKTEARVRLAADASGEENLRRIFDELERAPKQLALLMKYVELSGVLGDGASKEVSKKEL
LQRASASPAIFNGLVEKQIFEVYYQEIGRLNRLVGKTVELNVLNEHQQRAYHEIMQSFQE
KNVCLLHGVTSSGKTEVYIHLIEETLRQGRQVLYLLPEIALTTQITERLKRVFGSRLGIY
HSKFPDAERVEIWQKQLTEEGYDIILGVRSSVFLPFRNLGLVIVDEEHENTYKQQDPAPR
YHARNAAIVLASMYGAKTLLGTATPSVETWQNATTGKFGWVELKERYKEIQLPEIIPVDI
KELHRKKRMTGQFSPLLLQYVREALDNKQQVILFQNRRGFAPMIECRTCGWVPKCKNCDV
SLTYHKGINQLTCHYCGYTYQLPRSCPACEGVELMHRGFGTEKIEDDVKLIFPEASVARM
DLDTTRTRSAYEKIIADFEQGKTDILIGTQMVSKGLDFDHVSVVGILNADTMLNYPDFRS
YERAFQLMAQVAGRAGRKNKRGRVVLQTKSIDHPIIRQVMTNDYEDMVAGQLAERQMFHY
PPYYRMVYVYLKNRNETLLDVMAHTMAEKLRALFGNRILGPDKPPVARIQTLFIRKIVVK
IEQNAPMSRARELLLRVQREMIEDERFKSLIVYYDVDPM
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtatgtagatgtcatattacctttgcctctgccccgttgctttacctattcc
cttccggacgaaggggctgaagaggtgcaaataggttgccgggtagttgtacctttcggg
cgaaagaagtactatacagccattgttcgcaatgtgcatcactatgcaccgaccgaatat
gaagtcaaagagatttctaccgtacttgacacctctccgatactgctgcccggtcagttc
cggttctgggaatggctggccgattattatctgtgtacgcagggtgatgtttacaaagcc
gcattgccttccggcctgaagttggagagcgagacgattgtggagtataatcccgacttc
gaggcggatgctcctctttctgaacgcgagcaactggtgctcgacctgcttgctaaagaa
cccgagcaatgtgtcaccaaacttgagaaagagagcggattgaaaaacattctcaccgtt
atcaagtcgctgctcgacaaggaagctctgtttgtaaaagaagagctccgccgcacctat
aaacccaaaacggaagcccgggtccggctggcggcagacgcttccggtgaagagaatctc
cggcgtatctttgacgagctggagcgcgctccgaaacagttggcgttgttgatgaagtat
gtggagctttccggcgtgttgggggacggtgcatccaaagaagtgtccaagaaagaactt
ctgcaacgtgcctctgcttctcccgctattttcaacggattggtagaaaaacagatattc
gaggtctattatcaggaaatcgggcggttgaaccgtttggtcggaaagacggtagaactg
aacgtgctgaacgagcaccagcaacgggcttatcatgaaatcatgcagagctttcaggag
aagaatgtctgtctgctccacggagtgacttccagtggaaagaccgaagtatacatccac
ctgatagaagagacgttgaggcaaggcaggcaggtgctttatctgttgcccgaaatagcg
ttgactacccagatcaccgaacggctgaaacgggtgttcggctcccggttgggaatctat
cactccaagttccccgacgccgagagagtagagatctggcaaaagcagttgacggaggag
ggttacgatattattctgggggtacgctcttcggtgttcctcccgtttcggaatctcgga
ctggtcattgtggacgaggaacacgaaaatacgtataagcaacaagatcccgcaccgcgc
tatcatgcccggaatgctgccatcgtgctggcttcgatgtatggggcaaagacgttgctg
ggtactgccactccttcggtggagacttggcagaatgccactaccggcaaattcgggtgg
gtggaactgaaagaacgctataaggaaattcaattgccggagattattccggtagatata
aaggagttgcaccgcaagaagcggatgacggggcagttctctccgttgctgctgcaatat
gtccgcgaggcactcgataataaacagcaggtgattctgtttcagaatcgccggggattt
gctccgatgatagagtgccgcacgtgcggatgggtgccaaagtgcaagaactgtgatgtc
agcctgacctatcataaaggtatcaatcagctgacttgccactattgcgggtatacttac
cagttgccccgttcgtgtccggcttgcgaaggggtcgagttgatgcacagaggatttggt
acggaaaagatagaagatgatgtgaagttgatttttccggaagcttccgtagcacgtatg
gatctcgatactacacgtacgcggtcggcatacgaaaaaattattgcagactttgaacag
ggaaagaccgatatactgatcggtacccagatggtatccaaaggactcgactttgaccac
gtcagcgtggtggggatactcaatgcggacacgatgctgaattatcccgatttccgttcg
tacgaacgtgccttccagttgatggcgcaggttgccggacgtgccggacgaaaaaataaa
cggggcagggtagtgttgcaaaccaaaagtatagaccatcccatcatccgtcaggtgatg
acgaacgattatgaagatatggtggcgggacaactggctgagcggcagatgtttcattat
cctccgtattaccggatggtgtatgtctatctgaaaaaccggaacgagacgttgcttgat
gtgatggcacacaccatggccgagaaactgcgcgcattgttcggaaaccggatactggga
ccggataaaccgcccgttgcccgtattcaaactttgttcatacgaaaaatagttgttaaa
atagaacaaaatgcgccgatgagtcgtgcccgtgaattacttttgcgggtacaacgtgaa
atgatagaagacgaacggtttaaatcgctgattgtttactatgatgtagatcctatgtaa
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