Bacteroides fragilis YCH46: BF4241
Help
Entry
BF4241 CDS
T00202
Name
(GenBank) IS21 family transposase
Organism
bfr
Bacteroides fragilis YCH46
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
TnsD
HTH_23
HU-CCDC81_euk_2
HTH_32
YneP
HTH_7
Motif
Other DBs
NCBI-ProteinID:
BAD50983
UniProt:
Q64NF0
LinkDB
All DBs
Position
complement(4834582..4836141)
Genome browser
AA seq
519 aa
AA seq
DB search
MEIRKQYFKEKQYMWHKVRELQLKGLNKTQIGIYLGVNRKTVRRYLNMTMEEFVKKQSSH
RKYRLKLENYEQYVRANLEEYPYISAARIHDWLKECYPDFPRVCNRTISGFVERVRKKYG
IGKKVETHKRNYEKQPDTPYGEYAQADFGEKCMRTENGKSIKVYFFAIVLSRSRYKFIYF
SRRPFDTGLAVYAHELAFEYFGGRPQKIIYDQDKVLIARANMGDLILTGKFQAFVKEQHF
HPVFCHKADPESKGRVENVVKYVKTNFLTARIFQNVDRLNEEARLWLERTGNGKEYGTTH
RIPLEEFAQEREYLVPYHGTPHSPGGEMKEYHVRKDNTVQYRGNYYSLPCGTYRGGETTV
WLHETDGCLELYNKETGKLVCRHDLCELKGKTIYGEGHRRQRNIGAQKLAERILIYVSYN
REVALWLENLQRRKERYYRENLEVILRIIPGYDKAILTEAVSVCLDKGIYNGESVKSLCG
HIWKKKMRESDVGKNPASRTQSTGLVKTYNEIFRNNGKV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaggaaacaatattttaaggagaaacaatatatgtggcataaagtaagggag
cttcagttgaaaggactgaacaaaacacaaattggaatatatctgggtgtgaaccgtaag
actgtacgacggtatctgaatatgactatggaggagtttgttaaaaaacaaagttctcac
cgcaagtacaggctgaaactggaaaactacgagcaatatgtacgtgcaaacctggaagaa
tacccgtatatatcggccgccaggatacatgactggctgaaggaatgctatccggacttc
ccccgtgtatgtaacagaaccatatccggtttcgtggaaagggtacgcaaaaaatacggc
atcgggaaaaaggttgaaacgcataagcgaaactacgagaagcagcctgatactccctac
ggggaatacgcacaggcggattttggggagaaatgtatgcgcactgaaaacgggaagtcc
atcaaagtgtacttctttgctattgtcctgtcccgttcacgatataaatttatctatttt
agccggaggccctttgacaccgggcttgcggtttatgcccatgaacttgccttcgaatac
ttcggaggcaggccgcaaaagatcatttacgaccaggataaagtacttatagcacgggcg
aacatgggggatttgatactgaccggcaaatttcaggcatttgtaaaagagcagcatttc
catcccgtgttctgtcacaaggccgatccggagtcaaaggggagggtagagaatgttgtg
aaatatgtgaagacgaatttcctcacggcacgtatttttcagaatgtagacagacttaat
gaagaagcacgtctctggcttgaaagaacgggaaacgggaaggaatatggtaccacacac
cggattccccttgaggaatttgcacaggaaagagaataccttgtaccctatcacggtact
ccgcactcacccggtggagaaatgaaggaatatcatgtacgtaaagacaataccgtacag
tacaggggaaactactatagcctgccatgcggaacctatcggggaggagaaacgacagta
tggctccatgaaacagacggatgcctggaactttataataaggagacgggaaagcttgtc
tgccggcatgatctgtgcgaactcaagggaaagactatctatggtgaaggacacagaagg
caaagaaatatcggagcacaaaagctggctgaacgcattcttatctatgtatcgtacaat
agagaggtcgccttatggcttgagaacctgcagagaaggaaggaacgttattacagggag
aatctggaggtaattctacgcataattcccggatatgacaaagccatcctgacagaagcg
gttagtgtatgtctggacaagggaatctataatggtgagtccgttaaaagcctgtgcgga
catatatggaagaagaaaatgagagaatcggatgtaggaaaaaatcctgcttcccggaca
cagtcaaccggattggtaaaaacatataatgaaatctttagaaacaatggcaaggtataa
DBGET
integrated database retrieval system
