Bacteroides fragilis YCH46: BF4379
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Entry
BF4379 CDS
T00202
Name
(GenBank) putative outer membrane protein probably involved in nutrient binding
Organism
bfr
Bacteroides fragilis YCH46
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
BAD51117
UniProt:
Q64N20
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Position
complement(4996964..4998943)
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AA seq
659 aa
AA seq
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MKKILLALLTSCALVSCEGYFDQLPKTELPSETFYTSYDAALRNVAILYANAGHVNDGIM
TSDRFMMPSLMNEGPFDLTSTSGSVLNLWSKHYAYIAQANLILERLETNKEVIDENAGHS
ALDKATITGSATEMLMGEVRFLRAYAYFTLYRYYGGVPLIIEPTGPKPDYVPRATRQEMF
KFLYDEMAYALDKCLDNRSGIAYGRVTKGAVAGMLAKMKIFHASYIRRAEMYGNKINETT
ADDVDKTTLYADAVKLCDDIIAGVYGTYKLEEYFPAVFTKRNNEIMFSVLAEEGVGTGNK
IPMGFAGEGKYGATGGRNLTSWLTLLYDIPMWEHNYSFKDVCMDYGQVDRFNAESPKPGT
TPYDLQNLYDRTGKYTITGDITRRMWSSVKGWVTGPNSGGAPIGLWVFEPAGRELGPEFY
IEPGKVNDYTEEQLKVMDVALESHERAWWKNETNGQNKPNLWNCNWWQLGKFRNLNPSEL
SSTFDINYGGVDYPVLRLAEIYLLKAEAQIMQGHVSEGVKTMNIIRDRACHQGSIKDMFV
SQGDAPYTYQPGSVMMIPTNISPANALKELMYERLRELAAEDDCGWLDVARFPDVSMVDL
ADICRYRDPLQFFDPFGDPARGEYLWHLFNEEKVYRVLMPIPFTELSFFPEMKQNPGYF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatattattagcccttttaacctcttgcgccttagtgtcgtgtgaggggtat
ttcgaccagttaccgaaaacagaacttccgtctgaaactttctatacttcctatgatgct
gctttacgtaatgtagctatattgtatgctaatgcagggcatgtcaatgatggaattatg
accagtgaccggtttatgatgccttcattgatgaatgaaggtccgttcgacctgacttcg
acatcgggtagcgtactgaatttgtggtcaaagcattatgcgtatattgcacaggcaaat
ctgatacttgagaggctggaaaccaataaagaggtgattgatgagaatgcaggacattct
gcattggataaagctacgatcaccggatcagctactgaaatgctgatgggagaagttcgt
ttcctccgggcttatgcttactttacattgtatcgttattatggcggtgtacctctgatt
atagagcctaccggaccgaagccggattatgtgccgcgagcaacccgccaagagatgttc
aagttcctctatgacgagatggcctatgcattggacaagtgtttggataaccgttcgggc
attgcttatggtcgtgttaccaaaggtgccgtagccggtatgttggcaaaaatgaaaata
ttccacgcttcttatatccgccgtgcagaaatgtatggaaacaagattaatgaaacaaca
gctgatgatgtagataagacaacgttatatgctgatgcagtgaagttgtgtgacgatatc
attgccggcgtgtacggaacttataagttggaagaatatttccctgctgtatttaccaaa
cgaaataacgagattatgttcagtgtattggcagaagaaggagtcggtacaggaaacaag
atacctatgggttttgccggtgaaggtaaatacggagcaaccggtggaagaaatcttact
tcgtggctgacgttgctgtatgatataccgatgtgggaacataattacagtttcaaggac
gtgtgtatggactatggccaggtagatcgtttcaatgccgaaagtccgaagcccggaacg
actccttatgacttgcagaatctctatgatcgtaccggaaagtacaccataaccggagac
attacccgtcgtatgtggagttcggtgaaaggctgggtaaccggtcctaacagtggtgga
gctcctatcgggttgtgggtgtttgaacctgccggacgtgaattaggccccgagttttat
attgagccgggtaaggtgaacgattacaccgaagaacagctcaaagtaatggatgtagct
cttgaaagtcatgaacgggcgtggtggaagaatgaaacgaatgggcagaacaagcctaac
ttgtggaactgtaattggtggcaattaggtaaattccgtaacctgaacccgagtgagttg
agttcaacctttgatattaattatggtggagtggactatcctgttttacgtttggcagag
atttacttgctgaaagcggaggcacaaatcatgcagggccatgtttcggaaggagtgaaa
acgatgaatattatccgtgatcgtgcttgccatcaaggatctattaaagatatgtttgtt
tctcagggagatgctccttatacttatcaaccgggttcggttatgatgattccgactaat
atcagtccggctaatgcactgaaagagttgatgtatgaacgtttacgcgaattggcagcc
gaggatgattgcggatggctcgatgtagcacgctttcctgatgtttcaatggttgacctg
gctgatatctgccgttatcgcgatcctctacaattctttgatccgtttggtgatccggcg
cgtggggaatacctttggcatctttttaatgaagagaaagtgtaccgtgtgctgatgccg
ataccgtttaccgagttatcgttcttcccagaaatgaaacaaaatccgggatatttttaa
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