Bacteroides fragilis YCH46: BF4422
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Entry
BF4422 CDS
T00202
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
bfr
Bacteroides fragilis YCH46
Brite
KEGG Orthology (KO) [BR:
bfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfr03032
]
BF4422
03036 Chromosome and associated proteins [BR:
bfr03036
]
BF4422
03400 DNA repair and recombination proteins [BR:
bfr03400
]
BF4422
DNA replication proteins [BR:
bfr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BF4422
Chromosome and associated proteins [BR:
bfr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BF4422
DNA repair and recombination proteins [BR:
bfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BF4422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
VWA_3
Motif
Other DBs
NCBI-ProteinID:
BAD51160
UniProt:
Q64MX7
LinkDB
All DBs
Position
complement(5057704..5057976)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKAELINAMAAESGLSKVDSKKALEAFFSSVTKALSAGDKISLVGFGTFSVAERSARMG
INPSTKKAIEIPAKKVAKFKPGAELTDAIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggctgaacttattaatgcaatggcagcggaatccggcttgagtaaagtggat
tctaagaaagcgcttgaagctttcttttcttcggttacaaaagctttgtcggctggtgac
aaaatttccttggttggatttggtacattctctgtagctgaaagatcagcaagaatggga
atcaatccttctaccaagaaggcaattgagattcctgcaaagaaagttgctaaatttaaa
ccgggtgctgagctgacagatgctataaaataa
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