Brachyistius frenatus (kelp perch): 138614209
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Entry
138614209 CDS
T10614
Name
(RefSeq) LOW QUALITY PROTEIN: neurofascin-like
KO
K06757
neurofascin
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
138614209
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bfre04515
]
138614209
Cell adhesion molecules [BR:
bfre04515
]
Immunoglobulin superfamily
L1 family
138614209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
Ig_4
Ig_VEGFR-1-like_5th
BiPBP_C
DUF3792
Med13_C
Motif
Other DBs
NCBI-GeneID:
138614209
NCBI-ProteinID:
XP_069543603
LinkDB
All DBs
Position
Unknown
AA seq
1385 aa
AA seq
DB search
MLRQGGHAALTLTLLLLLWREATPIEVPQDPKILQDLKQPPTIIKQSVKDYIVDPRDNII
IECEAKGNPVPTFSWRRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCYA
TNEFGIALSNWILLRVSKAPLWPKEVLEPVMVTEGSPLVLPCNPPPGXPSPFTFWMNSSM
SPIPLDKRVSMGLNGDLYFSNVLSQDAQTDYSCNARFTHTIQQKNPFTLRVQTKEQYNDT
SFNASDPLGGRKVAETTPTFLSPTGRESSKMVLRDEQLLLECIAAGLPTPTIKWFKKGGD
LPGRKVKFEKYNKTLKIINVSEEDAGEYVCMANNHLGSIRHSIFVQVKAAPYWLDRPTDL
VLAPDENGRLVCRANGNPKPNIQWLVNGQPIETAPPYPNRLILEDTIIFRLVQMGSSAVY
QCNASNQHGYLLANAFVSVLDMPPRMLGPKNQLIKVVENNRTFLECPFFGSPLPDLRWFK
NGQGSGLDGGHYRVYINGSLEIKRARAEDEGTYTCVASSILGKAENQVRLEVKEMMRIVR
APIDVSAIRGTTVQLDCKVKSDPSLPVTVTWTKDDKPLYLGWRLKKDGESLTINNVNEGD
EGTYTCSAKSEIDHDSASGRLTVLEEASLYPTVSSALPPDRPDPPMELDLSDPAARSIRL
TWIPGNDNRSPIKEFLVQFQEDRWEPGRWQDLSSYPGDLNSVILQLAPFVNYQFRVIAVN
SVGPSKPSQPSPWYKTSGAAPDAMPRGLRGWGSKKDNMEISWEPLLDLERNGPNLHYSVW
WRRKDLGEDWSNVTSVGSKHIVQNTETYVPYEIKIQARNDFGSGPESNVVTGFSGEDKPT
EAPKDLRVSKVDSTKANIHWKPVDLNSVLGEFKEYRLYFWRESSKVPGLVVSKEKKTKGF
FSTTADPSGLLSDLVPFSRYQMFMVAANSRYEGPPSNTVEFSTREGVPDAPKLFRINRRS
LDSLYLEWDKPLEPNGVLIGYQLKYRTVNGSRHGRLQLESFFPNVTEFSLRLPDRSTRYR
FYLAALTQVGSGEVVMEESPHSANEDNVTDATGLVDLTDASVSSALTPTAPPLAPLPPTT
VAPTTVSTSAATTSPTTAPPTTPPPTTTPPPTTTTTTTEATTTSTPPPPASTRRSDQNVF
VAPRLEIWNLTVEPNSNYANVSWRHTFPPGSSEFVLEFTLDSDKTVKVVSVKQQPPITVA
DLIAGADYHLRVYSHELNSISSKTIPFQTKAAYMDQVDIATQGWFIGLMCAIALIILILL
IVCFIKRSRGGKYPGGGYLAAFTECLVRDKKDLPLDPVDQKDQDGSFDYHSDEDNKPLQG
SQTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKDETEGNESSEATSPVNA
IYSLA
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggcagggcgggcatgcggccctgactctcacattactgctgcttctgtggcgc
gaggcgacgcccattgaagtcccacaagacccaaagatcctgcaggacctgaagcagccc
cccaccatcatcaaacagtcagtgaaggactacatcgtggacccccgagacaacatcatc
atcgagtgtgaggccaagggcaacccggtgccaacgttctcatggagacggaacgggaag
ttcttcaacatcgggaaagatcctcgcgtcaccatgaggaaacgctcaggaacgctggag
atcggcttccgcagcggaggacggcccgaagactacgagggagaataccagtgttacgca
accaacgagttcgggattgctctgtccaactggatcctgctgagggtctccaaggcccct
ctgtggcctaaagaggttctggagccggtgatggtgactgaaggttccccactggttctc
ccctgcaaccccccaccgggcnctccctcccccttcaccttctggatgaacagcagtatg
agtcccattcccctggataagagagtgtccatgggtttgaacggagacctgtacttctcc
aacgtcctctctcaggacgctcagacagactatagctgcaacgctcgcttcacacacacc
atccagcagaagaaccctttcacactccgagtgcagaccaaggagcagtataatgacaca
tcattcaatgcctctgacccgttgggtggtcggaaagtagccgagaccacgcccaccttc
ctctctccgacaggaagggagagctccaagatggtgctgcgagacgagcagctgctgctg
gagtgtatcgctgctggactgccgacgcccaccatcaagtggtttaagaagggcggcgac
ctgccgggacgcaaggtgaagtttgagaaatacaacaagaccctgaagatcatcaacgta
tcagaggaggacgccggagagtacgtctgcatggccaacaaccacctgggcagcatacgc
cactccatcttcgttcaggtcaaagcggctccctactggctggacagacctacggacctg
gtgctggccccggacgagaatggacgcctggtgtgtcgcgccaacggaaaccccaaaccc
aacattcagtggctggtcaacgggcagccaatagaaaccgcccccccctacccgaaccgt
ctgattctggaggacaccatcatcttccgcctggtgcagatggggagcagcgcggtgtac
cagtgcaacgcctccaaccagcacggctacctgctggccaacgccttcgtcagcgtcctc
gacatgcctccgaggatgctaggtcctaaaaaccagctgatcaaagtggtggagaacaac
cggaccttcctggagtgtccgttcttcggttctcctctgccggacctgcgctggtttaag
aacggacagggcagtgggctggacggagggcactaccgggtctacatcaacggctccctg
gagataaaacgggcccgagctgaggacgagggaacctacacctgtgtggccagcagcatc
ctgggcaaggccgagaaccaggtccgcctggaggtcaaagagatgatgcgtatcgtccga
gcccccatagacgtgtcagccatcagaggaaccacggtccagttggactgtaaggtgaag
tctgatcccagcctccctgtcacggtgacctggaccaaggacgacaagcctctgtacctg
ggatggaggctgaagaaggacggggagtctctgaccatcaacaacgtcaacgagggcgac
gagggaacgtacacctgcagcgccaaatctgagatcgaccacgactcagcatcgggccgc
ctcactgtgttagaggaagcctccctctaccccacagtctctagtgccttgcctccagac
cgtcctgacccacccatggagctggatctgtcggaccctgcagcccgcagcattcgcctc
acctggatccctggaaacgacaacaggagccccatcaaagagtttctggtccagttccag
gaggaccgctgggagccaggccggtggcaggacctgtcctcctaccccggagacctgaac
tctgtgatcctgcagctcgcccccttcgtcaactaccagttcagagtcatcgccgtcaac
tcggtgggaccgagcaagccgagccagccatcgccctggtacaagaccagcggagctgct
ccagatgccatgcccagaggacttcgagggtgggggtccaaaaaggacaacatggagatc
agctgggagcctcttctggacctggagagaaatggaccgaacctgcactacagcgtgtgg
tggagacggaaggacttgggggaggactggagcaacgtgacctcggtcgggtccaaacac
atcgtccagaacacagaaacctatgtgccttatgagatcaaaatccaggccaggaacgat
tttggatcaggaccagagtccaacgtggtcaccgggttctccggagaggacaaacccacc
gaggctcccaaggacctgcgggtgtccaaggtggacagcaccaaggccaacatccactgg
aagcccgtggacctgaattctgttctgggagagttcaaggagtacagactgtacttctgg
cgtgagtccagtaaggttccgggtctggtggtcagtaaggagaagaagaccaaaggtttc
ttcagcaccacggctgacccgtcgggcctcctcagcgatctggttccattctccaggtac
cagatgttcatggtggcggccaacagccgctacgagggtccgcccagcaacacggtggag
ttcagcaccagggaaggagttcctgatgcccccaaattgttcaggattaaccggaggagt
ctggactccctctacctggagtgggacaaacctctggagcctaacggcgttctgattgga
taccagctgaagtatcgcacagtcaatggttccaggcacggccgtctccagctggagtcg
ttctttcccaacgtgacggagttcagcctccgcctgccggaccggtccacccgctacagg
ttctacctggcggcgctgacccaggtgggatcgggggaggtggtcatggaggaatctcct
cactctgccaacgaggataacgttaccgatgctacaggtctagttgatcttaccgacgcc
tctgtgtcttcagctctcacccctactgctcctcctctcgctcctcttcctcccaccacc
gtcgccccgacaaccgttagtacctcagctgcgaccacttctccaacgaccgctcctcca
actacgccccctccgactacgactcctcctcctacgaccaccaccacgaccacggaggca
accacgacctctacccctcccccgccggcctccaccaggcgtagcgatcagaacgtgttt
gtggcccctcggctggagatctggaatctgacggtggagcctaacagtaactacgctaac
gtcagctggagacacaccttcccgcctggcagcagcgagtttgtgctagagttcacactg
gacagcgacaagacggtgaaagttgtgtcggtgaaacagcagcccccgatcactgtggcg
gatctgatcgccggggccgactaccacctgagagtttactcccacgagctcaacagcatc
agcagcaaaactatcccctttcagaccaaagcagcctacatggaccaggtagacatcgcc
actcagggctggttcatcggtttaatgtgtgccatcgcactcatcatcctcatcctcctc
atcgtgtgcttcatcaagaggagtcggggggggaaatatccaggtggaggttacctggcc
gctttcacagaatgtctcgtccgggacaaaaaggatctgcccctggacccggtggaccag
aaagaccaggatggatcctttgattaccacagcgatgaggacaacaagcctctgcagggc
agtcagacgtctctggacgggaacgtgaaggagagcgacgacagcctggtggactacggc
gagggcggcgacggccagttcaacgaggacggctccttcatcggccagtacacagtgaag
aaggacaaggacgagacggagggcaacgagagctccgaggccacctcacccgtcaacgcc
atctactcgctggcgtag
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