Brachyistius frenatus (kelp perch): 138614272
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Entry
138614272 CDS
T10614
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bfre Brachyistius frenatus (kelp perch)
Pathway
bfre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138614272 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfre03019
]
138614272 (hspd1)
03110 Chaperones and folding catalysts [BR:
bfre03110
]
138614272 (hspd1)
03029 Mitochondrial biogenesis [BR:
bfre03029
]
138614272 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfre04147
]
138614272 (hspd1)
Enzymes [BR:
bfre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
138614272 (hspd1)
Messenger RNA biogenesis [BR:
bfre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
138614272 (hspd1)
Chaperones and folding catalysts [BR:
bfre03110
]
Heat shock proteins
HSP60 / Chaperonin
138614272 (hspd1)
Mitochondrial biogenesis [BR:
bfre03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
138614272 (hspd1)
Exosome [BR:
bfre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
138614272 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
138614272 (hspd1)
Exosomal proteins of breast cancer cells
138614272 (hspd1)
Exosomal proteins of colorectal cancer cells
138614272 (hspd1)
Exosomal proteins of bladder cancer cells
138614272 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
138614272
NCBI-ProteinID:
XP_069543705
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MFRLPTVMRQMRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIELKDKFKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMMSVQTVINELKKLSKPVTTPEEIAQVATISANGDV
EIGTLISNAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLRDLAVATGGTVFGDEALGLTLEDIQAHDFGKVGEVQISKDDTLLLKG
GGSSAETEKRAAEIVEQLESTTSDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPSLDTVKAVNADQKIGVDIIRRALRIPAMTIA
KNAGVDGSLVVEKILQGSAELGYDAMLGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTEMPKEEKEMPGGMGGMGGMGGMGGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtttacccaccgtcatgaggcagatgaggccggtgagccgagcgcttgctcct
cacctcacacgagcctacgctaaagacgtgaagttcggtgctgatgctcgtgccctcatg
ctgcagggcgtggacctgctggctgacgccgtggccgtcaccatgggcccgaagggtcgc
actgtcatcatcgagcagagctggggcagcccgaaggtcaccaaggacggcgttacggtg
gccaagagcatcgagctgaaggacaagttcaagaacatcggtgccaaactggtgcaggat
gtggccaacaacaccaacgaggaagccggagacgggacgaccaccgccaccgtcctggct
cgtgccatcgccaaggaaggtttcgacaccatcagcaaaggagcaaaccccgtggagatc
cgccgaggcgtcatgatgtctgtgcaaactgtcatcaatgaactgaagaagctttcaaag
cccgtcaccaccccagaggagatcgcacaggttgctacgatctcagccaacggagacgtg
gagatcggcaccctcatatctaatgccatgaagaaagtcggccgcaaaggagtcataact
gtcaaggacgggaagacgttgcacgacgagctggagatcatcgagggcatgaagtttgac
cgtggttacatctcgccctacttcattaacactgctaaaggccagaagtgtgagttccag
gatgcctacctgcttctgagtgagaagaagatctccagtgtccagagcatcgtgccggcc
ctggaaattgccaaccagcaccgcaaaccgctggtgatcgtggctgaggacgtggacgga
gaggccctgagcaccttggtcctcaacaggctcaaggttgggcttcaggtagtcgctgtt
aaagctccaggtttcggtgacaacaggaaaaatcagctgagggatttggccgtcgccacc
gggggcactgtgtttggagatgaggcgctgggcttgaccctcgaggacatccaggctcac
gactttggcaaagtcggtgaggtgcagatcagtaaagatgacacgctgctgctgaaagga
ggcggcagctcagctgaaacggagaaacgggccgcggagatcgtggagcagctggagagc
accaccagtgactatgagaaggagaaactcaacgagaggctcgccaagctgtcggacgga
gtggccgtgctgaagatcggaggaacgagtgacgtggaggtgaacgagaagaaggaccgt
gtgacggatgctctgaacgccacccgggcagctgtggaggagggcatcgtaccggggggg
ggttgtgccctgctgcgctgcatcccttccctcgataccgtcaaagctgtcaatgctgac
cagaagatcggcgtggacatcatcagacgggcgctccgtattcctgccatgaccatcgcc
aagaacgccggtgtggacggttctctcgtggtggagaagatcctgcagggatcagctgag
ctgggctacgacgccatgctgggagagtacgtcaacatggtggagaagggcattatcgat
cccaccaaggtggtgaggacggccctgttggatgctgcaggagtcgcgtcgctgctttcc
actgctgaggccgttgtcacggagatgcccaaggaagagaaggaaatgccaggaggcatg
gggggcatgggcggaatgggcggcatgggcggcggcatgggtttctaa
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