Brachyistius frenatus (kelp perch): 138614440
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Entry
138614440 CDS
T10614
Name
(RefSeq) SR-related and CTD-associated factor 8-like isoform X1
KO
K13191
RNA-binding protein 16
Organism
bfre Brachyistius frenatus (kelp perch)
Brite
Transcription machinery [BR:
bfre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138614440
Spliceosome [BR:
bfre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
138614440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138614440
NCBI-ProteinID:
XP_069544011
LinkDB
All DBs
Position
Unknown
AA seq
1378 aa
AA seq
DB search
MTQITKSGIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGTEKDVFA
PRFSKNIIATFQHLYRCPSDDKSKIVRVLNLWQKNAVFKSDIIQPLLDMAAGIPPPSVTP
VMPSSAAPVNNTTPGTPATPATPANIVQGLPDWASQITNTDTVAAVAQILQSPQGQQLQQ
LVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQLTAAATANSLNPLEQRVSSFNKKLLG
PFDFGNDSERSEDSKKDSSSSQLPMVSEPINSSLFQHLAEQLQQQNLEQFQKQLMEHQQK
AMSIEGQDSIFGQENSVMSGQSSSQQQLSELDNKLDDSIDNQQQDMDLDEGPDGLEEEIF
EAEEKKALNTRSRTRSRSRSRSPKRRRSRSRSGSRKRKHRKRSRSRSRDRKRKSSRSYSS
ERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINM
IPPRGCAYICMVHRQDAYRARQKLSTGSFKIGSKIIKIAWALNKGVKQEYKQFWDVDLGV
TYIPWEKVKVDDLDGFAEGGIIDQETVNDEWEAAKNSEPAKEVTSQPVSAETSAASNTQT
ESYNQQVTMMPVQLPVAQAVPGAVGLVPPTFPVTMGIPPPGYGPPPPFIRAGFNTSQPPP
GYMQAAQAAGMAAAATSLVHSSVASSQDAVKDSPFSAMIPPTSALPGSFMSSAIAGAGVF
NPVGVHSQQAPNDKTPQSVDGMDAAAELTLQGMQNAVRSGMGLLGMHPTAPLTHPLHQAG
LSAQRMPGLLPLDVRPNLLQPGAAARFPLLMQQGAVQQAAGLLESSLQAQARARTPFPQL
DPFNRAPTLNNENLSKAEDESSSGADEGKDQDYRFPPMEKQSTGLLRTPPPEHRDALGGG
AGGGGAGAGVGGRPPLLQTPGTQPARSSLVGRLQALAGFTPDNRWNQARGDFDERDSMRG
GPPAPSGPKAFQEERSTSGQNFPNRFDSRPGTAGGAAGGSANAGAVGGSQTWNRSGAATA
TFDSELHQDLDDRRRPWDRQRDRDERDFDFRREMNGNRHSRERDRERGRDRDRTREHERD
RDRDKERDRERDRERGGWTPLLPLPTPLLPTPSLNPNLTLNQGKLLAPLKLNPQMQQRFQ
SPLLPPAQAKPSLLGLNQPPPQVQMKSPPPSQSQAAVSESQSEPPTPSETAQAQSPPSAQ
SPDPSSDNKAQSSSTEAPARSSPRSETPPPAESPSRSPSKTAASPDTDTPNRASPRDEVS
SPDSPVAFTLSASPPEDTTRSPEEQKNEEESHERASSHQPRWVNGSGIDDIAVAEPTPET
SPEPTPDPSHDSLLPESDKEPQQEQLASPQDVDSEQSEPTEEAASQPVVDTLTDTEGT
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgactcagatcaccaagtctggaatcaaggctatcaaattctacaaacatgttgtccag
agcgtagagaagttcatacaaaagtgcaagccagagtacaaggtcccggggctgtacgtc
atcgactccattgtcagacagtcacgacaccagtttggcaccgagaaagatgtttttgct
ccacgtttcagcaagaatatcattgcaacgttccagcacctctaccgctgcccctcagat
gataagagtaagatagttcgagtcctgaatctttggcaaaagaatgcggtcttcaagagt
gacatcattcagcctctgttggacatggcagcagggattcctcctcccagtgtcacgcct
gtaatgcccagcagtgctgccccggtcaacaacactacacctgggaccccagctacgccg
gccacgccagccaacatcgtccagggtctgcccgactgggcgtcgcagattaccaacacg
gacaccgtggctgctgttgcacaaatattacagagtccccagggacaacagcttcagcag
ctggtccagagtctgcagatgcagcagcagaagccccagccgtccctgctgcaggccttg
gacgctggcctggtggtgcagttacaagcgctgacagctcagctcactgcggctgcaact
gccaacagcctcaaccccttggagcagagagtctcctcctttaataagaaacttttgggt
ccgtttgactttgggaacgattctgaacgtagtgaagactctaaaaaggactcctcatca
tctcaactgcccatggtgtccgagcccattaacagctccctcttccaacatttggctgag
caactgcaacaacagaacctggagcagttccagaagcagctgatggagcaccagcagaag
gcaatgagcatagaagggcaggactccatctttggtcaggagaactcggttatgtcgggt
cagagcagcagccagcagcagctttctgagctcgacaataagttggacgactccatagac
aaccaacagcaggacatggatctggacgagggcccggacggattggaggaggagattttt
gaggcagaagagaagaaggccttaaacacgagatcaagaacacgctcaaggtcacgctcg
aggtctcccaagaggagaagatcccggtcccgctccggctcacggaaacgtaagcaccgc
aagcggtcccggtcccggtccagagaccgcaagaggaagtcgtcgcggtcctactcgagt
gaaagacgcgcccgcgaacgagagaaggagcggcagaagaaaggacttcctcccatacga
tccaagactctcagtgtgtgcagcacaactctgtgggtgggacaggtggacaaaaaggca
actcagcaagacctgaccaatctgtttgaagagttcggtcagatcgagtctatcaatatg
atccctcccagaggctgtgcctacatctgtatggtccacaggcaggatgcgtaccgggcc
cgccagaagctcagcacgggctctttcaaaattggttccaagatcatcaagattgcatgg
gctctgaacaaaggagtaaagcaggagtacaagcagttttgggatgtggacttgggagtg
acctacataccctgggagaaggtcaaggtggatgatctggacggctttgctgaaggaggg
atcattgaccaggagaccgtcaatgatgagtgggaagcagccaagaactctgaaccagcc
aaggaagttacaagtcagccagtaagcgctgagacttcagcagcatctaatacccaaact
gaaagctacaaccagcaggtcaccatgatgcctgtacagctcccagtggcccaggcggtc
cccggtgcagtaggtctggtgcctcctaccttccccgtcaccatgggaatacccccacca
ggctacgggccgccaccacccttcattcgagccggcttcaatacttcacagcctccacca
ggttatatgcaggctgctcaggcagcagggatggctgcagcagccacttctcttgtgcat
tcttcagtggcctccagccaagacgctgtgaaggattcaccgttcagcgctatgattcct
ccaaccagcgctctccctggcagcttcatgtcttcagccatcgcaggagctggtgtgttc
aacccggtgggagtgcacagtcagcaggcccccaacgacaagactcctcagtctgtagac
ggtatggatgcagctgcagagctcacactgcaaggtatgcagaatgcagtccgcagtggg
atgggtctgctgggcatgcaccctacagcccccctcacccacccgctgcatcaggcaggt
ctgagtgcacagagaatgcctggcctgctgccactggatgtgcgacctaacctcctccaa
cctggggccgctgcccgcttcccgctcctgatgcagcagggcgctgtccagcaggccgct
ggcctcctggaaagttccctccaggctcaagcccgtgccagaactcccttccctcagctg
gaccccttcaacagggccccgaccctcaacaacgaaaacctatctaaagcagaagacgag
tcttcctctggggctgacgagggcaaagaccaggactaccgcttccctccgatggagaag
cagagcacaggcctgctgcggacccctccaccagagcacagggatgcccttggaggagga
gcaggaggaggaggagcaggagcaggagtaggaggcagacctcccttgctccagaccccc
gggactcagccagccagatccagcctagtaggacgtctgcaggctcttgcaggctttact
cctgataatcgctggaaccaggccagaggggactttgacgaacgagatagcatgcgagga
ggcccgccggccccaagtggcccaaaagccttccaggaggagcgctccacctccgggcag
aacttcccaaatcgcttcgacagccgtccggggacagcgggaggagcagctggtggttct
gcgaatgccggagctgttggggggtcgcagacctggaaccgtagtggtgctgccacggct
acttttgatagtgaactacatcaagacctcgatgaccgaagacgcccgtgggaccggcaa
cgagatagagatgaaagagattttgactttcggagagagatgaacggtaaccgccacagc
cgtgagagagaccgggagcgaggccgagaccgagaccgcaccagagagcacgagcgtgac
cgagaccgggacaaagagagggaccgtgagagggaccgggaacgtggaggctggacgcct
ctcctcccgctgcccacacctctgcttccaactccatctcttaatcccaacctgactctg
aaccaaggcaaactgctcgccccgctcaaattaaaccctcagatgcagcaacgattccag
tccccgcttttgcctccagctcaggccaaaccttctctgctgggtctgaatcagccgccg
ccgcaggttcagatgaagtctcctcctccgtcacagagccaagcggctgtgtccgagtcc
cagtcagaacccccgactccatctgagacggctcaggcgcagtctccaccttcagctcag
tcacctgacccatcctctgacaacaaggctcagagcagctcgactgaagctcccgctcgg
tcgtcgcctcgatcagagaccccgcctcccgcagagtccccgtcccggtccccctccaag
acggctgcttctccagacactgacaccccaaaccgagcctcgccgcgggacgaggtttcg
tccccggactcacctgtggccttcacactatctgccagccctcccgaagatacgactcgc
tctccagaggagcagaagaacgaggaggagtcacacgagagagcctcctcgcaccagcca
cggtgggtcaatggatctgggatagacgatatcgccgtggccgagcccacgcccgagacc
tctcctgagcccactccagacccttcccatgattctttgctccctgaaagtgacaaggag
ccgcagcaggagcaacttgcctctcctcaggacgtagacagtgaacagagtgagcccacg
gaggaagctgcgagtcagccagtggtagacactctcacagacactgaggggacataa
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