KEGG   Brachyistius frenatus (kelp perch): 138614453
Entry
138614453         CDS       T10614                                 
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7
  KO
K10752  histone-binding protein RBBP4
Organism
bfre  Brachyistius frenatus (kelp perch)
Pathway
bfre03082  ATP-dependent chromatin remodeling
bfre03083  Polycomb repressive complex
bfre04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:bfre00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    138614453 (rbb4l)
   03083 Polycomb repressive complex
    138614453 (rbb4l)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    138614453 (rbb4l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bfre03036]
    138614453 (rbb4l)
Chromosome and associated proteins [BR:bfre03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     138614453 (rbb4l)
  Histone modification proteins
   HAT complexes
    HATB complex
     138614453 (rbb4l)
   HDAC complexes
    Sin3A-HDAC complex
     138614453 (rbb4l)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     138614453 (rbb4l)
    PRC2.2
     138614453 (rbb4l)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     138614453 (rbb4l)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    138614453 (rbb4l)
  Chromatin remodeling factors
   NuRD complex
    138614453 (rbb4l)
   NuRF complex
    138614453 (rbb4l)
   NuRF complex (fruit fly)
    138614453 (rbb4l)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_RIG_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st eIF2A Beta-prop_SPT8 Beta-prop_IFT140_1st MIOS_WD40 NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 138614453
NCBI-ProteinID: XP_069544028
LinkDB
Position
Unknown
AA seq 426 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKI
NHEGEVNRARYMPQNPCILATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLKGHQKEGY
GLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKVVDAKTIFTGHTAVVEDVSWHLLHES
LFGSVADDQKLMIWDTRSNNTSKASHAVEAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
GPPELLFIHGGHTAKISDFTWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPASE
LEAQGS
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggccgataaagaggtgtacgacgatgcggtggaggagcgggtgatcaacgaggagtac
aagatctggaagaagaacacgcccttcctgtacgacctggtgatgacccacgctctggag
tggcccagcctcacggtgcagtggctccccgacgtcaacaggccggaggggaaggactac
gccgtccaccggctggttctggggacacacacctcggatgagcagaaccacctggtgatc
gcaagcgtccaggtaccgaacgacgacgcccagttcgacgcctcgcactacgacagcgag
aaaggagagtttggagggtttggttcagtgagcggaaagattgagatcgagatcaagatc
aaccacgagggcgaagtgaaccgagcgcgctacatgccccagaacccctgcatcctcgcc
accaagacccccacctccgacgtgctggtgttcgactacaccaagcacccgtccaagcca
gatcccagtggggagtgcagtcctgacctgaggctgaaaggtcaccagaaagaaggctac
ggtctctcctggaacccgaacctgagcgggaacctcctcagcgcctctgatgaccacacc
atctgtctgtgggacatcggtgctggcccgaaggaggggaaggtggtggatgccaagacc
atcttcacaggccacaccgccgtggtggaggacgtctcctggcatctgctgcacgagtcc
ctgttcggctctgttgccgacgaccagaaactcatgatatgggacactcggtccaacaac
acgtccaaagccagccacgcggtggaggctcacactgctgaggtcaactgtctgagcttc
aacccctacagcgagttcatcctggccaccggttcagctgataagactgttgcattatgg
gatctcaggaatctcaaactgaagctgcactcctttgagtcccacaaagatgaaattttc
caggtgcagtggtcccctcacaacgagaccatcctggcctccagcggcaccgaccgccgt
ctcaacgtctgggacctcagtaaaatcggggaggagcagtcggcggaggacgctgaggac
ggacctccggagctgctgttcatccacggcggccacacggccaagatctctgacttcacc
tggaaccccaacgagccctgggtcatctgctccgtgtccgaggacaacatcatgcaagtg
tggcagatggcagagaatatctacaacgacgaggagcccgacaacacgcctgcatcagag
ctggaggctcagggatcataa

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